RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 AMTP48728 403 aa9.52□□□□□ -0.89
CBX3-203ENST00000409747 KRTAP10-4P60372 401 aaPredicted RBP9.52□□□□□ -0.89
CBX3-203ENST00000409747 CNBPP62633 177 aaKnown RBP9.51□□□□□ -0.89
CBX3-203ENST00000409747 SMIM15Q7Z3B0 74 aa9.51□□□□□ -0.89
CBX3-203ENST00000409747 IGLV4-60A0A075B6I1 120 aa9.51□□□□□ -0.89
CBX3-203ENST00000409747 RPL37AP61513 92 aaKnown RBP9.51□□□□□ -0.89
CBX3-203ENST00000409747 AP5S1Q9NUS5 200 aa9.51□□□□□ -0.89
CBX3-203ENST00000409747 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.5□□□□□ -0.89
CBX3-203ENST00000409747 hDV102S1A0JD36 115 aa9.5□□□□□ -0.89
CBX3-203ENST00000409747 OXTP01178 125 aa9.5□□□□□ -0.89
CBX3-203ENST00000409747 RNASE7Q9H1E1 156 aaKnown RBP9.5□□□□□ -0.89
CBX3-203ENST00000409747 TEX261Q6UWH6 196 aa9.49□□□□□ -0.89
CBX3-203ENST00000409747 TMEM250H0YL14 139 aa9.48□□□□□ -0.89
CBX3-203ENST00000409747 K7EN84 100 aa9.48□□□□□ -0.89
CBX3-203ENST00000409747 OCC1Q8TAD7 63 aa9.48□□□□□ -0.89
CBX3-203ENST00000409747 NCR2O95944 276 aa9.48□□□□□ -0.89
CBX3-203ENST00000409747 SDIM1Q6ZPB5 146 aa9.48□□□□□ -0.89
CBX3-203ENST00000409747 GATD1Q8NB37 220 aa9.48□□□□□ -0.89
CBX3-203ENST00000409747 GFRA4Q9GZZ7 299 aa9.48□□□□□ -0.89
CBX3-203ENST00000409747 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.48□□□□□ -0.89
CBX3-203ENST00000409747 IGHV3-64A0A075B6Q5 118 aa9.47□□□□□ -0.89
CBX3-203ENST00000409747 BLOC1S1P78537 153 aa9.47□□□□□ -0.89
CBX3-203ENST00000409747 LRP1Q07954 4544 aaKnown RBP9.47□□□□□ -0.89
CBX3-203ENST00000409747 FAT3Q8TDW7 4589 aa9.46□□□□□ -0.89
CBX3-203ENST00000409747 TRAV26-2A0A0B4J265 109 aa9.46□□□□□ -0.89
CBX3-203ENST00000409747 H7C423 109 aa9.46□□□□□ -0.89
CBX3-203ENST00000409747 AMMECR1LQ6DCA0 310 aa9.46□□□□□ -0.89
CBX3-203ENST00000409747 CFAP161Q6P656 301 aa9.46□□□□□ -0.89
CBX3-203ENST00000409747 GTSF1Q8WW33 167 aa9.46□□□□□ -0.89
CBX3-203ENST00000409747 A8MWL6 223 aa9.45□□□□□ -0.9
CBX3-203ENST00000409747 GATCO43716 136 aaKnown RBP9.45□□□□□ -0.9
CBX3-203ENST00000409747 APCSP02743 223 aa9.45□□□□□ -0.9
CBX3-203ENST00000409747 SERTAD4-AS1Q5TG53 156 aa9.45□□□□□ -0.9
CBX3-203ENST00000409747 FAM231DQ6ZW35 169 aa9.45□□□□□ -0.9
CBX3-203ENST00000409747 AKAP14Q86UN6 197 aa9.45□□□□□ -0.9
CBX3-203ENST00000409747 PKHD1L1Q86WI1 4243 aa9.45□□□□□ -0.9
CBX3-203ENST00000409747 CIRBPQ14011 172 aaKnown RBP9.45□□□□□ -0.9
CBX3-203ENST00000409747 CT83Q5H943 113 aa9.45□□□□□ -0.9
CBX3-203ENST00000409747 BORCS7Q96B45 105 aa9.45□□□□□ -0.9
CBX3-203ENST00000409747 RNF185Q96GF1 192 aa9.45□□□□□ -0.9
CBX3-203ENST00000409747 RPL39LQ96EH5 51 aaKnown RBP9.44□□□□□ -0.9
CBX3-203ENST00000409747 GAGE12HA6NDE8 117 aa9.43□□□□□ -0.9
CBX3-203ENST00000409747 SDHAF1A6NFY7 115 aa9.43□□□□□ -0.9
CBX3-203ENST00000409747 PANO1I0J062 215 aa9.43□□□□□ -0.9
CBX3-203ENST00000409747 RNASEKQ6P5S7 137 aaKnown RBP9.43□□□□□ -0.9
CBX3-203ENST00000409747 ALKAL2Q6UX46 152 aa9.43□□□□□ -0.9
CBX3-203ENST00000409747 Q6ZNX1 250 aa9.43□□□□□ -0.9
CBX3-203ENST00000409747 IGKV3OR2-268A0A0C4DH90 116 aa9.42□□□□□ -0.9
CBX3-203ENST00000409747 ZNF25P17030 456 aaPredicted RBP9.42□□□□□ -0.9
CBX3-203ENST00000409747 LYPD6BQ8NI32 183 aa9.42□□□□□ -0.9
CBX3-203ENST00000409747 DPH3Q96FX2 82 aa9.42□□□□□ -0.9
CBX3-203ENST00000409747 FAM210AQ96ND0 272 aa9.42□□□□□ -0.9
CBX3-203ENST00000409747 CEBPGP53567 150 aa9.42□□□□□ -0.9
CBX3-203ENST00000409747 C15orf56Q8N910 161 aa9.42□□□□□ -0.9
CBX3-203ENST00000409747 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.41□□□□□ -0.9
CBX3-203ENST00000409747 IGKV2-29A2NJV5 120 aaPredicted RBP9.41□□□□□ -0.9
CBX3-203ENST00000409747 I3L3M4 83 aa9.41□□□□□ -0.9
CBX3-203ENST00000409747 NDUFS6O75380 124 aaKnown RBP9.41□□□□□ -0.9
CBX3-203ENST00000409747 FGF6P10767 208 aa9.41□□□□□ -0.9
CBX3-203ENST00000409747 FOXA3P55318 350 aaPredicted RBP9.41□□□□□ -0.9
CBX3-203ENST00000409747 CHCHD10Q8WYQ3 142 aaPredicted RBP9.41□□□□□ -0.9
CBX3-203ENST00000409747 BTF3L4Q96K17 158 aa9.41□□□□□ -0.9
CBX3-203ENST00000409747 TRBV6-5A0A0K0K1A5 114 aa9.4□□□□□ -0.9
CBX3-203ENST00000409747 SLPIP03973 132 aa9.4□□□□□ -0.9
CBX3-203ENST00000409747 PMCHP20382 165 aa9.4□□□□□ -0.9
CBX3-203ENST00000409747 SPACA4Q8TDM5 124 aa9.4□□□□□ -0.9
CBX3-203ENST00000409747 TMEM101Q96IK0 257 aa9.4□□□□□ -0.9
CBX3-203ENST00000409747 SMIM7Q9BQ49 75 aa9.4□□□□□ -0.9
CBX3-203ENST00000409747 RPS10P46783 165 aaKnown RBP9.39□□□□□ -0.91
CBX3-203ENST00000409747 EIF5A2Q9GZV4 153 aaKnown RBP9.39□□□□□ -0.91
CBX3-203ENST00000409747 A0A087WYN8 130 aa9.39□□□□□ -0.91
CBX3-203ENST00000409747 A0A1B0GUT8 65 aa9.39□□□□□ -0.91
CBX3-203ENST00000409747 OR5A1Q8NGJ0 315 aa9.39□□□□□ -0.91
CBX3-203ENST00000409747 TSKUQ8WUA8 353 aa9.39□□□□□ -0.91
CBX3-203ENST00000409747 ST20Q9HBF5 79 aa9.39□□□□□ -0.91
CBX3-203ENST00000409747 GVQW2A0A096LPI5 108 aaPredicted RBP9.38□□□□□ -0.91
CBX3-203ENST00000409747 FAM231BA6NCW3 169 aa9.38□□□□□ -0.91
CBX3-203ENST00000409747 HIGD1CA8MV81 97 aa9.38□□□□□ -0.91
CBX3-203ENST00000409747 HNRNPA3P51991 378 aaKnown RBP9.38□□□□□ -0.91
CBX3-203ENST00000409747 HIGD2BQ4VC39 106 aa9.38□□□□□ -0.91
CBX3-203ENST00000409747 MRAP2Q96G30 205 aa9.38□□□□□ -0.91
CBX3-203ENST00000409747 TMEM191AQ9H0A3 160 aa9.38□□□□□ -0.91
CBX3-203ENST00000409747 PKIGQ9Y2B9 76 aa9.38□□□□□ -0.91
CBX3-203ENST00000409747 HMCN2Q8NDA2 5059 aa9.38□□□□□ -0.91
CBX3-203ENST00000409747 CHTF8P0CG12 524 aa9.37□□□□□ -0.91
CBX3-203ENST00000409747 LINC01551Q86U37 167 aa9.37□□□□□ -0.91
CBX3-203ENST00000409747 hCG_2014768A0A024R1R8 64 aa9.36□□□□□ -0.91
CBX3-203ENST00000409747 Q6ZRU5 148 aa9.36□□□□□ -0.91
CBX3-203ENST00000409747 C7orf33Q8WU49 177 aa9.36□□□□□ -0.91
CBX3-203ENST00000409747 OSTCQ9NRP0 149 aa9.36□□□□□ -0.91
CBX3-203ENST00000409747 PLAC8Q9NZF1 115 aa9.36□□□□□ -0.91
CBX3-203ENST00000409747 ZNF727A8MUV8 499 aa9.36□□□□□ -0.91
CBX3-203ENST00000409747 TSHBP01222 138 aa9.36□□□□□ -0.91
CBX3-203ENST00000409747 ESDP10768 282 aa9.36□□□□□ -0.91
CBX3-203ENST00000409747 COX6A2Q02221 97 aa9.36□□□□□ -0.91
CBX3-203ENST00000409747 FOXI1Q12951 378 aa9.36□□□□□ -0.91
CBX3-203ENST00000409747 TMEM242Q9NWH2 141 aa9.36□□□□□ -0.91
CBX3-203ENST00000409747 XCL1P47992 114 aa9.35□□□□□ -0.91
CBX3-203ENST00000409747 TRBV27A0A0K0K1C4 114 aa9.34□□□□□ -0.91
CBX3-203ENST00000409747 MRPL52Q86TS9 123 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms