RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 TEX261Q6UWH6 196 aa9.02□□□□□ -0.97
CXCL12-205ENST00000395794 FAM231DQ6ZW35 169 aa9.02□□□□□ -0.97
CXCL12-205ENST00000395794 PGLYRP4Q96LB8 373 aa9.02□□□□□ -0.97
CXCL12-205ENST00000395794 SMIM7Q9BQ49 75 aa9.02□□□□□ -0.97
CXCL12-205ENST00000395794 PRR34Q9NV39 138 aa9.02□□□□□ -0.97
CXCL12-205ENST00000395794 AMTP48728 403 aa9.01□□□□□ -0.97
CXCL12-205ENST00000395794 GTSF1Q8WW33 167 aa9.01□□□□□ -0.97
CXCL12-205ENST00000395794 ZNF727A8MUV8 499 aa9□□□□□ -0.97
CXCL12-205ENST00000395794 USP17L23D6RBM5 183 aa9□□□□□ -0.97
CXCL12-205ENST00000395794 NDUFS6O75380 124 aaKnown RBP9□□□□□ -0.97
CXCL12-205ENST00000395794 REG3AQ06141 175 aa9□□□□□ -0.97
CXCL12-205ENST00000395794 LINC01620Q4KN68 170 aa9□□□□□ -0.97
CXCL12-205ENST00000395794 CT83Q5H943 113 aa9□□□□□ -0.97
CXCL12-205ENST00000395794 Q6ZSA8 131 aa9□□□□□ -0.97
CXCL12-205ENST00000395794 TRAV8-4A0A0B4J246 113 aa8.99□□□□□ -0.97
CXCL12-205ENST00000395794 A0A1B0GUV1 79 aa8.99□□□□□ -0.97
CXCL12-205ENST00000395794 GATD1Q8NB37 220 aa8.99□□□□□ -0.97
CXCL12-205ENST00000395794 FAM210AQ96ND0 272 aa8.99□□□□□ -0.97
CXCL12-205ENST00000395794 TRAV26-2A0A0B4J265 109 aa8.98□□□□□ -0.97
CXCL12-205ENST00000395794 PLA2G1BP04054 148 aaKnown RBP8.98□□□□□ -0.97
CXCL12-205ENST00000395794 DEFB104AQ8WTQ1 72 aa8.98□□□□□ -0.97
CXCL12-205ENST00000395794 IGLV10-54A0A075B6I4 117 aa8.97□□□□□ -0.97
CXCL12-205ENST00000395794 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.97□□□□□ -0.97
CXCL12-205ENST00000395794 AMMECR1LQ6DCA0 310 aa8.97□□□□□ -0.97
CXCL12-205ENST00000395794 DGAT2L7PQ6IED9 249 aa8.97□□□□□ -0.97
CXCL12-205ENST00000395794 LINC01551Q86U37 167 aa8.97□□□□□ -0.97
CXCL12-205ENST00000395794 C20orf203Q8NBC4 194 aa8.97□□□□□ -0.97
CXCL12-205ENST00000395794 KRTAP9-2Q9BYQ4 174 aa8.97□□□□□ -0.97
CXCL12-205ENST00000395794 IGLV4-60A0A075B6I1 120 aa8.96□□□□□ -0.98
CXCL12-205ENST00000395794 A0A1B0GUT8 65 aa8.96□□□□□ -0.98
CXCL12-205ENST00000395794 A0A1B0GVG6 124 aa8.96□□□□□ -0.98
CXCL12-205ENST00000395794 NCR2O95944 276 aa8.96□□□□□ -0.98
CXCL12-205ENST00000395794 SRP19P09132 144 aaKnown RBP8.96□□□□□ -0.98
CXCL12-205ENST00000395794 FOXA3P55318 350 aaPredicted RBP8.96□□□□□ -0.98
CXCL12-205ENST00000395794 CLRN3Q8NCR9 226 aa8.96□□□□□ -0.98
CXCL12-205ENST00000395794 TSKUQ8WUA8 353 aa8.96□□□□□ -0.98
CXCL12-205ENST00000395794 RPL39LQ96EH5 51 aaKnown RBP8.96□□□□□ -0.98
CXCL12-205ENST00000395794 CHAC1Q9BUX1 264 aa8.96□□□□□ -0.98
CXCL12-205ENST00000395794 GFRA4Q9GZZ7 299 aa8.96□□□□□ -0.98
CXCL12-205ENST00000395794 OSTCQ9NRP0 149 aa8.96□□□□□ -0.98
CXCL12-205ENST00000395794 VPS13BQ7Z7G8 4022 aa8.96□□□□□ -0.98
CXCL12-205ENST00000395794 FAM231BA6NCW3 169 aa8.95□□□□□ -0.98
CXCL12-205ENST00000395794 HIGD1CA8MV81 97 aa8.95□□□□□ -0.98
CXCL12-205ENST00000395794 APCSP02743 223 aa8.95□□□□□ -0.98
CXCL12-205ENST00000395794 PRSS1P07477 247 aa8.95□□□□□ -0.98
CXCL12-205ENST00000395794 PMCHP20382 165 aa8.95□□□□□ -0.98
CXCL12-205ENST00000395794 FAM74A3Q4VXF1 159 aa8.95□□□□□ -0.98
CXCL12-205ENST00000395794 SCXQ7RTU7 201 aa8.95□□□□□ -0.98
CXCL12-205ENST00000395794 FAT1Q14517 4588 aa8.95□□□□□ -0.98
CXCL12-205ENST00000395794 SDHAF1A6NFY7 115 aa8.94□□□□□ -0.98
CXCL12-205ENST00000395794 H7C423 109 aa8.94□□□□□ -0.98
CXCL12-205ENST00000395794 I3L3M4 83 aa8.94□□□□□ -0.98
CXCL12-205ENST00000395794 TMEM241Q24JQ0 296 aa8.94□□□□□ -0.98
CXCL12-205ENST00000395794 RNASEKQ6P5S7 137 aaKnown RBP8.94□□□□□ -0.98
CXCL12-205ENST00000395794 AP5S1Q9NUS5 200 aa8.94□□□□□ -0.98
CXCL12-205ENST00000395794 SRRM2Q9UQ35 2752 aaKnown RBP8.93□□□□□ -0.98
CXCL12-205ENST00000395794 hDV102S1A0JD36 115 aa8.93□□□□□ -0.98
CXCL12-205ENST00000395794 RIGQ13278 110 aa8.93□□□□□ -0.98
CXCL12-205ENST00000395794 PEA15Q15121 130 aa8.93□□□□□ -0.98
CXCL12-205ENST00000395794 KRTAP26-1Q6PEX3 210 aa8.93□□□□□ -0.98
CXCL12-205ENST00000395794 TMEM191AQ9H0A3 160 aa8.93□□□□□ -0.98
CXCL12-205ENST00000395794 ST20Q9HBF5 79 aa8.93□□□□□ -0.98
CXCL12-205ENST00000395794 DNAH8Q96JB1 4490 aa8.93□□□□□ -0.98
CXCL12-205ENST00000395794 IGKV3OR2-268A0A0C4DH90 116 aa8.92□□□□□ -0.98
CXCL12-205ENST00000395794 TMEM101Q96IK0 257 aa8.92□□□□□ -0.98
CXCL12-205ENST00000395794 BTF3L4Q96K17 158 aa8.92□□□□□ -0.98
CXCL12-205ENST00000395794 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.91□□□□□ -0.98
CXCL12-205ENST00000395794 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.91□□□□□ -0.98
CXCL12-205ENST00000395794 TRBV6-5A0A0K0K1A5 114 aa8.91□□□□□ -0.98
CXCL12-205ENST00000395794 KRTAP9-6A0A140TA67 174 aa8.91□□□□□ -0.98
CXCL12-205ENST00000395794 IGKV2-29A2NJV5 120 aaPredicted RBP8.91□□□□□ -0.98
CXCL12-205ENST00000395794 ADIRFQ15847 76 aa8.91□□□□□ -0.98
CXCL12-205ENST00000395794 CFAP161Q6P656 301 aa8.91□□□□□ -0.98
CXCL12-205ENST00000395794 C9orf163Q8N9P6 203 aa8.91□□□□□ -0.98
CXCL12-205ENST00000395794 CIRBP-AS1Q8TBR5 109 aa8.91□□□□□ -0.98
CXCL12-205ENST00000395794 MRAP2Q96G30 205 aa8.91□□□□□ -0.98
CXCL12-205ENST00000395794 GAGE12HA6NDE8 117 aa8.9□□□□□ -0.98
CXCL12-205ENST00000395794 PPP1R17O96001 155 aa8.9□□□□□ -0.98
CXCL12-205ENST00000395794 FGF6P10767 208 aa8.9□□□□□ -0.98
CXCL12-205ENST00000395794 ZNF25P17030 456 aaPredicted RBP8.9□□□□□ -0.98
CXCL12-205ENST00000395794 ISOC2Q96AB3 205 aa8.9□□□□□ -0.98
CXCL12-205ENST00000395794 SMDT1Q9H4I9 107 aa8.9□□□□□ -0.98
CXCL12-205ENST00000395794 NAT8Q9UHE5 227 aa8.9□□□□□ -0.98
CXCL12-205ENST00000395794 NAT8BQ9UHF3 227 aa8.9□□□□□ -0.98
CXCL12-205ENST00000395794 V9GYV3 84 aa8.9□□□□□ -0.98
CXCL12-205ENST00000395794 RAB4AP20338 218 aa8.89□□□□□ -0.99
CXCL12-205ENST00000395794 RPL23P62829 140 aaKnown RBP8.89□□□□□ -0.99
CXCL12-205ENST00000395794 AMN1Q8IY45 258 aa8.89□□□□□ -0.99
CXCL12-205ENST00000395794 NUP35Q8NFH5 326 aa8.89□□□□□ -0.99
CXCL12-205ENST00000395794 CNBPP62633 177 aaKnown RBP8.88□□□□□ -0.99
CXCL12-205ENST00000395794 OR5A1Q8NGJ0 315 aa8.88□□□□□ -0.99
CXCL12-205ENST00000395794 TMEM242Q9NWH2 141 aa8.88□□□□□ -0.99
CXCL12-205ENST00000395794 IGHV3-64A0A075B6Q5 118 aa8.87□□□□□ -0.99
CXCL12-205ENST00000395794 VCYO14598 125 aa8.87□□□□□ -0.99
CXCL12-205ENST00000395794 FCER1GP30273 86 aa8.87□□□□□ -0.99
CXCL12-205ENST00000395794 CHCHD10Q8WYQ3 142 aaPredicted RBP8.87□□□□□ -0.99
CXCL12-205ENST00000395794 DPH3Q96FX2 82 aa8.87□□□□□ -0.99
CXCL12-205ENST00000395794 RNF185Q96GF1 192 aa8.87□□□□□ -0.99
CXCL12-205ENST00000395794 TRBV27A0A0K0K1C4 114 aa8.86□□□□□ -0.99
CXCL12-205ENST00000395794 A0A1B0GW15 77 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms