RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 TMEM243Q9BU79 118 aa14.1□□□□□ -0.15
C4orf48-202ENST00000409860 VPS13DQ5THJ4 4388 aa14.1□□□□□ -0.15
C4orf48-202ENST00000409860 TCAPO15273 167 aa14.09□□□□□ -0.15
C4orf48-202ENST00000409860 TSHBP01222 138 aa14.09□□□□□ -0.15
C4orf48-202ENST00000409860 RAB5AP20339 215 aa14.09□□□□□ -0.15
C4orf48-202ENST00000409860 PKIAP61925 76 aa14.09□□□□□ -0.15
C4orf48-202ENST00000409860 LOC389332A0A1B0GUA5 103 aa14.08□□□□□ -0.16
C4orf48-202ENST00000409860 PRSS47A8MTI9 375 aa14.08□□□□□ -0.16
C4orf48-202ENST00000409860 IGLV2-18A0A075B6J9 118 aa14.07□□□□□ -0.16
C4orf48-202ENST00000409860 DNAH10OSP0CZ25 163 aa14.07□□□□□ -0.16
C4orf48-202ENST00000409860 TMEM262E9PQX1 116 aa14.06□□□□□ -0.16
C4orf48-202ENST00000409860 UBE2L6O14933 153 aa14.06□□□□□ -0.16
C4orf48-202ENST00000409860 LINC01556Q5JQF7 62 aa14.06□□□□□ -0.16
C4orf48-202ENST00000409860 NIT1Q86X76 327 aa14.06□□□□□ -0.16
C4orf48-202ENST00000409860 NXT2Q9NPJ8 142 aaKnown RBP14.06□□□□□ -0.16
C4orf48-202ENST00000409860 GAGE6Q13070 117 aa14.05□□□□□ -0.16
C4orf48-202ENST00000409860 TTC32Q5I0X7 151 aa14.05□□□□□ -0.16
C4orf48-202ENST00000409860 Q8N8P6 123 aa14.05□□□□□ -0.16
C4orf48-202ENST00000409860 CHCHD7Q9BUK0 85 aa14.05□□□□□ -0.16
C4orf48-202ENST00000409860 TRAV9-2A0A087WT02 112 aa14.04□□□□□ -0.16
C4orf48-202ENST00000409860 A0A087WX48 190 aa14.04□□□□□ -0.16
C4orf48-202ENST00000409860 TRGC2P03986 189 aa14.04□□□□□ -0.16
C4orf48-202ENST00000409860 LYSTQ99698 3801 aa14.03□□□□□ -0.16
C4orf48-202ENST00000409860 NBDYA0A0U1RRE5 68 aa14.03□□□□□ -0.16
C4orf48-202ENST00000409860 K7EP13 123 aa14.03□□□□□ -0.16
C4orf48-202ENST00000409860 IGHV3-30P01768 117 aa14.03□□□□□ -0.16
C4orf48-202ENST00000409860 IGHV3-33P01772 117 aa14.03□□□□□ -0.16
C4orf48-202ENST00000409860 IGHV3-30-3P0DP02 117 aa14.03□□□□□ -0.16
C4orf48-202ENST00000409860 IGHV3-30-5P0DP03 117 aa14.03□□□□□ -0.16
C4orf48-202ENST00000409860 PRSS3P2Q8NHM4 247 aa14.03□□□□□ -0.16
C4orf48-202ENST00000409860 SACSQ9NZJ4 4579 aa14.02□□□□□ -0.16
C4orf48-202ENST00000409860 H7C423 109 aa14.02□□□□□ -0.17
C4orf48-202ENST00000409860 ESDP10768 282 aa14.02□□□□□ -0.17
C4orf48-202ENST00000409860 IFI27P40305 119 aaPredicted RBP14.02□□□□□ -0.17
C4orf48-202ENST00000409860 C10orf126Q8N4M7 172 aa14.02□□□□□ -0.17
C4orf48-202ENST00000409860 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.01□□□□□ -0.17
C4orf48-202ENST00000409860 IGKV2-29A2NJV5 120 aaPredicted RBP14.01□□□□□ -0.17
C4orf48-202ENST00000409860 K7EMI3 77 aa14.01□□□□□ -0.17
C4orf48-202ENST00000409860 M0R2N4 97 aa14□□□□□ -0.17
C4orf48-202ENST00000409860 MPV17L2Q567V2 206 aa14□□□□□ -0.17
C4orf48-202ENST00000409860 Q8N3U1 123 aa14□□□□□ -0.17
C4orf48-202ENST00000409860 C18orf32Q8TCD1 76 aa14□□□□□ -0.17
C4orf48-202ENST00000409860 TMEM18Q96B42 140 aa14□□□□□ -0.17
C4orf48-202ENST00000409860 ORMDL2Q53FV1 153 aa13.99□□□□□ -0.17
C4orf48-202ENST00000409860 AMMECR1LQ6DCA0 310 aa13.99□□□□□ -0.17
C4orf48-202ENST00000409860 FA2HQ7L5A8 372 aa13.99□□□□□ -0.17
C4orf48-202ENST00000409860 RBX1P62877 108 aa13.98□□□□□ -0.17
C4orf48-202ENST00000409860 SMAGPQ0VAQ4 97 aa13.98□□□□□ -0.17
C4orf48-202ENST00000409860 LAGE3Q14657 143 aa13.98□□□□□ -0.17
C4orf48-202ENST00000409860 KMT2CQ8NEZ4 4911 aaKnown RBP13.97□□□□□ -0.17
C4orf48-202ENST00000409860 FGF6P10767 208 aa13.97□□□□□ -0.17
C4orf48-202ENST00000409860 RNASEKQ6P5S7 137 aaKnown RBP13.97□□□□□ -0.17
C4orf48-202ENST00000409860 Q6ZR54 194 aa13.97□□□□□ -0.17
C4orf48-202ENST00000409860 C20orf203Q8NBC4 194 aa13.97□□□□□ -0.17
C4orf48-202ENST00000409860 DNAH6Q9C0G6 4158 aa13.97□□□□□ -0.17
C4orf48-202ENST00000409860 A0A1B0GUV1 79 aa13.96□□□□□ -0.17
C4orf48-202ENST00000409860 ZNF25P17030 456 aaPredicted RBP13.96□□□□□ -0.17
C4orf48-202ENST00000409860 Q8N976 141 aa13.96□□□□□ -0.17
C4orf48-202ENST00000409860 KRTAP1-5Q9BYS1 174 aa13.96□□□□□ -0.17
C4orf48-202ENST00000409860 ANGP03950 147 aaKnown RBP13.95□□□□□ -0.18
C4orf48-202ENST00000409860 RAB5BP61020 215 aa13.95□□□□□ -0.18
C4orf48-202ENST00000409860 TMEM101Q96IK0 257 aa13.95□□□□□ -0.18
C4orf48-202ENST00000409860 KLK12Q9UKR0 248 aa13.95□□□□□ -0.18
C4orf48-202ENST00000409860 IBA57-AS1B1ANH7 110 aa13.94□□□□□ -0.18
C4orf48-202ENST00000409860 G0S2P27469 103 aa13.94□□□□□ -0.18
C4orf48-202ENST00000409860 MRPL52Q86TS9 123 aaKnown RBP13.94□□□□□ -0.18
C4orf48-202ENST00000409860 LINC01546A6NGU7 62 aa13.93□□□□□ -0.18
C4orf48-202ENST00000409860 BTF3P20290 206 aaKnown RBP13.93□□□□□ -0.18
C4orf48-202ENST00000409860 OR5A1Q8NGJ0 315 aa13.93□□□□□ -0.18
C4orf48-202ENST00000409860 AP5S1Q9NUS5 200 aa13.93□□□□□ -0.18
C4orf48-202ENST00000409860 IGLV4-60A0A075B6I1 120 aa13.92□□□□□ -0.18
C4orf48-202ENST00000409860 CRPP02741 224 aa13.92□□□□□ -0.18
C4orf48-202ENST00000409860 LINC00614P0C842 121 aa13.92□□□□□ -0.18
C4orf48-202ENST00000409860 RPL39P62891 51 aaKnown RBP13.92□□□□□ -0.18
C4orf48-202ENST00000409860 DGAT2L7PQ6IED9 249 aa13.92□□□□□ -0.18
C4orf48-202ENST00000409860 CYSLTR1Q9Y271 337 aa13.92□□□□□ -0.18
C4orf48-202ENST00000409860 UBE2D4Q9Y2X8 147 aa13.92□□□□□ -0.18
C4orf48-202ENST00000409860 RYR2Q92736 4967 aa13.92□□□□□ -0.18
C4orf48-202ENST00000409860 Q0VG73 95 aa13.91□□□□□ -0.18
C4orf48-202ENST00000409860 C2orf66Q6UXQ4 117 aa13.91□□□□□ -0.18
C4orf48-202ENST00000409860 BAGE3Q86Y29 109 aa13.91□□□□□ -0.18
C4orf48-202ENST00000409860 TIMM21Q9BVV7 248 aa13.91□□□□□ -0.18
C4orf48-202ENST00000409860 SPANXA1Q9NS26 97 aa13.91□□□□□ -0.18
C4orf48-202ENST00000409860 TRAV8-3A0A0A6YYJ7 113 aa13.9□□□□□ -0.18
C4orf48-202ENST00000409860 C1orf134Q5TEV5 83 aa13.9□□□□□ -0.18
C4orf48-202ENST00000409860 C6orf223Q8N319 242 aa13.9□□□□□ -0.18
C4orf48-202ENST00000409860 UBE2WQ96B02 151 aa13.9□□□□□ -0.18
C4orf48-202ENST00000409860 CSDC2Q9Y534 153 aaKnown RBP13.9□□□□□ -0.18
C4orf48-202ENST00000409860 KMT2AQ03164 3969 aa13.9□□□□□ -0.18
C4orf48-202ENST00000409860 NFE4Q86UQ8 179 aa13.89□□□□□ -0.19
C4orf48-202ENST00000409860 LINC00269Q8N2A0 174 aa13.89□□□□□ -0.19
C4orf48-202ENST00000409860 URB1-AS1Q96HZ7 61 aa13.89□□□□□ -0.19
C4orf48-202ENST00000409860 Q9HAA7 133 aa13.89□□□□□ -0.19
C4orf48-202ENST00000409860 HYDINQ4G0P3 5121 aa13.88□□□□□ -0.19
C4orf48-202ENST00000409860 CHCHD1Q96BP2 118 aaKnown RBP13.88□□□□□ -0.19
C4orf48-202ENST00000409860 LINC01549A6NIU2 74 aa13.87□□□□□ -0.19
C4orf48-202ENST00000409860 C1orf196B1AJZ1 125 aa13.87□□□□□ -0.19
C4orf48-202ENST00000409860 REG3AQ06141 175 aa13.87□□□□□ -0.19
C4orf48-202ENST00000409860 CLPSL2Q6UWE3 100 aa13.87□□□□□ -0.19
C4orf48-202ENST00000409860 PRR34Q9NV39 138 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms