RNA–Protein interactions for RNA: ENST00000396039.1

PARD6B-202, Transcript of par-6 family cell polarity regulator beta, humanhuman

TSL 1 (best) BASIC

Gene PARD6B, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD6B-202ENST00000396039 HMCN2Q8NDA2 5059 aa14.18□□□□□ -0.14
PARD6B-202ENST00000396039 IGLV10-54A0A075B6I4 117 aa14.17□□□□□ -0.14
PARD6B-202ENST00000396039 IGHV3-64A0A075B6Q5 118 aa14.17□□□□□ -0.14
PARD6B-202ENST00000396039 C19orf71A6NCJ1 209 aa14.17□□□□□ -0.14
PARD6B-202ENST00000396039 BLOC1S1P78537 153 aa14.17□□□□□ -0.14
PARD6B-202ENST00000396039 CCL20P78556 96 aa14.17□□□□□ -0.14
PARD6B-202ENST00000396039 C20orf203Q8NBC4 194 aa14.17□□□□□ -0.14
PARD6B-202ENST00000396039 DPH3P1Q9H4G8 78 aa14.17□□□□□ -0.14
PARD6B-202ENST00000396039 PDE6DO43924 150 aa14.16□□□□□ -0.14
PARD6B-202ENST00000396039 CIRBPQ14011 172 aaKnown RBP14.16□□□□□ -0.14
PARD6B-202ENST00000396039 NIT2Q9NQR4 276 aa14.16□□□□□ -0.14
PARD6B-202ENST00000396039 COTL1Q14019 142 aa14.15□□□□□ -0.14
PARD6B-202ENST00000396039 Q6ZRU5 148 aa14.15□□□□□ -0.14
PARD6B-202ENST00000396039 IFNA1P01562 189 aa14.14□□□□□ -0.15
PARD6B-202ENST00000396039 MEF2BQ02080 365 aaPredicted RBP14.13□□□□□ -0.15
PARD6B-202ENST00000396039 CFAP161Q6P656 301 aa14.13□□□□□ -0.15
PARD6B-202ENST00000396039 IGLV4-60A0A075B6I1 120 aa14.12□□□□□ -0.15
PARD6B-202ENST00000396039 AMTP48728 403 aa14.12□□□□□ -0.15
PARD6B-202ENST00000396039 HNRNPA3P51991 378 aaKnown RBP14.12□□□□□ -0.15
PARD6B-202ENST00000396039 PANO1I0J062 215 aa14.11□□□□□ -0.15
PARD6B-202ENST00000396039 LYZL1Q6UWQ5 148 aa14.11□□□□□ -0.15
PARD6B-202ENST00000396039 DPH3Q96FX2 82 aa14.11□□□□□ -0.15
PARD6B-202ENST00000396039 NTF3P20783 257 aa14.1□□□□□ -0.15
PARD6B-202ENST00000396039 RAB19A4D1S5 217 aa14.09□□□□□ -0.15
PARD6B-202ENST00000396039 TAGLN2P37802 199 aaKnown RBP14.09□□□□□ -0.15
PARD6B-202ENST00000396039 CTRLP40313 264 aa14.09□□□□□ -0.15
PARD6B-202ENST00000396039 CLLU1Q5K131 121 aa14.09□□□□□ -0.15
PARD6B-202ENST00000396039 MED9Q9NWA0 146 aa14.09□□□□□ -0.15
PARD6B-202ENST00000396039 SPACA4Q8TDM5 124 aa14.08□□□□□ -0.16
PARD6B-202ENST00000396039 CNFNQ9BYD5 112 aa14.08□□□□□ -0.16
PARD6B-202ENST00000396039 GFRA4Q9GZZ7 299 aa14.07□□□□□ -0.16
PARD6B-202ENST00000396039 A0A087WYN8 130 aa14.06□□□□□ -0.16
PARD6B-202ENST00000396039 H7C423 109 aa14.06□□□□□ -0.16
PARD6B-202ENST00000396039 NCR2O95944 276 aa14.06□□□□□ -0.16
PARD6B-202ENST00000396039 BCL2P10415 239 aa14.06□□□□□ -0.16
PARD6B-202ENST00000396039 TWIST1Q15672 202 aa14.06□□□□□ -0.16
PARD6B-202ENST00000396039 SMIM15Q7Z3B0 74 aa14.06□□□□□ -0.16
PARD6B-202ENST00000396039 C7orf33Q8WU49 177 aa14.06□□□□□ -0.16
PARD6B-202ENST00000396039 AMMECR1LQ6DCA0 310 aa14.05□□□□□ -0.16
PARD6B-202ENST00000396039 TRBV20OR9-2A0A075B6H5 130 aa14.04□□□□□ -0.16
PARD6B-202ENST00000396039 NUDT10Q8NFP7 164 aa14.04□□□□□ -0.16
PARD6B-202ENST00000396039 NUDT11Q96G61 164 aa14.04□□□□□ -0.16
PARD6B-202ENST00000396039 PLAC8Q9NZF1 115 aa14.04□□□□□ -0.16
PARD6B-202ENST00000396039 PKIGQ9Y2B9 76 aa14.04□□□□□ -0.16
PARD6B-202ENST00000396039 GAGE12HA6NDE8 117 aa14.03□□□□□ -0.16
PARD6B-202ENST00000396039 SLPIP03973 132 aa14.03□□□□□ -0.16
PARD6B-202ENST00000396039 RPS10P46783 165 aaKnown RBP14.03□□□□□ -0.16
PARD6B-202ENST00000396039 C15orf56Q8N910 161 aa14.03□□□□□ -0.16
PARD6B-202ENST00000396039 RPP21Q9H633 154 aaKnown RBP14.03□□□□□ -0.16
PARD6B-202ENST00000396039 NDUFS6O75380 124 aaKnown RBP14.01□□□□□ -0.17
PARD6B-202ENST00000396039 APCSP02743 223 aa14.01□□□□□ -0.17
PARD6B-202ENST00000396039 CHTF8P0CG12 524 aa14.01□□□□□ -0.17
PARD6B-202ENST00000396039 MT1HL1P0DM35 61 aa14.01□□□□□ -0.17
PARD6B-202ENST00000396039 NDUFA5Q16718 116 aa14.01□□□□□ -0.17
PARD6B-202ENST00000396039 GATD1Q8NB37 220 aa14.01□□□□□ -0.17
PARD6B-202ENST00000396039 IGKV3OR2-268A0A0C4DH90 116 aa14□□□□□ -0.17
PARD6B-202ENST00000396039 ZNF25P17030 456 aaPredicted RBP14□□□□□ -0.17
PARD6B-202ENST00000396039 LYPD6BQ8NI32 183 aa14□□□□□ -0.17
PARD6B-202ENST00000396039 RNASEKQ6P5S7 137 aaKnown RBP13.99□□□□□ -0.17
PARD6B-202ENST00000396039 CHCHD10Q8WYQ3 142 aaPredicted RBP13.99□□□□□ -0.17
PARD6B-202ENST00000396039 FAM210AQ96ND0 272 aa13.99□□□□□ -0.17
PARD6B-202ENST00000396039 UBR4Q5T4S7 5183 aa13.98□□□□□ -0.17
PARD6B-202ENST00000396039 COX6A2Q02221 97 aa13.98□□□□□ -0.17
PARD6B-202ENST00000396039 GVQW2A0A096LPI5 108 aaPredicted RBP13.97□□□□□ -0.17
PARD6B-202ENST00000396039 TRAV26-2A0A0B4J265 109 aa13.97□□□□□ -0.17
PARD6B-202ENST00000396039 PHOX2AO14813 284 aa13.97□□□□□ -0.17
PARD6B-202ENST00000396039 RNASE7Q9H1E1 156 aaKnown RBP13.97□□□□□ -0.17
PARD6B-202ENST00000396039 LINC00474Q9P2X8 69 aa13.97□□□□□ -0.17
PARD6B-202ENST00000396039 LINC00862A6NCI5 91 aa13.96□□□□□ -0.17
PARD6B-202ENST00000396039 HIGD2BQ4VC39 106 aa13.96□□□□□ -0.17
PARD6B-202ENST00000396039 BTF3L4Q96K17 158 aa13.96□□□□□ -0.17
PARD6B-202ENST00000396039 EIF5A2Q9GZV4 153 aaKnown RBP13.96□□□□□ -0.17
PARD6B-202ENST00000396039 SDHAF1A6NFY7 115 aa13.95□□□□□ -0.18
PARD6B-202ENST00000396039 FGF6P10767 208 aa13.95□□□□□ -0.18
PARD6B-202ENST00000396039 MAJINQ3KP22 176 aa13.95□□□□□ -0.18
PARD6B-202ENST00000396039 OR5A1Q8NGJ0 315 aa13.95□□□□□ -0.18
PARD6B-202ENST00000396039 TMEM101Q96IK0 257 aa13.95□□□□□ -0.18
PARD6B-202ENST00000396039 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.94□□□□□ -0.18
PARD6B-202ENST00000396039 IGKV2-29A2NJV5 120 aaPredicted RBP13.94□□□□□ -0.18
PARD6B-202ENST00000396039 PEA15Q15121 130 aa13.94□□□□□ -0.18
PARD6B-202ENST00000396039 COMMD7Q86VX2 200 aa13.94□□□□□ -0.18
PARD6B-202ENST00000396039 RPL39LQ96EH5 51 aaKnown RBP13.94□□□□□ -0.18
PARD6B-202ENST00000396039 IGKV2-24A0A0C4DH68 120 aa13.93□□□□□ -0.18
PARD6B-202ENST00000396039 A8MWL6 223 aa13.93□□□□□ -0.18
PARD6B-202ENST00000396039 I3L3M4 83 aa13.93□□□□□ -0.18
PARD6B-202ENST00000396039 K7EN84 100 aa13.93□□□□□ -0.18
PARD6B-202ENST00000396039 OCC1Q8TAD7 63 aa13.93□□□□□ -0.18
PARD6B-202ENST00000396039 PMCHP20382 165 aa13.92□□□□□ -0.18
PARD6B-202ENST00000396039 STPG4Q8N801 248 aa13.92□□□□□ -0.18
PARD6B-202ENST00000396039 PRSS3P2Q8NHM4 247 aa13.92□□□□□ -0.18
PARD6B-202ENST00000396039 GTSF1Q8WW33 167 aa13.92□□□□□ -0.18
PARD6B-202ENST00000396039 BORCS7Q96B45 105 aa13.92□□□□□ -0.18
PARD6B-202ENST00000396039 TRBV6-5A0A0K0K1A5 114 aa13.91□□□□□ -0.18
PARD6B-202ENST00000396039 TMEM250H0YL14 139 aa13.91□□□□□ -0.18
PARD6B-202ENST00000396039 GATCO43716 136 aaKnown RBP13.91□□□□□ -0.18
PARD6B-202ENST00000396039 FOXI1Q12951 378 aa13.91□□□□□ -0.18
PARD6B-202ENST00000396039 FAM231DQ6ZW35 169 aa13.91□□□□□ -0.18
PARD6B-202ENST00000396039 SMDT1Q9H4I9 107 aa13.91□□□□□ -0.18
PARD6B-202ENST00000396039 IGHV1-58A0A0C4DH39 117 aa13.9□□□□□ -0.18
PARD6B-202ENST00000396039 PRR3P79522 188 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms