RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 Q6Q795 121 aa11.53□□□□□ -0.56
TOM1-203ENST00000404284 FBN2P35556 2912 aa11.52□□□□□ -0.56
TOM1-203ENST00000404284 C20orf203Q8NBC4 194 aa11.52□□□□□ -0.57
TOM1-203ENST00000404284 NTN5Q8WTR8 489 aaPredicted RBP11.52□□□□□ -0.57
TOM1-203ENST00000404284 TRGV11A0A075B6L2 103 aa11.52□□□□□ -0.57
TOM1-203ENST00000404284 CHCHD5Q9BSY4 110 aa11.52□□□□□ -0.57
TOM1-203ENST00000404284 USP9YO00507 2555 aaPredicted RBP11.51□□□□□ -0.57
TOM1-203ENST00000404284 Q6YL49 198 aa11.51□□□□□ -0.57
TOM1-203ENST00000404284 J3QQQ9 107 aa11.51□□□□□ -0.57
TOM1-203ENST00000404284 IGHV3-30P01768 117 aa11.51□□□□□ -0.57
TOM1-203ENST00000404284 IGHV3-30-5P0DP03 117 aa11.51□□□□□ -0.57
TOM1-203ENST00000404284 SLC25A29Q8N8R3 303 aa11.51□□□□□ -0.57
TOM1-203ENST00000404284 I3L3M4 83 aa11.5□□□□□ -0.57
TOM1-203ENST00000404284 KNCNA6PVL3 124 aa11.5□□□□□ -0.57
TOM1-203ENST00000404284 CFC1BP0CG36 223 aa11.5□□□□□ -0.57
TOM1-203ENST00000404284 CFC1P0CG37 223 aa11.5□□□□□ -0.57
TOM1-203ENST00000404284 CSDC2Q9Y534 153 aaKnown RBP11.5□□□□□ -0.57
TOM1-203ENST00000404284 ANKRD17O75179 2603 aaKnown RBP11.5□□□□□ -0.57
TOM1-203ENST00000404284 TMEM223A0PJW6 202 aa11.49□□□□□ -0.57
TOM1-203ENST00000404284 C18orf65Q6ZTR6 163 aa11.49□□□□□ -0.57
TOM1-203ENST00000404284 TRAV8-4A0A0B4J246 113 aa11.49□□□□□ -0.57
TOM1-203ENST00000404284 EDA2RQ9HAV5 297 aa11.49□□□□□ -0.57
TOM1-203ENST00000404284 SPANXA1Q9NS26 97 aa11.49□□□□□ -0.57
TOM1-203ENST00000404284 IGLV4-3A0A075B6K6 122 aa11.48□□□□□ -0.57
TOM1-203ENST00000404284 TEX49A0A1B0GTD5 131 aa11.48□□□□□ -0.57
TOM1-203ENST00000404284 A8MTW9 85 aa11.48□□□□□ -0.57
TOM1-203ENST00000404284 SLURP1P55000 103 aa11.48□□□□□ -0.57
TOM1-203ENST00000404284 DEFB136Q30KP8 78 aa11.48□□□□□ -0.57
TOM1-203ENST00000404284 C10orf126Q8N4M7 172 aa11.48□□□□□ -0.57
TOM1-203ENST00000404284 TMEM126AQ9H061 195 aa11.48□□□□□ -0.57
TOM1-203ENST00000404284 BEX4Q9NWD9 120 aaPredicted RBP11.48□□□□□ -0.57
TOM1-203ENST00000404284 ZNF22P17026 224 aaPredicted RBP11.48□□□□□ -0.57
TOM1-203ENST00000404284 LGALS3P17931 250 aaKnown RBP11.48□□□□□ -0.57
TOM1-203ENST00000404284 RBMY1BA6NDE4 496 aaKnown RBP11.47□□□□□ -0.57
TOM1-203ENST00000404284 RBMY1EA6NEQ0 496 aaKnown RBP11.47□□□□□ -0.57
TOM1-203ENST00000404284 RBMY1DP0C7P1 496 aaKnown RBP11.47□□□□□ -0.57
TOM1-203ENST00000404284 DEFB131AP59861 70 aa11.47□□□□□ -0.57
TOM1-203ENST00000404284 CR1P17927 2039 aa11.47□□□□□ -0.57
TOM1-203ENST00000404284 H7C2G1 150 aa11.47□□□□□ -0.57
TOM1-203ENST00000404284 LEPROTO15243 131 aa11.47□□□□□ -0.57
TOM1-203ENST00000404284 LINC00694P0DN24 101 aa11.47□□□□□ -0.57
TOM1-203ENST00000404284 IGHV4-31P0DP07 118 aa11.47□□□□□ -0.57
TOM1-203ENST00000404284 LINC01587Q99440 93 aa11.47□□□□□ -0.57
TOM1-203ENST00000404284 LOC107984640A0A0U1RRK4 108 aa11.46□□□□□ -0.57
TOM1-203ENST00000404284 PROK1P58294 105 aa11.46□□□□□ -0.57
TOM1-203ENST00000404284 FAM104AQ969W3 186 aa11.46□□□□□ -0.57
TOM1-203ENST00000404284 IGHV3-73A0A0B4J1V6 119 aa11.46□□□□□ -0.58
TOM1-203ENST00000404284 TRAV2A0A0B4J234 112 aa11.46□□□□□ -0.58
TOM1-203ENST00000404284 H3BMM0 161 aa11.46□□□□□ -0.58
TOM1-203ENST00000404284 PRO1854Q9UHT4 67 aa11.46□□□□□ -0.58
TOM1-203ENST00000404284 POLQO75417 2590 aa11.46□□□□□ -0.58
TOM1-203ENST00000404284 MYO18BQ8IUG5 2567 aa11.46□□□□□ -0.58
TOM1-203ENST00000404284 MXRA5Q9NR99 2828 aa11.46□□□□□ -0.58
TOM1-203ENST00000404284 A0A0J9YXV3 536 aa11.45□□□□□ -0.58
TOM1-203ENST00000404284 HTN1P15515 57 aa11.45□□□□□ -0.58
TOM1-203ENST00000404284 C5orf47Q569G3 176 aa11.45□□□□□ -0.58
TOM1-203ENST00000404284 NACAE9PAV3 2078 aa11.45□□□□□ -0.58
TOM1-203ENST00000404284 CREBBPQ92793 2442 aa11.45□□□□□ -0.58
TOM1-203ENST00000404284 PRM2P04554 102 aa11.45□□□□□ -0.58
TOM1-203ENST00000404284 IGHV3-64A0A075B6Q5 118 aa11.44□□□□□ -0.58
TOM1-203ENST00000404284 TMEM61Q8N0U2 210 aa11.43□□□□□ -0.58
TOM1-203ENST00000404284 PYGO1Q9Y3Y4 419 aa11.43□□□□□ -0.58
TOM1-203ENST00000404284 Q8N2B8 174 aa11.43□□□□□ -0.58
TOM1-203ENST00000404284 USP24Q9UPU5 2620 aa11.43□□□□□ -0.58
TOM1-203ENST00000404284 Q9UF83 564 aa11.42□□□□□ -0.58
TOM1-203ENST00000404284 M0R2P5 195 aa11.42□□□□□ -0.58
TOM1-203ENST00000404284 EIF4EBP3O60516 100 aaPredicted RBP11.42□□□□□ -0.58
TOM1-203ENST00000404284 DUX3Q96PT4 197 aa11.42□□□□□ -0.58
TOM1-203ENST00000404284 CD28P10747 220 aa11.41□□□□□ -0.58
TOM1-203ENST00000404284 MRPL23Q16540 153 aaKnown RBP11.41□□□□□ -0.58
TOM1-203ENST00000404284 Q6ZSN1 163 aa11.41□□□□□ -0.58
TOM1-203ENST00000404284 PRRC2AP48634 2157 aaKnown RBP11.41□□□□□ -0.58
TOM1-203ENST00000404284 A4D1N5 150 aa11.4□□□□□ -0.58
TOM1-203ENST00000404284 PRB1P04280 392 aa11.4□□□□□ -0.58
TOM1-203ENST00000404284 MRPS36P82909 103 aaKnown RBP11.4□□□□□ -0.58
TOM1-203ENST00000404284 CEMP1Q6PRD7 247 aaPredicted RBP11.4□□□□□ -0.58
TOM1-203ENST00000404284 DNAJC30Q96LL9 226 aa11.4□□□□□ -0.58
TOM1-203ENST00000404284 SPXQ9BT56 116 aa11.4□□□□□ -0.58
TOM1-203ENST00000404284 KRTAP10-9P60411 292 aa11.4□□□□□ -0.58
TOM1-203ENST00000404284 PIK3CD-AS1Q5SR53 167 aa11.4□□□□□ -0.58
TOM1-203ENST00000404284 MAP6D1Q9H9H5 199 aa11.4□□□□□ -0.58
TOM1-203ENST00000404284 ZNF415Q09FC8 603 aa11.39□□□□□ -0.59
TOM1-203ENST00000404284 LINC01620Q4KN68 170 aa11.39□□□□□ -0.59
TOM1-203ENST00000404284 FAM208BQ5VWN6 2430 aa11.39□□□□□ -0.59
TOM1-203ENST00000404284 C4orf3Q8WVX3 66 aa11.39□□□□□ -0.59
TOM1-203ENST00000404284 PEMTQ9UBM1 199 aa11.39□□□□□ -0.59
TOM1-203ENST00000404284 SMIM9A6NGZ8 99 aa11.39□□□□□ -0.59
TOM1-203ENST00000404284 IGHV3-30-3P0DP02 117 aa11.39□□□□□ -0.59
TOM1-203ENST00000404284 C11orf72Q8NBR9 251 aa11.39□□□□□ -0.59
TOM1-203ENST00000404284 UBE2WQ96B02 151 aa11.39□□□□□ -0.59
TOM1-203ENST00000404284 CHCHD7Q9BUK0 85 aa11.39□□□□□ -0.59
TOM1-203ENST00000404284 ZFYVE26Q68DK2 2539 aa11.38□□□□□ -0.59
TOM1-203ENST00000404284 Q1RN00 199 aa11.38□□□□□ -0.59
TOM1-203ENST00000404284 A0A0J9YXY3 114 aa11.38□□□□□ -0.59
TOM1-203ENST00000404284 RPL13AP40429 203 aaKnown RBP11.38□□□□□ -0.59
TOM1-203ENST00000404284 RNASE13Q5GAN3 156 aaKnown RBP11.38□□□□□ -0.59
TOM1-203ENST00000404284 MUSTN1Q8IVN3 82 aa11.38□□□□□ -0.59
TOM1-203ENST00000404284 TMEM263Q8WUH6 116 aaKnown RBP11.38□□□□□ -0.59
TOM1-203ENST00000404284 IGHV3-33P01772 117 aa11.37□□□□□ -0.59
TOM1-203ENST00000404284 PTPN13Q12923 2485 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms