RNA–Protein interactions for RNA: ENST00000415051.5

UBE2D4-202, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-202ENST00000415051 MAP1LC3B2A6NCE7 125 aa10.42□□□□□ -0.74
UBE2D4-202ENST00000415051 PTTG1IPP53801 180 aa10.42□□□□□ -0.74
UBE2D4-202ENST00000415051 Q5BKY6 102 aa10.42□□□□□ -0.74
UBE2D4-202ENST00000415051 CARD19Q96LW7 228 aa10.42□□□□□ -0.74
UBE2D4-202ENST00000415051 MAP1LC3BQ9GZQ8 125 aa10.42□□□□□ -0.74
UBE2D4-202ENST00000415051 IGLC6P0CF74 106 aa10.41□□□□□ -0.74
UBE2D4-202ENST00000415051 CACNG7P62955 275 aa10.41□□□□□ -0.74
UBE2D4-202ENST00000415051 COTL1Q14019 142 aa10.41□□□□□ -0.74
UBE2D4-202ENST00000415051 LINC00299Q6ZSB3 139 aa10.41□□□□□ -0.74
UBE2D4-202ENST00000415051 STOML3Q8TAV4 291 aa10.41□□□□□ -0.74
UBE2D4-202ENST00000415051 MED28Q9H204 178 aa10.41□□□□□ -0.74
UBE2D4-202ENST00000415051 NIT2Q9NQR4 276 aa10.41□□□□□ -0.74
UBE2D4-202ENST00000415051 TRAV26-2A0A0B4J265 109 aa10.4□□□□□ -0.74
UBE2D4-202ENST00000415051 BAGE2Q86Y30 109 aa10.4□□□□□ -0.74
UBE2D4-202ENST00000415051 S100ZQ8WXG8 99 aa10.4□□□□□ -0.74
UBE2D4-202ENST00000415051 SCO2A0A1W2PP80 73 aa10.39□□□□□ -0.75
UBE2D4-202ENST00000415051 PAGE4O60829 102 aa10.39□□□□□ -0.75
UBE2D4-202ENST00000415051 PKIGQ9Y2B9 76 aa10.39□□□□□ -0.75
UBE2D4-202ENST00000415051 S100A9P06702 114 aaKnown RBP10.38□□□□□ -0.75
UBE2D4-202ENST00000415051 PRR4Q16378 134 aa10.38□□□□□ -0.75
UBE2D4-202ENST00000415051 AKR1C8PQ5T2L2 129 aa10.38□□□□□ -0.75
UBE2D4-202ENST00000415051 IGHV1-58A0A0C4DH39 117 aa10.37□□□□□ -0.75
UBE2D4-202ENST00000415051 MT-ND6P03923 174 aa10.37□□□□□ -0.75
UBE2D4-202ENST00000415051 XCL1P47992 114 aa10.37□□□□□ -0.75
UBE2D4-202ENST00000415051 SYCNQ0VAF6 134 aa10.37□□□□□ -0.75
UBE2D4-202ENST00000415051 GAGE2BQ13066 116 aa10.37□□□□□ -0.75
UBE2D4-202ENST00000415051 C1orf137Q5JT78 98 aa10.37□□□□□ -0.75
UBE2D4-202ENST00000415051 Q6ZNX1 250 aa10.37□□□□□ -0.75
UBE2D4-202ENST00000415051 TPPP3Q9BW30 176 aa10.37□□□□□ -0.75
UBE2D4-202ENST00000415051 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.36□□□□□ -0.75
UBE2D4-202ENST00000415051 IGKV2-29A2NJV5 120 aaPredicted RBP10.36□□□□□ -0.75
UBE2D4-202ENST00000415051 NTF3P20783 257 aa10.36□□□□□ -0.75
UBE2D4-202ENST00000415051 FER1L6-AS1Q8NA97 138 aa10.36□□□□□ -0.75
UBE2D4-202ENST00000415051 BORCS7-ASMTA0A0B4J1R7 106 aa10.35□□□□□ -0.75
UBE2D4-202ENST00000415051 KRTAP1-4P0C5Y4 121 aa10.35□□□□□ -0.75
UBE2D4-202ENST00000415051 PHF5AQ7RTV0 110 aaKnown RBP10.35□□□□□ -0.75
UBE2D4-202ENST00000415051 LOC107984640A0A0U1RRK4 108 aa10.34□□□□□ -0.75
UBE2D4-202ENST00000415051 LINC00959A0A1B0GUT2 108 aa10.34□□□□□ -0.75
UBE2D4-202ENST00000415051 CCL25O15444 150 aa10.34□□□□□ -0.75
UBE2D4-202ENST00000415051 FGF6P10767 208 aa10.34□□□□□ -0.75
UBE2D4-202ENST00000415051 C9orf116Q5BN46 136 aaPredicted RBP10.34□□□□□ -0.75
UBE2D4-202ENST00000415051 AMMECR1LQ6DCA0 310 aa10.34□□□□□ -0.75
UBE2D4-202ENST00000415051 RNASEKQ6P5S7 137 aaKnown RBP10.34□□□□□ -0.75
UBE2D4-202ENST00000415051 OR5A1Q8NGJ0 315 aa10.34□□□□□ -0.75
UBE2D4-202ENST00000415051 ALG5Q9Y673 324 aa10.34□□□□□ -0.75
UBE2D4-202ENST00000415051 IGLV7-43P04211 117 aa10.33□□□□□ -0.76
UBE2D4-202ENST00000415051 BCL2P10415 239 aa10.33□□□□□ -0.76
UBE2D4-202ENST00000415051 KRTAP11-1Q8IUC1 163 aa10.33□□□□□ -0.76
UBE2D4-202ENST00000415051 GATD1Q8NB37 220 aa10.33□□□□□ -0.76
UBE2D4-202ENST00000415051 DIRC1Q969H9 104 aa10.33□□□□□ -0.76
UBE2D4-202ENST00000415051 NDUFA13Q9P0J0 144 aa10.33□□□□□ -0.76
UBE2D4-202ENST00000415051 H0Y9J4 135 aa10.32□□□□□ -0.76
UBE2D4-202ENST00000415051 CAMPP49913 170 aa10.32□□□□□ -0.76
UBE2D4-202ENST00000415051 IGLV1-50A0A075B6I6 118 aa10.31□□□□□ -0.76
UBE2D4-202ENST00000415051 H7C423 109 aa10.31□□□□□ -0.76
UBE2D4-202ENST00000415051 ZNF561-AS1K7EIQ3 104 aa10.31□□□□□ -0.76
UBE2D4-202ENST00000415051 TMUB2Q71RG4 321 aa10.31□□□□□ -0.76
UBE2D4-202ENST00000415051 NUP35Q8NFH5 326 aa10.31□□□□□ -0.76
UBE2D4-202ENST00000415051 CYTL1Q9NRR1 136 aa10.31□□□□□ -0.76
UBE2D4-202ENST00000415051 IGLV4-69A0A075B6H9 119 aa10.3□□□□□ -0.76
UBE2D4-202ENST00000415051 C19orf71A6NCJ1 209 aa10.3□□□□□ -0.76
UBE2D4-202ENST00000415051 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.3□□□□□ -0.76
UBE2D4-202ENST00000415051 TRGC1P0CF51 173 aa10.3□□□□□ -0.76
UBE2D4-202ENST00000415051 RPL35P42766 123 aaKnown RBP10.3□□□□□ -0.76
UBE2D4-202ENST00000415051 MEF2BQ02080 365 aaPredicted RBP10.3□□□□□ -0.76
UBE2D4-202ENST00000415051 OR2D3Q8NGH3 330 aa10.3□□□□□ -0.76
UBE2D4-202ENST00000415051 RPL39LQ96EH5 51 aaKnown RBP10.3□□□□□ -0.76
UBE2D4-202ENST00000415051 NCR2O95944 276 aa10.29□□□□□ -0.76
UBE2D4-202ENST00000415051 LYZL1Q6UWQ5 148 aa10.29□□□□□ -0.76
UBE2D4-202ENST00000415051 A0A1B0GV50 99 aa10.28□□□□□ -0.76
UBE2D4-202ENST00000415051 F2Z2F3 143 aa10.28□□□□□ -0.76
UBE2D4-202ENST00000415051 APCSP02743 223 aa10.28□□□□□ -0.76
UBE2D4-202ENST00000415051 ZNF25P17030 456 aaPredicted RBP10.28□□□□□ -0.76
UBE2D4-202ENST00000415051 DEFA1P59665 94 aa10.28□□□□□ -0.76
UBE2D4-202ENST00000415051 RPS20P60866 119 aaKnown RBP10.28□□□□□ -0.76
UBE2D4-202ENST00000415051 CD164L2Q6UWJ8 174 aa10.28□□□□□ -0.76
UBE2D4-202ENST00000415051 MBD3L1Q8WWY6 194 aa10.28□□□□□ -0.76
UBE2D4-202ENST00000415051 FXYD6-FXYD2A0A087WZ82 144 aa10.27□□□□□ -0.77
UBE2D4-202ENST00000415051 APOMO95445 188 aa10.27□□□□□ -0.77
UBE2D4-202ENST00000415051 PFDN1O60925 122 aa10.26□□□□□ -0.77
UBE2D4-202ENST00000415051 SFT2D1Q8WV19 159 aa10.26□□□□□ -0.77
UBE2D4-202ENST00000415051 G3V3Q6 166 aa10.25□□□□□ -0.77
UBE2D4-202ENST00000415051 GIPP09681 153 aaPredicted RBP10.25□□□□□ -0.77
UBE2D4-202ENST00000415051 CENPWQ5EE01 88 aa10.25□□□□□ -0.77
UBE2D4-202ENST00000415051 C9orf62Q8N4C0 152 aa10.25□□□□□ -0.77
UBE2D4-202ENST00000415051 ISOC2Q96AB3 205 aa10.25□□□□□ -0.77
UBE2D4-202ENST00000415051 FSIP2Q5CZC0 6907 aa10.25□□□□□ -0.77
UBE2D4-202ENST00000415051 ESDP10768 282 aa10.24□□□□□ -0.77
UBE2D4-202ENST00000415051 CTRLP40313 264 aa10.24□□□□□ -0.77
UBE2D4-202ENST00000415051 RPL18AQ02543 176 aaKnown RBP10.24□□□□□ -0.77
UBE2D4-202ENST00000415051 C11orf52Q96A22 123 aa10.24□□□□□ -0.77
UBE2D4-202ENST00000415051 CDC42SE2Q9NRR3 84 aa10.24□□□□□ -0.77
UBE2D4-202ENST00000415051 A0A087WZ39 114 aa10.23□□□□□ -0.77
UBE2D4-202ENST00000415051 FAM168BA1KXE4 195 aa10.23□□□□□ -0.77
UBE2D4-202ENST00000415051 SDHAF1A6NFY7 115 aa10.23□□□□□ -0.77
UBE2D4-202ENST00000415051 SS18Q15532 418 aa10.23□□□□□ -0.77
UBE2D4-202ENST00000415051 CAMK2N2Q96S95 79 aa10.23□□□□□ -0.77
UBE2D4-202ENST00000415051 OPRPNQ99935 248 aaPredicted RBP10.23□□□□□ -0.77
UBE2D4-202ENST00000415051 CNFNQ9BYD5 112 aa10.23□□□□□ -0.77
UBE2D4-202ENST00000415051 BCL2L11O43521 198 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms