RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 C20orf203Q8NBC4 194 aa13.53□□□□□ -0.24
PKNOX1-202ENST00000418336 NAT8Q9UHE5 227 aa13.53□□□□□ -0.24
PKNOX1-202ENST00000418336 A0A1B0GUT8 65 aa13.52□□□□□ -0.25
PKNOX1-202ENST00000418336 PEA15Q15121 130 aa13.52□□□□□ -0.25
PKNOX1-202ENST00000418336 NUP35Q8NFH5 326 aa13.52□□□□□ -0.25
PKNOX1-202ENST00000418336 RMI2Q96E14 147 aa13.52□□□□□ -0.25
PKNOX1-202ENST00000418336 TMEM191AQ9H0A3 160 aa13.52□□□□□ -0.25
PKNOX1-202ENST00000418336 IGLV4-60A0A075B6I1 120 aa13.51□□□□□ -0.25
PKNOX1-202ENST00000418336 TRBV6-5A0A0K0K1A5 114 aa13.51□□□□□ -0.25
PKNOX1-202ENST00000418336 A0A1B0GUV1 79 aa13.51□□□□□ -0.25
PKNOX1-202ENST00000418336 KCNIP4Q6PIL6 250 aa13.51□□□□□ -0.25
PKNOX1-202ENST00000418336 FAM30AQ9NZY2 134 aa13.51□□□□□ -0.25
PKNOX1-202ENST00000418336 LINC00269Q8N2A0 174 aa13.5□□□□□ -0.25
PKNOX1-202ENST00000418336 TMEM243Q9BU79 118 aa13.5□□□□□ -0.25
PKNOX1-202ENST00000418336 SMIM27A0A1W2PRY6 76 aa13.49□□□□□ -0.25
PKNOX1-202ENST00000418336 RAB4AP20338 218 aa13.49□□□□□ -0.25
PKNOX1-202ENST00000418336 ADIRFQ15847 76 aa13.49□□□□□ -0.25
PKNOX1-202ENST00000418336 MIAQ16674 131 aa13.49□□□□□ -0.25
PKNOX1-202ENST00000418336 Q6ZSA8 131 aa13.49□□□□□ -0.25
PKNOX1-202ENST00000418336 RPS10P46783 165 aaKnown RBP13.48□□□□□ -0.25
PKNOX1-202ENST00000418336 C1orf43Q9BWL3 253 aa13.48□□□□□ -0.25
PKNOX1-202ENST00000418336 SDHAF1A6NFY7 115 aa13.47□□□□□ -0.25
PKNOX1-202ENST00000418336 COTL1Q14019 142 aa13.47□□□□□ -0.25
PKNOX1-202ENST00000418336 CLPSL2Q6UWE3 100 aa13.47□□□□□ -0.25
PKNOX1-202ENST00000418336 SMIM15Q7Z3B0 74 aa13.47□□□□□ -0.25
PKNOX1-202ENST00000418336 AMN1Q8IY45 258 aa13.47□□□□□ -0.25
PKNOX1-202ENST00000418336 TMEM70Q9BUB7 260 aa13.47□□□□□ -0.25
PKNOX1-202ENST00000418336 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.46□□□□□ -0.25
PKNOX1-202ENST00000418336 CRPP02741 224 aa13.46□□□□□ -0.25
PKNOX1-202ENST00000418336 AMTP48728 403 aa13.46□□□□□ -0.25
PKNOX1-202ENST00000418336 HAMPP81172 84 aa13.46□□□□□ -0.25
PKNOX1-202ENST00000418336 REG3AQ06141 175 aa13.46□□□□□ -0.25
PKNOX1-202ENST00000418336 NAT8BQ9UHF3 227 aa13.46□□□□□ -0.25
PKNOX1-202ENST00000418336 NCR2O95944 276 aa13.45□□□□□ -0.26
PKNOX1-202ENST00000418336 POLR2KP53803 58 aaKnown RBP13.45□□□□□ -0.26
PKNOX1-202ENST00000418336 BORCS7Q96B45 105 aa13.44□□□□□ -0.26
PKNOX1-202ENST00000418336 TSHBP01222 138 aa13.43□□□□□ -0.26
PKNOX1-202ENST00000418336 IFITM2Q01629 132 aa13.43□□□□□ -0.26
PKNOX1-202ENST00000418336 LINC01620Q4KN68 170 aa13.43□□□□□ -0.26
PKNOX1-202ENST00000418336 NRACQ8N912 160 aa13.43□□□□□ -0.26
PKNOX1-202ENST00000418336 MRAP2Q96G30 205 aa13.43□□□□□ -0.26
PKNOX1-202ENST00000418336 ESDP10768 282 aa13.42□□□□□ -0.26
PKNOX1-202ENST00000418336 RIGQ13278 110 aa13.42□□□□□ -0.26
PKNOX1-202ENST00000418336 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.41□□□□□ -0.26
PKNOX1-202ENST00000418336 TRBV27A0A0K0K1C4 114 aa13.41□□□□□ -0.26
PKNOX1-202ENST00000418336 A0A1B0GXF2 115 aa13.41□□□□□ -0.26
PKNOX1-202ENST00000418336 IGKV2-29A2NJV5 120 aaPredicted RBP13.41□□□□□ -0.26
PKNOX1-202ENST00000418336 USP17L23D6RBM5 183 aa13.41□□□□□ -0.26
PKNOX1-202ENST00000418336 SMKR1H3BMG3 65 aa13.41□□□□□ -0.26
PKNOX1-202ENST00000418336 I3L3M4 83 aa13.41□□□□□ -0.26
PKNOX1-202ENST00000418336 PRSS1P07477 247 aa13.4□□□□□ -0.26
PKNOX1-202ENST00000418336 IGLV10-54A0A075B6I4 117 aa13.39□□□□□ -0.27
PKNOX1-202ENST00000418336 H7C423 109 aa13.39□□□□□ -0.27
PKNOX1-202ENST00000418336 HLA-DQA1P01909 254 aa13.39□□□□□ -0.27
PKNOX1-202ENST00000418336 MRPL51Q4U2R6 128 aaKnown RBP13.39□□□□□ -0.27
PKNOX1-202ENST00000418336 CLLU1Q5K131 121 aa13.39□□□□□ -0.27
PKNOX1-202ENST00000418336 FAM104BQ5XKR9 115 aa13.39□□□□□ -0.27
PKNOX1-202ENST00000418336 ST20Q9HBF5 79 aa13.39□□□□□ -0.27
PKNOX1-202ENST00000418336 TRAV8-4A0A0B4J246 113 aa13.38□□□□□ -0.27
PKNOX1-202ENST00000418336 APCSP02743 223 aa13.38□□□□□ -0.27
PKNOX1-202ENST00000418336 TMEM242Q9NWH2 141 aa13.38□□□□□ -0.27
PKNOX1-202ENST00000418336 UBE2L6O14933 153 aa13.37□□□□□ -0.27
PKNOX1-202ENST00000418336 MYCBP2O75592 4640 aa13.36□□□□□ -0.27
PKNOX1-202ENST00000418336 SMR3BP02814 79 aaPredicted RBP13.36□□□□□ -0.27
PKNOX1-202ENST00000418336 FGF6P10767 208 aa13.36□□□□□ -0.27
PKNOX1-202ENST00000418336 PMCHP20382 165 aa13.36□□□□□ -0.27
PKNOX1-202ENST00000418336 EPM2AB3EWF7 344 aa13.35□□□□□ -0.27
PKNOX1-202ENST00000418336 CAMPP49913 170 aa13.35□□□□□ -0.27
PKNOX1-202ENST00000418336 C14orf177Q52M58 125 aa13.35□□□□□ -0.27
PKNOX1-202ENST00000418336 Q5VSD8 79 aa13.35□□□□□ -0.27
PKNOX1-202ENST00000418336 A0A1B0GW15 77 aa13.34□□□□□ -0.27
PKNOX1-202ENST00000418336 MRPL52Q86TS9 123 aaKnown RBP13.34□□□□□ -0.27
PKNOX1-202ENST00000418336 TRBV24-1A0A075B6N3 115 aa13.33□□□□□ -0.28
PKNOX1-202ENST00000418336 SLPIP03973 132 aa13.33□□□□□ -0.28
PKNOX1-202ENST00000418336 RAB14P61106 215 aa13.33□□□□□ -0.28
PKNOX1-202ENST00000418336 MRPL54Q6P161 138 aaKnown RBP13.33□□□□□ -0.28
PKNOX1-202ENST00000418336 ZNF25P17030 456 aaPredicted RBP13.32□□□□□ -0.28
PKNOX1-202ENST00000418336 ADCYAP1P18509 176 aa13.32□□□□□ -0.28
PKNOX1-202ENST00000418336 SUMO2P61956 95 aaKnown RBP13.32□□□□□ -0.28
PKNOX1-202ENST00000418336 HBBP68871 147 aa13.32□□□□□ -0.28
PKNOX1-202ENST00000418336 LINC00862A6NCI5 91 aa13.31□□□□□ -0.28
PKNOX1-202ENST00000418336 PNRC1Q12796 327 aaPredicted RBP13.31□□□□□ -0.28
PKNOX1-202ENST00000418336 SCXQ7RTU7 201 aa13.31□□□□□ -0.28
PKNOX1-202ENST00000418336 C15orf56Q8N910 161 aa13.31□□□□□ -0.28
PKNOX1-202ENST00000418336 SRRM2Q9UQ35 2752 aaKnown RBP13.31□□□□□ -0.28
PKNOX1-202ENST00000418336 VCYO14598 125 aa13.3□□□□□ -0.28
PKNOX1-202ENST00000418336 RPL32P62910 135 aaKnown RBP13.3□□□□□ -0.28
PKNOX1-202ENST00000418336 DGAT2L7PQ6IED9 249 aa13.3□□□□□ -0.28
PKNOX1-202ENST00000418336 RNASEKQ6P5S7 137 aaKnown RBP13.3□□□□□ -0.28
PKNOX1-202ENST00000418336 C9orf163Q8N9P6 203 aa13.3□□□□□ -0.28
PKNOX1-202ENST00000418336 CDC42SE2Q9NRR3 84 aa13.3□□□□□ -0.28
PKNOX1-202ENST00000418336 GAGE12HA6NDE8 117 aa13.29□□□□□ -0.28
PKNOX1-202ENST00000418336 PPP1R2P9O14990 202 aa13.29□□□□□ -0.28
PKNOX1-202ENST00000418336 PPP1R17O96001 155 aa13.29□□□□□ -0.28
PKNOX1-202ENST00000418336 CNBPP62633 177 aaKnown RBP13.29□□□□□ -0.28
PKNOX1-202ENST00000418336 AMMECR1LQ6DCA0 310 aa13.29□□□□□ -0.28
PKNOX1-202ENST00000418336 OR5A1Q8NGJ0 315 aa13.29□□□□□ -0.28
PKNOX1-202ENST00000418336 C20orf78Q9BR46 151 aa13.29□□□□□ -0.28
PKNOX1-202ENST00000418336 HERC1Q15751 4861 aa13.29□□□□□ -0.28
PKNOX1-202ENST00000418336 PKHD1L1Q86WI1 4243 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 164.8 ms