RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 KLK12Q9UKR0 248 aa14.96□□□□□ -0.01
PTCD3-203ENST00000409783 DYNC1H1Q14204 4646 aaKnown RBP14.96□□□□□ -0.02
PTCD3-203ENST00000409783 PKHD1P08F94 4074 aa14.95□□□□□ -0.02
PTCD3-203ENST00000409783 PKIAP61925 76 aa14.95□□□□□ -0.02
PTCD3-203ENST00000409783 Q8N976 141 aa14.95□□□□□ -0.02
PTCD3-203ENST00000409783 C7orf77A4D0Y5 90 aa14.94□□□□□ -0.02
PTCD3-203ENST00000409783 I3L3M4 83 aa14.94□□□□□ -0.02
PTCD3-203ENST00000409783 RBX1P62877 108 aa14.94□□□□□ -0.02
PTCD3-203ENST00000409783 CLRN3Q8NCR9 226 aa14.94□□□□□ -0.02
PTCD3-203ENST00000409783 BTF3L4Q96K17 158 aa14.94□□□□□ -0.02
PTCD3-203ENST00000409783 TRAV8-3A0A0A6YYJ7 113 aa14.93□□□□□ -0.02
PTCD3-203ENST00000409783 TRBV27A0A0K0K1C4 114 aa14.93□□□□□ -0.02
PTCD3-203ENST00000409783 AMTP48728 403 aa14.93□□□□□ -0.02
PTCD3-203ENST00000409783 ELOBQ15370 118 aa14.93□□□□□ -0.02
PTCD3-203ENST00000409783 TMEM242Q9NWH2 141 aa14.93□□□□□ -0.02
PTCD3-203ENST00000409783 TRBV24-1A0A075B6N3 115 aa14.92□□□□□ -0.02
PTCD3-203ENST00000409783 PPP1R17O96001 155 aa14.92□□□□□ -0.02
PTCD3-203ENST00000409783 TSHBP01222 138 aa14.92□□□□□ -0.02
PTCD3-203ENST00000409783 CKS2P33552 79 aa14.92□□□□□ -0.02
PTCD3-203ENST00000409783 D6R8Y8 96 aa14.91□□□□□ -0.02
PTCD3-203ENST00000409783 PMCHP20382 165 aa14.91□□□□□ -0.02
PTCD3-203ENST00000409783 SUMO2P61956 95 aaKnown RBP14.91□□□□□ -0.02
PTCD3-203ENST00000409783 ENHOQ6UWT2 76 aa14.91□□□□□ -0.02
PTCD3-203ENST00000409783 UBE2WQ96B02 151 aa14.91□□□□□ -0.02
PTCD3-203ENST00000409783 A0A1B0GUV1 79 aa14.9□□□□□ -0.02
PTCD3-203ENST00000409783 RHEBQ15382 184 aa14.9□□□□□ -0.02
PTCD3-203ENST00000409783 TRAV9-1A0A075B6T8 112 aa14.89□□□□□ -0.03
PTCD3-203ENST00000409783 A0A087WTM6 91 aa14.89□□□□□ -0.03
PTCD3-203ENST00000409783 TNFRSF6BO95407 300 aa14.89□□□□□ -0.03
PTCD3-203ENST00000409783 APCSP02743 223 aa14.89□□□□□ -0.03
PTCD3-203ENST00000409783 ANGP03950 147 aaKnown RBP14.89□□□□□ -0.03
PTCD3-203ENST00000409783 ESDP10768 282 aa14.89□□□□□ -0.03
PTCD3-203ENST00000409783 C20orf203Q8NBC4 194 aa14.89□□□□□ -0.03
PTCD3-203ENST00000409783 C20orf78Q9BR46 151 aa14.89□□□□□ -0.03
PTCD3-203ENST00000409783 PRR34Q9NV39 138 aa14.89□□□□□ -0.03
PTCD3-203ENST00000409783 IGLV4-60A0A075B6I1 120 aa14.88□□□□□ -0.03
PTCD3-203ENST00000409783 LRCOL1A6NCL2 159 aa14.88□□□□□ -0.03
PTCD3-203ENST00000409783 VCYO14598 125 aa14.88□□□□□ -0.03
PTCD3-203ENST00000409783 NPYP01303 97 aa14.88□□□□□ -0.03
PTCD3-203ENST00000409783 APOC3P02656 99 aa14.88□□□□□ -0.03
PTCD3-203ENST00000409783 PPBPP02775 128 aa14.88□□□□□ -0.03
PTCD3-203ENST00000409783 RPL32P62910 135 aaKnown RBP14.88□□□□□ -0.03
PTCD3-203ENST00000409783 MAPKAPK5-AS1Q8N8E1 139 aa14.87□□□□□ -0.03
PTCD3-203ENST00000409783 TM2D2Q9BX73 214 aa14.87□□□□□ -0.03
PTCD3-203ENST00000409783 RPS10P5Q9NQ39 176 aa14.87□□□□□ -0.03
PTCD3-203ENST00000409783 DNAH5Q8TE73 4624 aa14.86□□□□□ -0.03
PTCD3-203ENST00000409783 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.86□□□□□ -0.03
PTCD3-203ENST00000409783 IGKV2-29A2NJV5 120 aaPredicted RBP14.86□□□□□ -0.03
PTCD3-203ENST00000409783 PHOX2AO14813 284 aa14.86□□□□□ -0.03
PTCD3-203ENST00000409783 KRTAP10-2P60368 255 aa14.86□□□□□ -0.03
PTCD3-203ENST00000409783 Q0VG73 95 aa14.86□□□□□ -0.03
PTCD3-203ENST00000409783 TMEM136Q6ZRR5 245 aa14.86□□□□□ -0.03
PTCD3-203ENST00000409783 H7C423 109 aa14.85□□□□□ -0.03
PTCD3-203ENST00000409783 UBE2L6O14933 153 aa14.85□□□□□ -0.03
PTCD3-203ENST00000409783 PSCAO43653 123 aa14.85□□□□□ -0.03
PTCD3-203ENST00000409783 ORMDL3Q8N138 153 aa14.85□□□□□ -0.03
PTCD3-203ENST00000409783 LINC00269Q8N2A0 174 aa14.85□□□□□ -0.03
PTCD3-203ENST00000409783 SPATA12Q7Z6I5 190 aa14.84□□□□□ -0.03
PTCD3-203ENST00000409783 IGKV2D-24A0A075B6R9 120 aa14.83□□□□□ -0.04
PTCD3-203ENST00000409783 CRPP02741 224 aa14.83□□□□□ -0.04
PTCD3-203ENST00000409783 S100PP25815 95 aa14.83□□□□□ -0.04
PTCD3-203ENST00000409783 SVBPQ8N300 66 aa14.83□□□□□ -0.04
PTCD3-203ENST00000409783 RMI2Q96E14 147 aa14.83□□□□□ -0.04
PTCD3-203ENST00000409783 PRELID3AQ96N28 172 aa14.83□□□□□ -0.04
PTCD3-203ENST00000409783 SMIM2Q9BVW6 85 aa14.83□□□□□ -0.04
PTCD3-203ENST00000409783 COX11Q9Y6N1 276 aa14.83□□□□□ -0.04
PTCD3-203ENST00000409783 FGF6P10767 208 aa14.82□□□□□ -0.04
PTCD3-203ENST00000409783 WFDC2Q14508 124 aa14.82□□□□□ -0.04
PTCD3-203ENST00000409783 MIAQ16674 131 aa14.82□□□□□ -0.04
PTCD3-203ENST00000409783 NDUFA5Q16718 116 aa14.82□□□□□ -0.04
PTCD3-203ENST00000409783 CLPSL2Q6UWE3 100 aa14.82□□□□□ -0.04
PTCD3-203ENST00000409783 SLC7A5P1Q8MH63 180 aa14.82□□□□□ -0.04
PTCD3-203ENST00000409783 PRSS47A8MTI9 375 aa14.81□□□□□ -0.04
PTCD3-203ENST00000409783 SNAPINO95295 136 aa14.81□□□□□ -0.04
PTCD3-203ENST00000409783 REG3AQ06141 175 aa14.81□□□□□ -0.04
PTCD3-203ENST00000409783 KRTAP26-1Q6PEX3 210 aa14.81□□□□□ -0.04
PTCD3-203ENST00000409783 KIR2DL4Q99706 377 aa14.81□□□□□ -0.04
PTCD3-203ENST00000409783 FCER1GP30273 86 aa14.8□□□□□ -0.04
PTCD3-203ENST00000409783 LAMTOR2Q9Y2Q5 125 aa14.8□□□□□ -0.04
PTCD3-203ENST00000409783 LRP1BQ9NZR2 4599 aa14.8□□□□□ -0.04
PTCD3-203ENST00000409783 EREGO14944 169 aa14.79□□□□□ -0.04
PTCD3-203ENST00000409783 C1orf43Q9BWL3 253 aa14.79□□□□□ -0.04
PTCD3-203ENST00000409783 ZNF25P17030 456 aaPredicted RBP14.78□□□□□ -0.04
PTCD3-203ENST00000409783 AMMECR1LQ6DCA0 310 aa14.78□□□□□ -0.04
PTCD3-203ENST00000409783 RNASEKQ6P5S7 137 aaKnown RBP14.78□□□□□ -0.04
PTCD3-203ENST00000409783 MRPL52Q86TS9 123 aaKnown RBP14.78□□□□□ -0.04
PTCD3-203ENST00000409783 GNB1LQ9BYB4 327 aa14.78□□□□□ -0.04
PTCD3-203ENST00000409783 HLA-DQA1P01909 254 aa14.77□□□□□ -0.05
PTCD3-203ENST00000409783 FUSP35637 526 aaKnown RBP eCLIP14.77□□□□□ -0.05
PTCD3-203ENST00000409783 BAALCQ8WXS3 180 aa14.77□□□□□ -0.05
PTCD3-203ENST00000409783 PGPEP1Q9NXJ5 209 aa14.76□□□□□ -0.05
PTCD3-203ENST00000409783 C16orf90A8MZG2 172 aa14.75□□□□□ -0.05
PTCD3-203ENST00000409783 TCAPO15273 167 aa14.75□□□□□ -0.05
PTCD3-203ENST00000409783 KIAA1644Q3SXP7 199 aa14.75□□□□□ -0.05
PTCD3-203ENST00000409783 Q8N814 137 aa14.75□□□□□ -0.05
PTCD3-203ENST00000409783 TRAV8-4A0A0B4J246 113 aa14.74□□□□□ -0.05
PTCD3-203ENST00000409783 LECT2O14960 151 aa14.74□□□□□ -0.05
PTCD3-203ENST00000409783 COX19Q49B96 90 aa14.74□□□□□ -0.05
PTCD3-203ENST00000409783 UBE2D4Q9Y2X8 147 aa14.74□□□□□ -0.05
PTCD3-203ENST00000409783 IGLV10-54A0A075B6I4 117 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms