RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 LINC00482Q8N8I6 264 aa8.6□□□□□ -1.03
PRPF40A-202ENST00000410080 TRAV23DV6A0A075B6W5 121 aa8.6□□□□□ -1.03
PRPF40A-202ENST00000410080 LENEPQ9Y5L5 61 aa8.6□□□□□ -1.03
PRPF40A-202ENST00000410080 COL4A3Q01955 1670 aa8.6□□□□□ -1.03
PRPF40A-202ENST00000410080 GPR179Q6PRD1 2367 aa8.59□□□□□ -1.03
PRPF40A-202ENST00000410080 BPY2O14599 106 aa8.59□□□□□ -1.03
PRPF40A-202ENST00000410080 LY6G6DO95868 133 aa8.59□□□□□ -1.03
PRPF40A-202ENST00000410080 SERP1Q9Y6X1 66 aa8.59□□□□□ -1.03
PRPF40A-202ENST00000410080 IGLV11-55A0A075B6I3 123 aa8.59□□□□□ -1.03
PRPF40A-202ENST00000410080 SCXQ7RTU7 201 aa8.59□□□□□ -1.03
PRPF40A-202ENST00000410080 NCOR1P1Q9H4R4 102 aa8.59□□□□□ -1.03
PRPF40A-202ENST00000410080 C11orf53Q8IXP5 236 aa8.58□□□□□ -1.04
PRPF40A-202ENST00000410080 TRBV6-1A0A0K0K1D8 114 aa8.58□□□□□ -1.04
PRPF40A-202ENST00000410080 IGF1P05019 195 aa8.58□□□□□ -1.04
PRPF40A-202ENST00000410080 IGKV2-28A0A075B6P5 120 aa8.58□□□□□ -1.04
PRPF40A-202ENST00000410080 IGKV2D-28P01615 120 aa8.58□□□□□ -1.04
PRPF40A-202ENST00000410080 NFE4Q86UQ8 179 aa8.58□□□□□ -1.04
PRPF40A-202ENST00000410080 DCANP1Q8TF63 244 aa8.58□□□□□ -1.04
PRPF40A-202ENST00000410080 SHISA2Q6UWI4 295 aa8.58□□□□□ -1.04
PRPF40A-202ENST00000410080 CEMP1Q6PRD7 247 aaPredicted RBP8.57□□□□□ -1.04
PRPF40A-202ENST00000410080 K7EIM0 57 aa8.57□□□□□ -1.04
PRPF40A-202ENST00000410080 LYPD6Q86Y78 171 aa8.57□□□□□ -1.04
PRPF40A-202ENST00000410080 SPANXCQ9NY87 97 aa8.57□□□□□ -1.04
PRPF40A-202ENST00000410080 I3L2K1 104 aa8.57□□□□□ -1.04
PRPF40A-202ENST00000410080 LINC01545Q5VT33 79 aa8.57□□□□□ -1.04
PRPF40A-202ENST00000410080 Q6ZUT4 128 aa8.57□□□□□ -1.04
PRPF40A-202ENST00000410080 BDP1A6H8Y1 2624 aa8.57□□□□□ -1.04
PRPF40A-202ENST00000410080 JMJD7-PLA2G4BH0Y9G9 81 aa8.57□□□□□ -1.04
PRPF40A-202ENST00000410080 ATOX1O00244 68 aa8.57□□□□□ -1.04
PRPF40A-202ENST00000410080 UNQ9165/PRO28630Q6UXU0 137 aa8.57□□□□□ -1.04
PRPF40A-202ENST00000410080 ZNF843Q8N446 348 aa8.57□□□□□ -1.04
PRPF40A-202ENST00000410080 CRYGBP07316 175 aa8.57□□□□□ -1.04
PRPF40A-202ENST00000410080 C1orf147Q96MC9 270 aaPredicted RBP8.57□□□□□ -1.04
PRPF40A-202ENST00000410080 MED14OSP0DP75 135 aa8.56□□□□□ -1.04
PRPF40A-202ENST00000410080 MSRB1Q9NZV6 116 aa8.56□□□□□ -1.04
PRPF40A-202ENST00000410080 TP53TG3Q9ULZ0 132 aa8.56□□□□□ -1.04
PRPF40A-202ENST00000410080 PRAC2D3DTV9 90 aa8.56□□□□□ -1.04
PRPF40A-202ENST00000410080 IGF2-ASQ6U949 168 aa8.56□□□□□ -1.04
PRPF40A-202ENST00000410080 SIVA1O15304 175 aa8.56□□□□□ -1.04
PRPF40A-202ENST00000410080 CIRBP-AS1Q8TBR5 109 aa8.56□□□□□ -1.04
PRPF40A-202ENST00000410080 C3orf84H3BNL1 204 aa8.55□□□□□ -1.04
PRPF40A-202ENST00000410080 CHCHD10Q8WYQ3 142 aaPredicted RBP8.55□□□□□ -1.04
PRPF40A-202ENST00000410080 PRORYQ9H606 182 aa8.55□□□□□ -1.04
PRPF40A-202ENST00000410080 FSHBP01225 129 aa8.55□□□□□ -1.04
PRPF40A-202ENST00000410080 ZFAND2AQ8N6M9 145 aa8.55□□□□□ -1.04
PRPF40A-202ENST00000410080 TOMM6Q96B49 74 aa8.55□□□□□ -1.04
PRPF40A-202ENST00000410080 PRYO14603 147 aa8.55□□□□□ -1.04
PRPF40A-202ENST00000410080 NUPR2A6NF83 97 aa8.55□□□□□ -1.04
PRPF40A-202ENST00000410080 Q6ZVH6 145 aa8.54□□□□□ -1.04
PRPF40A-202ENST00000410080 C1orf158Q8N1D5 194 aa8.54□□□□□ -1.04
PRPF40A-202ENST00000410080 RPL37AP8A6NKH3 93 aa8.54□□□□□ -1.04
PRPF40A-202ENST00000410080 DOPEY1Q5JWR5 2465 aa8.54□□□□□ -1.04
PRPF40A-202ENST00000410080 Q6ZTI0 123 aa8.54□□□□□ -1.04
PRPF40A-202ENST00000410080 ZNF706Q9Y5V0 76 aaPredicted RBP8.54□□□□□ -1.04
PRPF40A-202ENST00000410080 IGHV1-58A0A0C4DH39 117 aa8.53□□□□□ -1.04
PRPF40A-202ENST00000410080 UFSP1Q6NVU6 142 aa8.53□□□□□ -1.04
PRPF40A-202ENST00000410080 Q6ZVQ6 151 aa8.53□□□□□ -1.04
PRPF40A-202ENST00000410080 COL27A1Q8IZC6 1860 aaPredicted RBP8.53□□□□□ -1.04
PRPF40A-202ENST00000410080 TRBV10-1A0A0K0K1A3 114 aa8.53□□□□□ -1.04
PRPF40A-202ENST00000410080 LYRM9A8MSI8 78 aa8.53□□□□□ -1.04
PRPF40A-202ENST00000410080 RETNLBQ9BQ08 111 aa8.53□□□□□ -1.04
PRPF40A-202ENST00000410080 DAZAP2Q15038 168 aaPredicted RBP8.53□□□□□ -1.04
PRPF40A-202ENST00000410080 MRPL55Q7Z7F7 128 aaKnown RBP8.53□□□□□ -1.04
PRPF40A-202ENST00000410080 A0A1W2PNU3 283 aaPredicted RBP8.52□□□□□ -1.04
PRPF40A-202ENST00000410080 TRAV10A0A0B4J240 114 aa8.52□□□□□ -1.05
PRPF40A-202ENST00000410080 ZNF747Q9BV97 191 aa8.52□□□□□ -1.05
PRPF40A-202ENST00000410080 XAGE1AQ9HD64 81 aa8.52□□□□□ -1.05
PRPF40A-202ENST00000410080 IGFL2Q6UWQ7 119 aa8.52□□□□□ -1.05
PRPF40A-202ENST00000410080 K7EMT4 169 aa8.51□□□□□ -1.05
PRPF40A-202ENST00000410080 WISP2O76076 250 aa8.51□□□□□ -1.05
PRPF40A-202ENST00000410080 IGLV2-8P01709 118 aa8.51□□□□□ -1.05
PRPF40A-202ENST00000410080 NANOS2P60321 138 aaKnown RBP8.51□□□□□ -1.05
PRPF40A-202ENST00000410080 SLPIP03973 132 aa8.51□□□□□ -1.05
PRPF40A-202ENST00000410080 TAX1BP3O14907 124 aa8.51□□□□□ -1.05
PRPF40A-202ENST00000410080 IGLV3-1P01715 115 aa8.5□□□□□ -1.05
PRPF40A-202ENST00000410080 CUL9Q8IWT3 2517 aa8.5□□□□□ -1.05
PRPF40A-202ENST00000410080 PIK3CD-AS1Q5SR53 167 aa8.5□□□□□ -1.05
PRPF40A-202ENST00000410080 LY6LH3BQJ8 138 aa8.5□□□□□ -1.05
PRPF40A-202ENST00000410080 Q8N7P7 452 aa8.5□□□□□ -1.05
PRPF40A-202ENST00000410080 LINC00467Q9BRT7 94 aa8.5□□□□□ -1.05
PRPF40A-202ENST00000410080 C20orf144Q9BQM9 153 aa8.5□□□□□ -1.05
PRPF40A-202ENST00000410080 LOXL1Q08397 574 aaPredicted RBP8.49□□□□□ -1.05
PRPF40A-202ENST00000410080 PLAC8L1A1L4L8 177 aa8.49□□□□□ -1.05
PRPF40A-202ENST00000410080 Q6YL49 198 aa8.49□□□□□ -1.05
PRPF40A-202ENST00000410080 C19orf84I3L1E1 186 aa8.49□□□□□ -1.05
PRPF40A-202ENST00000410080 IGLV2-11P01706 119 aa8.49□□□□□ -1.05
PRPF40A-202ENST00000410080 LINC01548A6NM66 108 aa8.49□□□□□ -1.05
PRPF40A-202ENST00000410080 KPRPQ5T749 579 aaPredicted RBP8.49□□□□□ -1.05
PRPF40A-202ENST00000410080 SPATA12Q7Z6I5 190 aa8.48□□□□□ -1.05
PRPF40A-202ENST00000410080 A0A0J9YX75 114 aa8.48□□□□□ -1.05
PRPF40A-202ENST00000410080 SDIM1Q6ZPB5 146 aa8.48□□□□□ -1.05
PRPF40A-202ENST00000410080 SMIM9A6NGZ8 99 aa8.48□□□□□ -1.05
PRPF40A-202ENST00000410080 LINC00526Q96FQ7 95 aa8.48□□□□□ -1.05
PRPF40A-202ENST00000410080 CLUHP3Q96NS8 147 aa8.48□□□□□ -1.05
PRPF40A-202ENST00000410080 IGLV5-52A0A0A0MRZ9 124 aa8.48□□□□□ -1.05
PRPF40A-202ENST00000410080 LINC00173Q6ZV60 143 aa8.48□□□□□ -1.05
PRPF40A-202ENST00000410080 MIFP14174 115 aa8.48□□□□□ -1.05
PRPF40A-202ENST00000410080 PDE6GP18545 87 aa8.48□□□□□ -1.05
PRPF40A-202ENST00000410080 A6NDX4 124 aa8.47□□□□□ -1.05
PRPF40A-202ENST00000410080 LINC00322Q6ZN03 302 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms