RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 H7C1H1 209 aa15.44■□□□□ 0.06
AC005540.1-201ENST00000413911 SPACA4Q8TDM5 124 aa15.44■□□□□ 0.06
AC005540.1-201ENST00000413911 RASL11AQ6T310 242 aa15.43■□□□□ 0.06
AC005540.1-201ENST00000413911 TRBV20OR9-2A0A075B6H5 130 aa15.42■□□□□ 0.06
AC005540.1-201ENST00000413911 CACNG7P62955 275 aa15.42■□□□□ 0.06
AC005540.1-201ENST00000413911 BCL2P10415 239 aa15.41■□□□□ 0.06
AC005540.1-201ENST00000413911 GNG4P50150 75 aa15.41■□□□□ 0.06
AC005540.1-201ENST00000413911 RPS20P60866 119 aaKnown RBP15.41■□□□□ 0.06
AC005540.1-201ENST00000413911 MEF2BQ02080 365 aaPredicted RBP15.41■□□□□ 0.06
AC005540.1-201ENST00000413911 ALKAL2Q6UX46 152 aa15.41■□□□□ 0.06
AC005540.1-201ENST00000413911 C15orf56Q8N910 161 aa15.41■□□□□ 0.06
AC005540.1-201ENST00000413911 DPH3Q96FX2 82 aa15.41■□□□□ 0.06
AC005540.1-201ENST00000413911 PGLYRP4Q96LB8 373 aa15.41■□□□□ 0.06
AC005540.1-201ENST00000413911 AP5S1Q9NUS5 200 aa15.41■□□□□ 0.06
AC005540.1-201ENST00000413911 LYZL1Q6UWQ5 148 aa15.4■□□□□ 0.06
AC005540.1-201ENST00000413911 LYPD6BQ8NI32 183 aa15.4■□□□□ 0.06
AC005540.1-201ENST00000413911 RNF185Q96GF1 192 aa15.4■□□□□ 0.06
AC005540.1-201ENST00000413911 NIT2Q9NQR4 276 aa15.4■□□□□ 0.06
AC005540.1-201ENST00000413911 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.39■□□□□ 0.05
AC005540.1-201ENST00000413911 PLAC8Q9NZF1 115 aa15.39■□□□□ 0.05
AC005540.1-201ENST00000413911 PDE6DO43924 150 aa15.38■□□□□ 0.05
AC005540.1-201ENST00000413911 IFNA1P01562 189 aa15.38■□□□□ 0.05
AC005540.1-201ENST00000413911 NTF3P20783 257 aa15.38■□□□□ 0.05
AC005540.1-201ENST00000413911 GAGE12HA6NDE8 117 aa15.37■□□□□ 0.05
AC005540.1-201ENST00000413911 PHOX2AO14813 284 aa15.37■□□□□ 0.05
AC005540.1-201ENST00000413911 TAGLN2P37802 199 aaKnown RBP15.37■□□□□ 0.05
AC005540.1-201ENST00000413911 SMIM12Q96EX1 92 aa15.37■□□□□ 0.05
AC005540.1-201ENST00000413911 DPH3P1Q9H4G8 78 aa15.37■□□□□ 0.05
AC005540.1-201ENST00000413911 MED9Q9NWA0 146 aa15.37■□□□□ 0.05
AC005540.1-201ENST00000413911 F2Z2F3 143 aa15.36■□□□□ 0.05
AC005540.1-201ENST00000413911 AMTP48728 403 aa15.36■□□□□ 0.05
AC005540.1-201ENST00000413911 BLOC1S1P78537 153 aa15.36■□□□□ 0.05
AC005540.1-201ENST00000413911 TRGC1P0CF51 173 aa15.35■□□□□ 0.05
AC005540.1-201ENST00000413911 COX6A2Q02221 97 aa15.35■□□□□ 0.05
AC005540.1-201ENST00000413911 UBE2L6O14933 153 aa15.34■□□□□ 0.05
AC005540.1-201ENST00000413911 COTL1Q14019 142 aa15.34■□□□□ 0.05
AC005540.1-201ENST00000413911 PRSS3P2Q8NHM4 247 aa15.34■□□□□ 0.05
AC005540.1-201ENST00000413911 RNF213Q63HN8 5207 aa15.33■□□□□ 0.05
AC005540.1-201ENST00000413911 IGKV3OR2-268A0A0C4DH90 116 aa15.33■□□□□ 0.04
AC005540.1-201ENST00000413911 XKRY2A2RUG3 117 aa15.33■□□□□ 0.04
AC005540.1-201ENST00000413911 HIGD2BQ4VC39 106 aa15.33■□□□□ 0.04
AC005540.1-201ENST00000413911 WDR73Q6P4I2 378 aa15.33■□□□□ 0.04
AC005540.1-201ENST00000413911 GATD1Q8NB37 220 aa15.33■□□□□ 0.04
AC005540.1-201ENST00000413911 NUDT10Q8NFP7 164 aa15.33■□□□□ 0.04
AC005540.1-201ENST00000413911 NUDT11Q96G61 164 aa15.33■□□□□ 0.04
AC005540.1-201ENST00000413911 TRAV26-2A0A0B4J265 109 aa15.32■□□□□ 0.04
AC005540.1-201ENST00000413911 CTRLP40313 264 aa15.32■□□□□ 0.04
AC005540.1-201ENST00000413911 ODF1Q14990 250 aa15.32■□□□□ 0.04
AC005540.1-201ENST00000413911 RPS10P46783 165 aaKnown RBP15.31■□□□□ 0.04
AC005540.1-201ENST00000413911 CNFNQ9BYD5 112 aa15.3■□□□□ 0.04
AC005540.1-201ENST00000413911 IGKV2-24A0A0C4DH68 120 aa15.29■□□□□ 0.04
AC005540.1-201ENST00000413911 K7EN84 100 aa15.29■□□□□ 0.04
AC005540.1-201ENST00000413911 MAJINQ3KP22 176 aa15.29■□□□□ 0.04
AC005540.1-201ENST00000413911 CHCHD10Q8WYQ3 142 aaPredicted RBP15.29■□□□□ 0.04
AC005540.1-201ENST00000413911 RPL39LQ96EH5 51 aaKnown RBP15.29■□□□□ 0.04
AC005540.1-201ENST00000413911 RNASE7Q9H1E1 156 aaKnown RBP15.29■□□□□ 0.04
AC005540.1-201ENST00000413911 BIN3Q9NQY0 253 aa15.29■□□□□ 0.04
AC005540.1-201ENST00000413911 NDUFS6O75380 124 aaKnown RBP15.28■□□□□ 0.04
AC005540.1-201ENST00000413911 TWIST1Q15672 202 aa15.28■□□□□ 0.04
AC005540.1-201ENST00000413911 CFAP161Q6P656 301 aa15.28■□□□□ 0.04
AC005540.1-201ENST00000413911 C7orf33Q8WU49 177 aa15.28■□□□□ 0.04
AC005540.1-201ENST00000413911 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.27■□□□□ 0.04
AC005540.1-201ENST00000413911 IGKV2-29A2NJV5 120 aaPredicted RBP15.27■□□□□ 0.04
AC005540.1-201ENST00000413911 FOXA3P55318 350 aaPredicted RBP15.27■□□□□ 0.04
AC005540.1-201ENST00000413911 GTSF1Q8WW33 167 aa15.27■□□□□ 0.04
AC005540.1-201ENST00000413911 RPP21Q9H633 154 aaKnown RBP15.27■□□□□ 0.04
AC005540.1-201ENST00000413911 TMEM250H0YL14 139 aa15.26■□□□□ 0.03
AC005540.1-201ENST00000413911 PRR3P79522 188 aaKnown RBP15.26■□□□□ 0.03
AC005540.1-201ENST00000413911 OCC1Q8TAD7 63 aa15.26■□□□□ 0.03
AC005540.1-201ENST00000413911 LINC01600Q96MT4 127 aa15.26■□□□□ 0.03
AC005540.1-201ENST00000413911 GVQW2A0A096LPI5 108 aaPredicted RBP15.25■□□□□ 0.03
AC005540.1-201ENST00000413911 STPG4Q8N801 248 aa15.25■□□□□ 0.03
AC005540.1-201ENST00000413911 A0A096LNI7 61 aa15.24■□□□□ 0.03
AC005540.1-201ENST00000413911 FOXI1Q12951 378 aa15.24■□□□□ 0.03
AC005540.1-201ENST00000413911 AMMECR1LQ6DCA0 310 aa15.23■□□□□ 0.03
AC005540.1-201ENST00000413911 RNASEKQ6P5S7 137 aaKnown RBP15.23■□□□□ 0.03
AC005540.1-201ENST00000413911 FGF6P10767 208 aa15.22■□□□□ 0.03
AC005540.1-201ENST00000413911 FAM210AQ96ND0 272 aa15.22■□□□□ 0.03
AC005540.1-201ENST00000413911 NCR2O95944 276 aa15.21■□□□□ 0.03
AC005540.1-201ENST00000413911 LINC00526Q96FQ7 95 aa15.21■□□□□ 0.03
AC005540.1-201ENST00000413911 FAM231BA6NCW3 169 aa15.2■□□□□ 0.02
AC005540.1-201ENST00000413911 TEX261Q6UWH6 196 aa15.2■□□□□ 0.02
AC005540.1-201ENST00000413911 SDHAF1A6NFY7 115 aa15.19■□□□□ 0.02
AC005540.1-201ENST00000413911 H7C423 109 aa15.19■□□□□ 0.02
AC005540.1-201ENST00000413911 APCSP02743 223 aa15.19■□□□□ 0.02
AC005540.1-201ENST00000413911 GAS8-AS1O95177 125 aa15.18■□□□□ 0.02
AC005540.1-201ENST00000413911 XCL1P47992 114 aa15.17■□□□□ 0.02
AC005540.1-201ENST00000413911 OR5A1Q8NGJ0 315 aa15.17■□□□□ 0.02
AC005540.1-201ENST00000413911 EIF5A2Q9GZV4 153 aaKnown RBP15.16■□□□□ 0.02
AC005540.1-201ENST00000413911 A0A0J9YXV3 536 aa15.15■□□□□ 0.02
AC005540.1-201ENST00000413911 LINC00959A0A1B0GUT2 108 aa15.15■□□□□ 0.02
AC005540.1-201ENST00000413911 GATCO43716 136 aaKnown RBP15.15■□□□□ 0.02
AC005540.1-201ENST00000413911 SRP19P09132 144 aaKnown RBP15.15■□□□□ 0.02
AC005540.1-201ENST00000413911 KRTAP10-8P60410 259 aa15.15■□□□□ 0.02
AC005540.1-201ENST00000413911 CCL25O15444 150 aa15.14■□□□□ 0.01
AC005540.1-201ENST00000413911 ESDP10768 282 aa15.14■□□□□ 0.01
AC005540.1-201ENST00000413911 I3L3M4 83 aa15.13■□□□□ 0.01
AC005540.1-201ENST00000413911 TSHBP01222 138 aa15.13■□□□□ 0.01
AC005540.1-201ENST00000413911 ZNF25P17030 456 aaPredicted RBP15.13■□□□□ 0.01
AC005540.1-201ENST00000413911 FAM231DQ6ZW35 169 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms