RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 COTL1Q14019 142 aa10.2□□□□□ -0.78
CHMP3-203ENST00000409225 RASL11AQ6T310 242 aa10.2□□□□□ -0.78
CHMP3-203ENST00000409225 PRR26Q8N8Z3 221 aa10.2□□□□□ -0.78
CHMP3-203ENST00000409225 CARD19Q96LW7 228 aa10.2□□□□□ -0.78
CHMP3-203ENST00000409225 TPPP3Q9BW30 176 aa10.2□□□□□ -0.78
CHMP3-203ENST00000409225 MAP1LC3BQ9GZQ8 125 aa10.2□□□□□ -0.78
CHMP3-203ENST00000409225 FHITP49789 147 aa10.19□□□□□ -0.78
CHMP3-203ENST00000409225 SMCPP49901 116 aaPredicted RBP10.19□□□□□ -0.78
CHMP3-203ENST00000409225 AKR1C8PQ5T2L2 129 aa10.19□□□□□ -0.78
CHMP3-203ENST00000409225 S100ZQ8WXG8 99 aa10.19□□□□□ -0.78
CHMP3-203ENST00000409225 FOXI1Q12951 378 aa10.18□□□□□ -0.78
CHMP3-203ENST00000409225 BAGE2Q86Y30 109 aa10.18□□□□□ -0.78
CHMP3-203ENST00000409225 MLST8Q9BVC4 326 aa10.18□□□□□ -0.78
CHMP3-203ENST00000409225 BORCS7-ASMTA0A0B4J1R7 106 aa10.17□□□□□ -0.78
CHMP3-203ENST00000409225 MT-ND6P03923 174 aa10.17□□□□□ -0.78
CHMP3-203ENST00000409225 PRR4Q16378 134 aa10.17□□□□□ -0.78
CHMP3-203ENST00000409225 AMMECR1LQ6DCA0 310 aa10.17□□□□□ -0.78
CHMP3-203ENST00000409225 NIT2Q9NQR4 276 aa10.17□□□□□ -0.78
CHMP3-203ENST00000409225 SCO2A0A1W2PP80 73 aa10.16□□□□□ -0.78
CHMP3-203ENST00000409225 PAGE4O60829 102 aa10.16□□□□□ -0.78
CHMP3-203ENST00000409225 S100A9P06702 114 aaKnown RBP10.16□□□□□ -0.78
CHMP3-203ENST00000409225 PTTG1IPP53801 180 aa10.16□□□□□ -0.78
CHMP3-203ENST00000409225 GAGE2BQ13066 116 aa10.16□□□□□ -0.78
CHMP3-203ENST00000409225 XCL1P47992 114 aa10.15□□□□□ -0.78
CHMP3-203ENST00000409225 C1orf137Q5JT78 98 aa10.15□□□□□ -0.78
CHMP3-203ENST00000409225 RNASEKQ6P5S7 137 aaKnown RBP10.15□□□□□ -0.78
CHMP3-203ENST00000409225 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.14□□□□□ -0.79
CHMP3-203ENST00000409225 IGHV1-58A0A0C4DH39 117 aa10.14□□□□□ -0.79
CHMP3-203ENST00000409225 A0A1W2PNN7 141 aa10.14□□□□□ -0.79
CHMP3-203ENST00000409225 IGKV2-29A2NJV5 120 aaPredicted RBP10.14□□□□□ -0.79
CHMP3-203ENST00000409225 SYCNQ0VAF6 134 aa10.14□□□□□ -0.79
CHMP3-203ENST00000409225 FER1L6-AS1Q8NA97 138 aa10.14□□□□□ -0.79
CHMP3-203ENST00000409225 IGLC6P0CF74 106 aa10.13□□□□□ -0.79
CHMP3-203ENST00000409225 Q5BKY6 102 aa10.13□□□□□ -0.79
CHMP3-203ENST00000409225 LCE2AQ5TA79 106 aaPredicted RBP10.13□□□□□ -0.79
CHMP3-203ENST00000409225 LINC00299Q6ZSB3 139 aa10.13□□□□□ -0.79
CHMP3-203ENST00000409225 NDUFA13Q9P0J0 144 aa10.13□□□□□ -0.79
CHMP3-203ENST00000409225 LOC107984640A0A0U1RRK4 108 aa10.12□□□□□ -0.79
CHMP3-203ENST00000409225 LCE2BO14633 110 aa10.12□□□□□ -0.79
CHMP3-203ENST00000409225 MED28Q9H204 178 aa10.12□□□□□ -0.79
CHMP3-203ENST00000409225 ZNF561-AS1K7EIQ3 104 aa10.11□□□□□ -0.79
CHMP3-203ENST00000409225 CCL25O15444 150 aa10.11□□□□□ -0.79
CHMP3-203ENST00000409225 Q6ZNX1 250 aa10.11□□□□□ -0.79
CHMP3-203ENST00000409225 ALG5Q9Y673 324 aa10.11□□□□□ -0.79
CHMP3-203ENST00000409225 A0A1B0GV50 99 aa10.1□□□□□ -0.79
CHMP3-203ENST00000409225 PFDN1O60925 122 aa10.1□□□□□ -0.79
CHMP3-203ENST00000409225 TRGC1P0CF51 173 aa10.1□□□□□ -0.79
CHMP3-203ENST00000409225 FGF6P10767 208 aa10.1□□□□□ -0.79
CHMP3-203ENST00000409225 NTF3P20783 257 aa10.1□□□□□ -0.79
CHMP3-203ENST00000409225 DEFA1P59665 94 aa10.1□□□□□ -0.79
CHMP3-203ENST00000409225 C9orf116Q5BN46 136 aaPredicted RBP10.1□□□□□ -0.79
CHMP3-203ENST00000409225 PHF5AQ7RTV0 110 aaKnown RBP10.1□□□□□ -0.79
CHMP3-203ENST00000409225 OR2D3Q8NGH3 330 aa10.1□□□□□ -0.79
CHMP3-203ENST00000409225 OR5A1Q8NGJ0 315 aa10.1□□□□□ -0.79
CHMP3-203ENST00000409225 DIRC1Q969H9 104 aa10.1□□□□□ -0.79
CHMP3-203ENST00000409225 FXYD6-FXYD2A0A087WZ82 144 aa10.09□□□□□ -0.79
CHMP3-203ENST00000409225 BCL2P10415 239 aa10.09□□□□□ -0.79
CHMP3-203ENST00000409225 CAMPP49913 170 aa10.09□□□□□ -0.79
CHMP3-203ENST00000409225 LINC00959A0A1B0GUT2 108 aa10.08□□□□□ -0.8
CHMP3-203ENST00000409225 APCSP02743 223 aa10.08□□□□□ -0.8
CHMP3-203ENST00000409225 RPS20P60866 119 aaKnown RBP10.08□□□□□ -0.8
CHMP3-203ENST00000409225 TMUB2Q71RG4 321 aa10.08□□□□□ -0.8
CHMP3-203ENST00000409225 H7C423 109 aa10.07□□□□□ -0.8
CHMP3-203ENST00000409225 IGLV7-43P04211 117 aa10.07□□□□□ -0.8
CHMP3-203ENST00000409225 LYZL1Q6UWQ5 148 aa10.07□□□□□ -0.8
CHMP3-203ENST00000409225 ISOC2Q96AB3 205 aa10.07□□□□□ -0.8
CHMP3-203ENST00000409225 IGLV1-50A0A075B6I6 118 aa10.06□□□□□ -0.8
CHMP3-203ENST00000409225 H0Y9J4 135 aa10.06□□□□□ -0.8
CHMP3-203ENST00000409225 NCR2O95944 276 aa10.06□□□□□ -0.8
CHMP3-203ENST00000409225 RPL35P42766 123 aaKnown RBP10.06□□□□□ -0.8
CHMP3-203ENST00000409225 GATD1Q8NB37 220 aa10.06□□□□□ -0.8
CHMP3-203ENST00000409225 SFT2D1Q8WV19 159 aa10.06□□□□□ -0.8
CHMP3-203ENST00000409225 IGLV4-69A0A075B6H9 119 aa10.05□□□□□ -0.8
CHMP3-203ENST00000409225 A6NJY4 79 aa10.05□□□□□ -0.8
CHMP3-203ENST00000409225 F2Z2F3 143 aa10.05□□□□□ -0.8
CHMP3-203ENST00000409225 RPL18AQ02543 176 aaKnown RBP10.05□□□□□ -0.8
CHMP3-203ENST00000409225 RPL39LQ96EH5 51 aaKnown RBP10.05□□□□□ -0.8
CHMP3-203ENST00000409225 TMEM101Q96IK0 257 aa10.05□□□□□ -0.8
CHMP3-203ENST00000409225 BTF3L4Q96K17 158 aa10.05□□□□□ -0.8
CHMP3-203ENST00000409225 ZNF25P17030 456 aaPredicted RBP10.04□□□□□ -0.8
CHMP3-203ENST00000409225 SS18Q15532 418 aa10.04□□□□□ -0.8
CHMP3-203ENST00000409225 NUP35Q8NFH5 326 aa10.04□□□□□ -0.8
CHMP3-203ENST00000409225 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.03□□□□□ -0.8
CHMP3-203ENST00000409225 APOMO95445 188 aa10.03□□□□□ -0.8
CHMP3-203ENST00000409225 UBE2D1P51668 147 aa10.03□□□□□ -0.8
CHMP3-203ENST00000409225 EIF5AP63241 154 aaKnown RBP10.03□□□□□ -0.8
CHMP3-203ENST00000409225 MEF2BQ02080 365 aaPredicted RBP10.03□□□□□ -0.8
CHMP3-203ENST00000409225 CD164L2Q6UWJ8 174 aa10.03□□□□□ -0.8
CHMP3-203ENST00000409225 KCNRGQ8N5I3 272 aa10.03□□□□□ -0.8
CHMP3-203ENST00000409225 FAM213BQ8TBF2 198 aa10.03□□□□□ -0.8
CHMP3-203ENST00000409225 CAMK2N2Q96S95 79 aa10.03□□□□□ -0.8
CHMP3-203ENST00000409225 A0A087WZ39 114 aa10.02□□□□□ -0.81
CHMP3-203ENST00000409225 XKRY2A2RUG3 117 aa10.02□□□□□ -0.81
CHMP3-203ENST00000409225 C19orf71A6NCJ1 209 aa10.02□□□□□ -0.81
CHMP3-203ENST00000409225 IFNA1P01562 189 aa10.02□□□□□ -0.81
CHMP3-203ENST00000409225 GIPP09681 153 aaPredicted RBP10.02□□□□□ -0.81
CHMP3-203ENST00000409225 KRTAP1-4P0C5Y4 121 aa10.02□□□□□ -0.81
CHMP3-203ENST00000409225 TWIST1Q15672 202 aa10.02□□□□□ -0.81
CHMP3-203ENST00000409225 CENPWQ5EE01 88 aa10.02□□□□□ -0.81
CHMP3-203ENST00000409225 CYTL1Q9NRR1 136 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms