RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 DNAH8Q96JB1 4490 aa10.23□□□□□ -0.77
ITGB1-204ENST00000417122 A0A1B0GUV1 79 aa10.23□□□□□ -0.77
ITGB1-204ENST00000417122 HLA-DQA1P01909 254 aa10.23□□□□□ -0.77
ITGB1-204ENST00000417122 AMTP48728 403 aa10.23□□□□□ -0.77
ITGB1-204ENST00000417122 REG3AQ06141 175 aa10.23□□□□□ -0.77
ITGB1-204ENST00000417122 LINC01620Q4KN68 170 aa10.23□□□□□ -0.77
ITGB1-204ENST00000417122 TEX261Q6UWH6 196 aa10.23□□□□□ -0.77
ITGB1-204ENST00000417122 C20orf203Q8NBC4 194 aa10.23□□□□□ -0.77
ITGB1-204ENST00000417122 RPL39LQ96EH5 51 aaKnown RBP10.23□□□□□ -0.77
ITGB1-204ENST00000417122 GFRA4Q9GZZ7 299 aa10.23□□□□□ -0.77
ITGB1-204ENST00000417122 IGLV4-60A0A075B6I1 120 aa10.22□□□□□ -0.77
ITGB1-204ENST00000417122 FAM231BA6NCW3 169 aa10.22□□□□□ -0.77
ITGB1-204ENST00000417122 HIGD1CA8MV81 97 aa10.22□□□□□ -0.77
ITGB1-204ENST00000417122 UBE2L6O14933 153 aa10.22□□□□□ -0.77
ITGB1-204ENST00000417122 FAM74A3Q4VXF1 159 aa10.22□□□□□ -0.77
ITGB1-204ENST00000417122 A0A1B0GUT8 65 aa10.21□□□□□ -0.77
ITGB1-204ENST00000417122 TMEM241Q24JQ0 296 aa10.21□□□□□ -0.77
ITGB1-204ENST00000417122 Q6ZSA8 131 aa10.21□□□□□ -0.77
ITGB1-204ENST00000417122 ISOC2Q96AB3 205 aa10.21□□□□□ -0.77
ITGB1-204ENST00000417122 IGLV10-54A0A075B6I4 117 aa10.2□□□□□ -0.78
ITGB1-204ENST00000417122 C9JQL5 133 aa10.2□□□□□ -0.78
ITGB1-204ENST00000417122 USP17L23D6RBM5 183 aa10.2□□□□□ -0.78
ITGB1-204ENST00000417122 FAM229AH3BQW9 127 aa10.2□□□□□ -0.78
ITGB1-204ENST00000417122 RPL23P62829 140 aaKnown RBP10.2□□□□□ -0.78
ITGB1-204ENST00000417122 KRTAP26-1Q6PEX3 210 aa10.2□□□□□ -0.78
ITGB1-204ENST00000417122 V9GYV3 84 aa10.2□□□□□ -0.78
ITGB1-204ENST00000417122 TRAV8-4A0A0B4J246 113 aa10.19□□□□□ -0.78
ITGB1-204ENST00000417122 SDHAF1A6NFY7 115 aa10.19□□□□□ -0.78
ITGB1-204ENST00000417122 NCR2O95944 276 aa10.19□□□□□ -0.78
ITGB1-204ENST00000417122 SRSF3P84103 164 aaKnown RBP10.19□□□□□ -0.78
ITGB1-204ENST00000417122 PEA15Q15121 130 aa10.19□□□□□ -0.78
ITGB1-204ENST00000417122 TMEM191AQ9H0A3 160 aa10.19□□□□□ -0.78
ITGB1-204ENST00000417122 NAT8Q9UHE5 227 aa10.19□□□□□ -0.78
ITGB1-204ENST00000417122 FAT1Q14517 4588 aa10.19□□□□□ -0.78
ITGB1-204ENST00000417122 APCSP02743 223 aa10.18□□□□□ -0.78
ITGB1-204ENST00000417122 INAFM2P0DMQ5 153 aa10.18□□□□□ -0.78
ITGB1-204ENST00000417122 ADIRFQ15847 76 aa10.18□□□□□ -0.78
ITGB1-204ENST00000417122 NUP35Q8NFH5 326 aa10.18□□□□□ -0.78
ITGB1-204ENST00000417122 SMDT1Q9H4I9 107 aa10.18□□□□□ -0.78
ITGB1-204ENST00000417122 TRBV6-5A0A0K0K1A5 114 aa10.17□□□□□ -0.78
ITGB1-204ENST00000417122 I3L3M4 83 aa10.17□□□□□ -0.78
ITGB1-204ENST00000417122 GAS8-AS1O95177 125 aa10.17□□□□□ -0.78
ITGB1-204ENST00000417122 PRSS1P07477 247 aa10.17□□□□□ -0.78
ITGB1-204ENST00000417122 RIGQ13278 110 aa10.17□□□□□ -0.78
ITGB1-204ENST00000417122 RNF185Q96GF1 192 aa10.17□□□□□ -0.78
ITGB1-204ENST00000417122 RAB4AP20338 218 aa10.16□□□□□ -0.78
ITGB1-204ENST00000417122 PMCHP20382 165 aa10.16□□□□□ -0.78
ITGB1-204ENST00000417122 AMMECR1LQ6DCA0 310 aa10.16□□□□□ -0.78
ITGB1-204ENST00000417122 AMN1Q8IY45 258 aa10.16□□□□□ -0.78
ITGB1-204ENST00000417122 ST20Q9HBF5 79 aa10.16□□□□□ -0.78
ITGB1-204ENST00000417122 NAT8BQ9UHF3 227 aa10.16□□□□□ -0.78
ITGB1-204ENST00000417122 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.15□□□□□ -0.78
ITGB1-204ENST00000417122 IGKV2-29A2NJV5 120 aaPredicted RBP10.15□□□□□ -0.78
ITGB1-204ENST00000417122 H7C423 109 aa10.15□□□□□ -0.78
ITGB1-204ENST00000417122 DGAT2L7PQ6IED9 249 aa10.15□□□□□ -0.78
ITGB1-204ENST00000417122 MRAP2Q96G30 205 aa10.15□□□□□ -0.78
ITGB1-204ENST00000417122 RNASEKQ6P5S7 137 aaKnown RBP10.14□□□□□ -0.79
ITGB1-204ENST00000417122 SCXQ7RTU7 201 aa10.14□□□□□ -0.79
ITGB1-204ENST00000417122 CLRN3Q8NCR9 226 aa10.14□□□□□ -0.79
ITGB1-204ENST00000417122 VPS13BQ7Z7G8 4022 aa10.14□□□□□ -0.79
ITGB1-204ENST00000417122 IGKV3OR2-268A0A0C4DH90 116 aa10.13□□□□□ -0.79
ITGB1-204ENST00000417122 SMIM27A0A1W2PRY6 76 aa10.13□□□□□ -0.79
ITGB1-204ENST00000417122 FGF6P10767 208 aa10.13□□□□□ -0.79
ITGB1-204ENST00000417122 RPS10P46783 165 aaKnown RBP10.13□□□□□ -0.79
ITGB1-204ENST00000417122 CHAC1Q9BUX1 264 aa10.13□□□□□ -0.79
ITGB1-204ENST00000417122 TSHBP01222 138 aa10.12□□□□□ -0.79
ITGB1-204ENST00000417122 POLR2KP53803 58 aaKnown RBP10.12□□□□□ -0.79
ITGB1-204ENST00000417122 LINC00528Q8N1L1 170 aa10.12□□□□□ -0.79
ITGB1-204ENST00000417122 C9orf163Q8N9P6 203 aa10.12□□□□□ -0.79
ITGB1-204ENST00000417122 TMEM242Q9NWH2 141 aa10.12□□□□□ -0.79
ITGB1-204ENST00000417122 hDV102S1A0JD36 115 aa10.11□□□□□ -0.79
ITGB1-204ENST00000417122 SMKR1H3BMG3 65 aa10.11□□□□□ -0.79
ITGB1-204ENST00000417122 ESDP10768 282 aa10.11□□□□□ -0.79
ITGB1-204ENST00000417122 ZNF25P17030 456 aaPredicted RBP10.11□□□□□ -0.79
ITGB1-204ENST00000417122 TRBV27A0A0K0K1C4 114 aa10.1□□□□□ -0.79
ITGB1-204ENST00000417122 GAGE12HA6NDE8 117 aa10.1□□□□□ -0.79
ITGB1-204ENST00000417122 PLA2G1BP04054 148 aaKnown RBP10.1□□□□□ -0.79
ITGB1-204ENST00000417122 CIRBP-AS1Q8TBR5 109 aa10.1□□□□□ -0.79
ITGB1-204ENST00000417122 BTF3L4Q96K17 158 aa10.1□□□□□ -0.79
ITGB1-204ENST00000417122 PPP1R17O96001 155 aa10.09□□□□□ -0.79
ITGB1-204ENST00000417122 CAMPP49913 170 aa10.09□□□□□ -0.79
ITGB1-204ENST00000417122 FAM104BQ5XKR9 115 aa10.09□□□□□ -0.79
ITGB1-204ENST00000417122 NRACQ8N912 160 aa10.09□□□□□ -0.79
ITGB1-204ENST00000417122 TMEM101Q96IK0 257 aa10.09□□□□□ -0.79
ITGB1-204ENST00000417122 A0A1B0GW15 77 aa10.08□□□□□ -0.8
ITGB1-204ENST00000417122 VCYO14598 125 aa10.08□□□□□ -0.8
ITGB1-204ENST00000417122 CNBPP62633 177 aaKnown RBP10.08□□□□□ -0.8
ITGB1-204ENST00000417122 MRPL51Q4U2R6 128 aaKnown RBP10.08□□□□□ -0.8
ITGB1-204ENST00000417122 OR5A1Q8NGJ0 315 aa10.08□□□□□ -0.8
ITGB1-204ENST00000417122 CHCHD10Q8WYQ3 142 aaPredicted RBP10.08□□□□□ -0.8
ITGB1-204ENST00000417122 AP5S1Q9NUS5 200 aa10.08□□□□□ -0.8
ITGB1-204ENST00000417122 C7orf77A4D0Y5 90 aa10.07□□□□□ -0.8
ITGB1-204ENST00000417122 SUMO2P61956 95 aaKnown RBP10.07□□□□□ -0.8
ITGB1-204ENST00000417122 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.06□□□□□ -0.8
ITGB1-204ENST00000417122 LINC00862A6NCI5 91 aa10.06□□□□□ -0.8
ITGB1-204ENST00000417122 PPP1R2P9O14990 202 aa10.06□□□□□ -0.8
ITGB1-204ENST00000417122 FCER1GP30273 86 aa10.06□□□□□ -0.8
ITGB1-204ENST00000417122 RAB14P61106 215 aa10.06□□□□□ -0.8
ITGB1-204ENST00000417122 MRPL54Q6P161 138 aaKnown RBP10.06□□□□□ -0.8
ITGB1-204ENST00000417122 CFAP161Q6P656 301 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms