RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 ATP5L2Q7Z4Y8 100 aa17■□□□□ 0.31
TSPAN4-207ENST00000397411 CKS2P33552 79 aa16.99■□□□□ 0.31
TSPAN4-207ENST00000397411 RBX1P62877 108 aa16.99■□□□□ 0.31
TSPAN4-207ENST00000397411 Q0VG73 95 aa16.99■□□□□ 0.31
TSPAN4-207ENST00000397411 SPATA12Q7Z6I5 190 aa16.99■□□□□ 0.31
TSPAN4-207ENST00000397411 Q8N976 141 aa16.99■□□□□ 0.31
TSPAN4-207ENST00000397411 COX11Q9Y6N1 276 aa16.98■□□□□ 0.31
TSPAN4-207ENST00000397411 IGKV2D-24A0A075B6R9 120 aa16.97■□□□□ 0.31
TSPAN4-207ENST00000397411 A0A1B0GXF2 115 aa16.97■□□□□ 0.31
TSPAN4-207ENST00000397411 APCSP02743 223 aa16.97■□□□□ 0.31
TSPAN4-207ENST00000397411 RPS10P46783 165 aaKnown RBP16.97■□□□□ 0.31
TSPAN4-207ENST00000397411 CTDSP1Q9GZU7 261 aa16.97■□□□□ 0.31
TSPAN4-207ENST00000397411 FAT2Q9NYQ8 4349 aa16.97■□□□□ 0.31
TSPAN4-207ENST00000397411 A0A087WTM6 91 aa16.96■□□□□ 0.31
TSPAN4-207ENST00000397411 TMEM70Q9BUB7 260 aa16.96■□□□□ 0.31
TSPAN4-207ENST00000397411 BTF3L4Q96K17 158 aa16.95■□□□□ 0.3
TSPAN4-207ENST00000397411 C16orf90A8MZG2 172 aa16.94■□□□□ 0.3
TSPAN4-207ENST00000397411 VCYO14598 125 aa16.94■□□□□ 0.3
TSPAN4-207ENST00000397411 POLR2KP53803 58 aaKnown RBP16.93■□□□□ 0.3
TSPAN4-207ENST00000397411 NDUFA5Q16718 116 aa16.93■□□□□ 0.3
TSPAN4-207ENST00000397411 AMMECR1LQ6DCA0 310 aa16.93■□□□□ 0.3
TSPAN4-207ENST00000397411 IMMP2LQ96T52 175 aa16.93■□□□□ 0.3
TSPAN4-207ENST00000397411 FCER1GP30273 86 aa16.92■□□□□ 0.3
TSPAN4-207ENST00000397411 SUMO2P61956 95 aaKnown RBP16.92■□□□□ 0.3
TSPAN4-207ENST00000397411 LINC00269Q8N2A0 174 aa16.92■□□□□ 0.3
TSPAN4-207ENST00000397411 NRACQ8N912 160 aa16.92■□□□□ 0.3
TSPAN4-207ENST00000397411 C1orf43Q9BWL3 253 aa16.92■□□□□ 0.3
TSPAN4-207ENST00000397411 TMEM242Q9NWH2 141 aa16.92■□□□□ 0.3
TSPAN4-207ENST00000397411 CARHSP1Q9Y2V2 147 aaKnown RBP16.92■□□□□ 0.3
TSPAN4-207ENST00000397411 A0A1B0GUV1 79 aa16.91■□□□□ 0.3
TSPAN4-207ENST00000397411 CLPSL2Q6UWE3 100 aa16.91■□□□□ 0.3
TSPAN4-207ENST00000397411 ENHOQ6UWT2 76 aa16.91■□□□□ 0.3
TSPAN4-207ENST00000397411 D6R8Y8 96 aa16.9■□□□□ 0.3
TSPAN4-207ENST00000397411 PPBPP02775 128 aa16.9■□□□□ 0.3
TSPAN4-207ENST00000397411 S100PP25815 95 aa16.9■□□□□ 0.3
TSPAN4-207ENST00000397411 C10orf91Q5T1B1 145 aa16.9■□□□□ 0.3
TSPAN4-207ENST00000397411 RNASEKQ6P5S7 137 aaKnown RBP16.9■□□□□ 0.3
TSPAN4-207ENST00000397411 PGPEP1Q9NXJ5 209 aa16.9■□□□□ 0.3
TSPAN4-207ENST00000397411 BIRC6Q9NR09 4857 aa16.9■□□□□ 0.3
TSPAN4-207ENST00000397411 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.89■□□□□ 0.29
TSPAN4-207ENST00000397411 TRBV27A0A0K0K1C4 114 aa16.89■□□□□ 0.29
TSPAN4-207ENST00000397411 IGKV2-29A2NJV5 120 aaPredicted RBP16.89■□□□□ 0.29
TSPAN4-207ENST00000397411 H7C423 109 aa16.89■□□□□ 0.29
TSPAN4-207ENST00000397411 TSHBP01222 138 aa16.89■□□□□ 0.29
TSPAN4-207ENST00000397411 KRTAP10-2P60368 255 aa16.89■□□□□ 0.29
TSPAN4-207ENST00000397411 MIAQ16674 131 aa16.89■□□□□ 0.29
TSPAN4-207ENST00000397411 KIR2DL4Q99706 377 aa16.89■□□□□ 0.29
TSPAN4-207ENST00000397411 C20orf78Q9BR46 151 aa16.89■□□□□ 0.29
TSPAN4-207ENST00000397411 C7orf77A4D0Y5 90 aa16.88■□□□□ 0.29
TSPAN4-207ENST00000397411 TNFRSF6BO95407 300 aa16.88■□□□□ 0.29
TSPAN4-207ENST00000397411 RHEBQ15382 184 aa16.88■□□□□ 0.29
TSPAN4-207ENST00000397411 TMEM136Q6ZRR5 245 aa16.88■□□□□ 0.29
TSPAN4-207ENST00000397411 IGLV4-60A0A075B6I1 120 aa16.87■□□□□ 0.29
TSPAN4-207ENST00000397411 LRCOL1A6NCL2 159 aa16.87■□□□□ 0.29
TSPAN4-207ENST00000397411 REG3AQ06141 175 aa16.87■□□□□ 0.29
TSPAN4-207ENST00000397411 ORMDL3Q8N138 153 aa16.87■□□□□ 0.29
TSPAN4-207ENST00000397411 C20orf203Q8NBC4 194 aa16.87■□□□□ 0.29
TSPAN4-207ENST00000397411 CLRN3Q8NCR9 226 aa16.87■□□□□ 0.29
TSPAN4-207ENST00000397411 RPS10P5Q9NQ39 176 aa16.87■□□□□ 0.29
TSPAN4-207ENST00000397411 HECTD4Q9Y4D8 3996 aa16.86■□□□□ 0.29
TSPAN4-207ENST00000397411 BAALCQ8WXS3 180 aa16.86■□□□□ 0.29
TSPAN4-207ENST00000397411 TMEM101Q96IK0 257 aa16.86■□□□□ 0.29
TSPAN4-207ENST00000397411 PKD1P98161 4303 aa16.86■□□□□ 0.29
TSPAN4-207ENST00000397411 TRBV24-1A0A075B6N3 115 aa16.85■□□□□ 0.29
TSPAN4-207ENST00000397411 TRAV9-1A0A075B6T8 112 aa16.85■□□□□ 0.29
TSPAN4-207ENST00000397411 FGF6P10767 208 aa16.85■□□□□ 0.29
TSPAN4-207ENST00000397411 PRELID3AQ96N28 172 aa16.85■□□□□ 0.29
TSPAN4-207ENST00000397411 PRR34Q9NV39 138 aa16.85■□□□□ 0.29
TSPAN4-207ENST00000397411 LECT2O14960 151 aa16.84■□□□□ 0.29
TSPAN4-207ENST00000397411 PHOX2AO14813 284 aa16.83■□□□□ 0.28
TSPAN4-207ENST00000397411 NPYP01303 97 aa16.83■□□□□ 0.28
TSPAN4-207ENST00000397411 APOC3P02656 99 aa16.83■□□□□ 0.28
TSPAN4-207ENST00000397411 ESDP10768 282 aa16.83■□□□□ 0.28
TSPAN4-207ENST00000397411 FUSP35637 526 aaKnown RBP eCLIP16.83■□□□□ 0.28
TSPAN4-207ENST00000397411 SVBPQ8N300 66 aa16.83■□□□□ 0.28
TSPAN4-207ENST00000397411 CDPF1Q6NVV7 123 aa16.82■□□□□ 0.28
TSPAN4-207ENST00000397411 Q8N814 137 aa16.82■□□□□ 0.28
TSPAN4-207ENST00000397411 MAPKAPK5-AS1Q8N8E1 139 aa16.82■□□□□ 0.28
TSPAN4-207ENST00000397411 IGKV3OR2-268A0A0C4DH90 116 aa16.81■□□□□ 0.28
TSPAN4-207ENST00000397411 TCAPO15273 167 aa16.81■□□□□ 0.28
TSPAN4-207ENST00000397411 SNAPINO95295 136 aa16.81■□□□□ 0.28
TSPAN4-207ENST00000397411 ZNF25P17030 456 aaPredicted RBP16.81■□□□□ 0.28
TSPAN4-207ENST00000397411 DGAT2L7PQ6IED9 249 aa16.81■□□□□ 0.28
TSPAN4-207ENST00000397411 SMIM2Q9BVW6 85 aa16.81■□□□□ 0.28
TSPAN4-207ENST00000397411 IGLV10-54A0A075B6I4 117 aa16.8■□□□□ 0.28
TSPAN4-207ENST00000397411 TRAV8-4A0A0B4J246 113 aa16.8■□□□□ 0.28
TSPAN4-207ENST00000397411 HLA-DQA1P01909 254 aa16.8■□□□□ 0.28
TSPAN4-207ENST00000397411 RPL32P62910 135 aaKnown RBP16.8■□□□□ 0.28
TSPAN4-207ENST00000397411 SMAGPQ0VAQ4 97 aa16.8■□□□□ 0.28
TSPAN4-207ENST00000397411 OR5A1Q8NGJ0 315 aa16.8■□□□□ 0.28
TSPAN4-207ENST00000397411 TMEM18Q96B42 140 aa16.79■□□□□ 0.28
TSPAN4-207ENST00000397411 IGLV5-52A0A0A0MRZ9 124 aa16.78■□□□□ 0.28
TSPAN4-207ENST00000397411 WFDC2Q14508 124 aa16.78■□□□□ 0.28
TSPAN4-207ENST00000397411 NTN5Q8WTR8 489 aaPredicted RBP16.78■□□□□ 0.28
TSPAN4-207ENST00000397411 LAMTOR2Q9Y2Q5 125 aa16.78■□□□□ 0.28
TSPAN4-207ENST00000397411 RAB5AP20339 215 aa16.77■□□□□ 0.28
TSPAN4-207ENST00000397411 MAP1LC3AQ9H492 121 aa16.77■□□□□ 0.28
TSPAN4-207ENST00000397411 LOC389332A0A1B0GUA5 103 aa16.76■□□□□ 0.27
TSPAN4-207ENST00000397411 COX19Q49B96 90 aa16.75■□□□□ 0.27
TSPAN4-207ENST00000397411 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms