RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 FAM240AA0A1B0GVK7 77 aa6.2□□□□□ -1.42
SPTLC3-201ENST00000399002 CLUHP3Q96NS8 147 aa6.2□□□□□ -1.42
SPTLC3-201ENST00000399002 IGKV2D-26A0A0A0MRZ7 120 aa6.2□□□□□ -1.42
SPTLC3-201ENST00000399002 MT-ATP8P03928 68 aa6.2□□□□□ -1.42
SPTLC3-201ENST00000399002 PTH2Q96A98 100 aa6.2□□□□□ -1.42
SPTLC3-201ENST00000399002 RNF183Q96D59 192 aa6.2□□□□□ -1.42
SPTLC3-201ENST00000399002 ESM1Q9NQ30 184 aa6.2□□□□□ -1.42
SPTLC3-201ENST00000399002 LINC00474Q9P2X8 69 aa6.2□□□□□ -1.42
SPTLC3-201ENST00000399002 UBE2D1P51668 147 aa6.2□□□□□ -1.42
SPTLC3-201ENST00000399002 DEFB1P60022 68 aa6.2□□□□□ -1.42
SPTLC3-201ENST00000399002 Q6JHZ5 121 aa6.2□□□□□ -1.42
SPTLC3-201ENST00000399002 ZNF580Q9UK33 172 aa6.2□□□□□ -1.42
SPTLC3-201ENST00000399002 KNTC1P50748 2209 aa6.2□□□□□ -1.42
SPTLC3-201ENST00000399002 DEFB131BA0A096LNP1 70 aa6.2□□□□□ -1.42
SPTLC3-201ENST00000399002 USP17L23D6RBM5 183 aa6.2□□□□□ -1.42
SPTLC3-201ENST00000399002 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.2□□□□□ -1.42
SPTLC3-201ENST00000399002 SERP2Q8N6R1 65 aa6.2□□□□□ -1.42
SPTLC3-201ENST00000399002 IGLV4-69A0A075B6H9 119 aa6.2□□□□□ -1.42
SPTLC3-201ENST00000399002 CRIP2P52943 208 aaPredicted RBP6.2□□□□□ -1.42
SPTLC3-201ENST00000399002 CASC2Q6XLA1 102 aa6.19□□□□□ -1.42
SPTLC3-201ENST00000399002 LOC107984640A0A0U1RRK4 108 aa6.19□□□□□ -1.42
SPTLC3-201ENST00000399002 SYCNQ0VAF6 134 aa6.19□□□□□ -1.42
SPTLC3-201ENST00000399002 SDIM1Q6ZPB5 146 aa6.19□□□□□ -1.42
SPTLC3-201ENST00000399002 Q8IZM0 81 aa6.19□□□□□ -1.42
SPTLC3-201ENST00000399002 EML6Q6ZMW3 1958 aa6.19□□□□□ -1.42
SPTLC3-201ENST00000399002 K7ERS5 55 aa6.19□□□□□ -1.42
SPTLC3-201ENST00000399002 ENHOQ6UWT2 76 aa6.19□□□□□ -1.42
SPTLC3-201ENST00000399002 MAPKAPK5-AS1Q8N8E1 139 aa6.19□□□□□ -1.42
SPTLC3-201ENST00000399002 PRB1P04280 392 aa6.18□□□□□ -1.42
SPTLC3-201ENST00000399002 C7orf33Q8WU49 177 aa6.18□□□□□ -1.42
SPTLC3-201ENST00000399002 NRGNQ92686 78 aa6.18□□□□□ -1.42
SPTLC3-201ENST00000399002 NDUFA7O95182 113 aa6.18□□□□□ -1.42
SPTLC3-201ENST00000399002 Q6ZSV7 163 aa6.18□□□□□ -1.42
SPTLC3-201ENST00000399002 ALPK3Q96L96 1907 aa6.18□□□□□ -1.42
SPTLC3-201ENST00000399002 DEFB4AO15263 64 aa6.18□□□□□ -1.42
SPTLC3-201ENST00000399002 RNASE3P12724 160 aaKnown RBP6.18□□□□□ -1.42
SPTLC3-201ENST00000399002 C2orf91Q6ZV80 131 aa6.18□□□□□ -1.42
SPTLC3-201ENST00000399002 CHCHD7Q9BUK0 85 aa6.18□□□□□ -1.42
SPTLC3-201ENST00000399002 POLR2KP53803 58 aaKnown RBP6.18□□□□□ -1.42
SPTLC3-201ENST00000399002 MYO7BQ6PIF6 2116 aa6.18□□□□□ -1.42
SPTLC3-201ENST00000399002 BRK1Q8WUW1 75 aa6.18□□□□□ -1.42
SPTLC3-201ENST00000399002 C19orf84I3L1E1 186 aa6.17□□□□□ -1.42
SPTLC3-201ENST00000399002 SEC16AO15027 2179 aa6.17□□□□□ -1.42
SPTLC3-201ENST00000399002 NOTCH4Q99466 2003 aa6.17□□□□□ -1.42
SPTLC3-201ENST00000399002 RP1P56715 2156 aa6.17□□□□□ -1.42
SPTLC3-201ENST00000399002 LINC00959A0A1B0GUT2 108 aa6.17□□□□□ -1.42
SPTLC3-201ENST00000399002 COX8CQ7Z4L0 72 aa6.17□□□□□ -1.42
SPTLC3-201ENST00000399002 LINC01561Q8N1V8 128 aa6.16□□□□□ -1.42
SPTLC3-201ENST00000399002 CACNA1IQ9P0X4 2223 aa6.16□□□□□ -1.42
SPTLC3-201ENST00000399002 MRPS12O15235 138 aaKnown RBP6.16□□□□□ -1.42
SPTLC3-201ENST00000399002 SPTSSBQ8NFR3 76 aa6.16□□□□□ -1.42
SPTLC3-201ENST00000399002 M0QXV9 152 aa6.16□□□□□ -1.42
SPTLC3-201ENST00000399002 UBE2D3P61077 147 aa6.16□□□□□ -1.42
SPTLC3-201ENST00000399002 UBE2D2P62837 147 aa6.16□□□□□ -1.42
SPTLC3-201ENST00000399002 C10orf142B7Z368 130 aa6.16□□□□□ -1.42
SPTLC3-201ENST00000399002 PLA2G5P39877 138 aa6.16□□□□□ -1.42
SPTLC3-201ENST00000399002 C20orf197Q8N268 126 aa6.16□□□□□ -1.42
SPTLC3-201ENST00000399002 ASCC3Q8N3C0 2202 aaKnown RBP6.15□□□□□ -1.42
SPTLC3-201ENST00000399002 COX7CP15954 63 aa6.15□□□□□ -1.42
SPTLC3-201ENST00000399002 HIGD2AQ9BW72 106 aa6.15□□□□□ -1.42
SPTLC3-201ENST00000399002 CCKP06307 115 aa6.15□□□□□ -1.43
SPTLC3-201ENST00000399002 DCANP1Q8TF63 244 aa6.15□□□□□ -1.43
SPTLC3-201ENST00000399002 HEATR1Q9H583 2144 aaKnown RBP6.15□□□□□ -1.43
SPTLC3-201ENST00000399002 RBX1P62877 108 aa6.14□□□□□ -1.43
SPTLC3-201ENST00000399002 C6orf99Q4VX62 202 aa6.14□□□□□ -1.43
SPTLC3-201ENST00000399002 FAM19A3Q7Z5A8 133 aa6.14□□□□□ -1.43
SPTLC3-201ENST00000399002 A0A087WZ39 114 aa6.14□□□□□ -1.43
SPTLC3-201ENST00000399002 PRO3102Q9H379 93 aa6.14□□□□□ -1.43
SPTLC3-201ENST00000399002 FAM19A5Q7Z5A7 132 aaPredicted RBP6.14□□□□□ -1.43
SPTLC3-201ENST00000399002 SMIM11BQ8TCY0 68 aa6.14□□□□□ -1.43
SPTLC3-201ENST00000399002 IGKV2-24A0A0C4DH68 120 aa6.13□□□□□ -1.43
SPTLC3-201ENST00000399002 DYSFO75923 2080 aa6.13□□□□□ -1.43
SPTLC3-201ENST00000399002 CABIN1Q9Y6J0 2220 aa6.13□□□□□ -1.43
SPTLC3-201ENST00000399002 DOCK8Q8NF50 2099 aa6.13□□□□□ -1.43
SPTLC3-201ENST00000399002 IGIPA6NJ69 53 aa6.13□□□□□ -1.43
SPTLC3-201ENST00000399002 SLPIP03973 132 aa6.13□□□□□ -1.43
SPTLC3-201ENST00000399002 Q8N976 141 aa6.13□□□□□ -1.43
SPTLC3-201ENST00000399002 CDC42SE2Q9NRR3 84 aa6.13□□□□□ -1.43
SPTLC3-201ENST00000399002 COL5A1P20908 1838 aaPredicted RBP6.13□□□□□ -1.43
SPTLC3-201ENST00000399002 ZNF73O43830 326 aaPredicted RBP6.13□□□□□ -1.43
SPTLC3-201ENST00000399002 PRR9Q5T870 116 aa6.12□□□□□ -1.43
SPTLC3-201ENST00000399002 BBC3Q96PG8 261 aaPredicted RBP6.12□□□□□ -1.43
SPTLC3-201ENST00000399002 CSDC2Q9Y534 153 aaKnown RBP6.12□□□□□ -1.43
SPTLC3-201ENST00000399002 C16orf95Q9H693 158 aa6.11□□□□□ -1.43
SPTLC3-201ENST00000399002 WISP2O76076 250 aa6.11□□□□□ -1.43
SPTLC3-201ENST00000399002 RPL28P46779 137 aaKnown RBP6.11□□□□□ -1.43
SPTLC3-201ENST00000399002 KIAA2026Q5HYC2 2103 aa6.11□□□□□ -1.43
SPTLC3-201ENST00000399002 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.11□□□□□ -1.43
SPTLC3-201ENST00000399002 C11orf21Q9P2W6 132 aa6.11□□□□□ -1.43
SPTLC3-201ENST00000399002 DOCK11Q5JSL3 2073 aa6.11□□□□□ -1.43
SPTLC3-201ENST00000399002 EGFEM1PQ0D2K5 195 aa6.11□□□□□ -1.43
SPTLC3-201ENST00000399002 TRAV7A0A075B6U4 112 aa6.1□□□□□ -1.43
SPTLC3-201ENST00000399002 PROK1P58294 105 aa6.1□□□□□ -1.43
SPTLC3-201ENST00000399002 KPRPQ5T749 579 aaPredicted RBP6.1□□□□□ -1.43
SPTLC3-201ENST00000399002 CNTRLQ7Z7A1 2325 aa6.1□□□□□ -1.43
SPTLC3-201ENST00000399002 WFDC10BQ8IUB3 73 aa6.1□□□□□ -1.43
SPTLC3-201ENST00000399002 C10orf25Q5T742 122 aa6.1□□□□□ -1.43
SPTLC3-201ENST00000399002 ZNF843Q8N446 348 aa6.1□□□□□ -1.43
SPTLC3-201ENST00000399002 SERP1Q9Y6X1 66 aa6.1□□□□□ -1.43
SPTLC3-201ENST00000399002 ATG2AQ2TAZ0 1938 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms