RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 TIMM17AQ99595 171 aa14.34□□□□□ -0.11
RCCD1-201ENST00000394258 Q9UF83 564 aa14.34□□□□□ -0.11
RCCD1-201ENST00000394258 A0A1W2PRX2 142 aa14.33□□□□□ -0.12
RCCD1-201ENST00000394258 NIPBLQ6KC79 2804 aaeCLIP14.33□□□□□ -0.12
RCCD1-201ENST00000394258 Q6ZUT4 128 aa14.33□□□□□ -0.12
RCCD1-201ENST00000394258 KRTAP1-3Q8IUG1 177 aa14.33□□□□□ -0.12
RCCD1-201ENST00000394258 WFDC11Q8NEX6 87 aa14.33□□□□□ -0.12
RCCD1-201ENST00000394258 TSPAN13O95857 204 aa14.32□□□□□ -0.12
RCCD1-201ENST00000394258 PEMTQ9UBM1 199 aa14.32□□□□□ -0.12
RCCD1-201ENST00000394258 IGHV3-64A0A075B6Q5 118 aa14.32□□□□□ -0.12
RCCD1-201ENST00000394258 Q8N2B8 174 aa14.32□□□□□ -0.12
RCCD1-201ENST00000394258 JMJD1CQ15652 2540 aa14.32□□□□□ -0.12
RCCD1-201ENST00000394258 C4orf3Q8WVX3 66 aa14.31□□□□□ -0.12
RCCD1-201ENST00000394258 A0A0J9YY99 117 aa14.31□□□□□ -0.12
RCCD1-201ENST00000394258 I3L3M4 83 aa14.3□□□□□ -0.12
RCCD1-201ENST00000394258 HERVK_113P61574 105 aa14.3□□□□□ -0.12
RCCD1-201ENST00000394258 AKAP9Q99996 3911 aa14.3□□□□□ -0.12
RCCD1-201ENST00000394258 MAP6D1Q9H9H5 199 aa14.3□□□□□ -0.12
RCCD1-201ENST00000394258 LRRC75A-AS1Q8N1F1 130 aa14.29□□□□□ -0.12
RCCD1-201ENST00000394258 PAPPA-AS1Q5QFB9 102 aa14.29□□□□□ -0.12
RCCD1-201ENST00000394258 Q6ZSV7 163 aa14.29□□□□□ -0.12
RCCD1-201ENST00000394258 C20orf203Q8NBC4 194 aa14.29□□□□□ -0.12
RCCD1-201ENST00000394258 LINC01587Q99440 93 aa14.29□□□□□ -0.12
RCCD1-201ENST00000394258 SS18L2Q9UHA2 77 aa14.29□□□□□ -0.12
RCCD1-201ENST00000394258 NSUN5P1Q3KNT7 163 aa14.28□□□□□ -0.12
RCCD1-201ENST00000394258 TENM4Q6N022 2769 aa14.28□□□□□ -0.12
RCCD1-201ENST00000394258 TCL1BO95988 128 aa14.28□□□□□ -0.12
RCCD1-201ENST00000394258 DEFB114Q30KQ6 69 aa14.28□□□□□ -0.12
RCCD1-201ENST00000394258 CEMP1Q6PRD7 247 aaPredicted RBP14.28□□□□□ -0.12
RCCD1-201ENST00000394258 Q6ZSN1 163 aa14.28□□□□□ -0.12
RCCD1-201ENST00000394258 RHOHQ15669 191 aa14.28□□□□□ -0.12
RCCD1-201ENST00000394258 UBE2D1P51668 147 aa14.27□□□□□ -0.12
RCCD1-201ENST00000394258 AMELXQ99217 191 aa14.27□□□□□ -0.12
RCCD1-201ENST00000394258 C2CD3Q4AC94 2353 aa14.27□□□□□ -0.13
RCCD1-201ENST00000394258 RNASE13Q5GAN3 156 aaKnown RBP14.27□□□□□ -0.13
RCCD1-201ENST00000394258 IGHV3OR16-12A0A075B7B8 117 aa14.26□□□□□ -0.13
RCCD1-201ENST00000394258 A0A0J9YXV3 536 aa14.26□□□□□ -0.13
RCCD1-201ENST00000394258 J3QQQ9 107 aa14.26□□□□□ -0.13
RCCD1-201ENST00000394258 XCL2Q9UBD3 114 aa14.26□□□□□ -0.13
RCCD1-201ENST00000394258 M0R2P5 195 aa14.25□□□□□ -0.13
RCCD1-201ENST00000394258 DNAJC9-AS1A6NH13 148 aa14.25□□□□□ -0.13
RCCD1-201ENST00000394258 SCGB1C2P0DMR2 95 aa14.25□□□□□ -0.13
RCCD1-201ENST00000394258 CD28P10747 220 aa14.25□□□□□ -0.13
RCCD1-201ENST00000394258 VCX2Q9H322 139 aa14.25□□□□□ -0.13
RCCD1-201ENST00000394258 TNFRSF18Q9Y5U5 241 aa14.25□□□□□ -0.13
RCCD1-201ENST00000394258 IGLV4-3A0A075B6K6 122 aa14.24□□□□□ -0.13
RCCD1-201ENST00000394258 ITPR2Q14571 2701 aa14.24□□□□□ -0.13
RCCD1-201ENST00000394258 H7C2G1 150 aa14.24□□□□□ -0.13
RCCD1-201ENST00000394258 IGHV3-30P01768 117 aa14.24□□□□□ -0.13
RCCD1-201ENST00000394258 IGHV3-30-5P0DP03 117 aa14.24□□□□□ -0.13
RCCD1-201ENST00000394258 RAX2Q96IS3 184 aa14.24□□□□□ -0.13
RCCD1-201ENST00000394258 A6NJY4 79 aa14.23□□□□□ -0.13
RCCD1-201ENST00000394258 LGALS3P17931 250 aaKnown RBP14.23□□□□□ -0.13
RCCD1-201ENST00000394258 ANAPC13Q9BS18 74 aa14.23□□□□□ -0.13
RCCD1-201ENST00000394258 IGHV3-38A0A0C4DH36 116 aa14.23□□□□□ -0.13
RCCD1-201ENST00000394258 ZNF22P17026 224 aaPredicted RBP14.23□□□□□ -0.13
RCCD1-201ENST00000394258 ZNF415Q09FC8 603 aa14.23□□□□□ -0.13
RCCD1-201ENST00000394258 SLC25A29Q8N8R3 303 aa14.23□□□□□ -0.13
RCCD1-201ENST00000394258 PPDPFLQ8WWR9 84 aa14.23□□□□□ -0.13
RCCD1-201ENST00000394258 TMEM223A0PJW6 202 aa14.22□□□□□ -0.13
RCCD1-201ENST00000394258 TEN1Q86WV5 123 aa14.22□□□□□ -0.13
RCCD1-201ENST00000394258 NDUFA11Q86Y39 141 aa14.22□□□□□ -0.13
RCCD1-201ENST00000394258 ANKRD29Q8N6D5 301 aa14.22□□□□□ -0.13
RCCD1-201ENST00000394258 FAM104AQ969W3 186 aa14.22□□□□□ -0.13
RCCD1-201ENST00000394258 ESM1Q9NQ30 184 aa14.22□□□□□ -0.13
RCCD1-201ENST00000394258 A8MTW9 85 aa14.22□□□□□ -0.13
RCCD1-201ENST00000394258 CFC1BP0CG36 223 aa14.22□□□□□ -0.13
RCCD1-201ENST00000394258 CFC1P0CG37 223 aa14.22□□□□□ -0.13
RCCD1-201ENST00000394258 ATP6V0E2Q8NHE4 81 aa14.22□□□□□ -0.13
RCCD1-201ENST00000394258 A8MWV9 139 aa14.21□□□□□ -0.13
RCCD1-201ENST00000394258 UBE2D3P61077 147 aa14.21□□□□□ -0.13
RCCD1-201ENST00000394258 UBE2D2P62837 147 aa14.21□□□□□ -0.13
RCCD1-201ENST00000394258 ERG28Q9UKR5 140 aa14.21□□□□□ -0.13
RCCD1-201ENST00000394258 ADARB2-AS1A8MUL3 147 aa14.2□□□□□ -0.14
RCCD1-201ENST00000394258 B5MCH6 92 aa14.2□□□□□ -0.14
RCCD1-201ENST00000394258 RHODO00212 210 aa14.2□□□□□ -0.14
RCCD1-201ENST00000394258 ODF3L2Q3SX64 289 aa14.2□□□□□ -0.14
RCCD1-201ENST00000394258 C11orf72Q8NBR9 251 aa14.2□□□□□ -0.14
RCCD1-201ENST00000394258 SPXQ9BT56 116 aa14.2□□□□□ -0.14
RCCD1-201ENST00000394258 TRAV2A0A0B4J234 112 aa14.19□□□□□ -0.14
RCCD1-201ENST00000394258 INSP01308 110 aa14.19□□□□□ -0.14
RCCD1-201ENST00000394258 SETXQ7Z333 2677 aaKnown RBP14.18□□□□□ -0.14
RCCD1-201ENST00000394258 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.18□□□□□ -0.14
RCCD1-201ENST00000394258 IGKV2-29A2NJV5 120 aaPredicted RBP14.18□□□□□ -0.14
RCCD1-201ENST00000394258 LEPROTO15243 131 aa14.18□□□□□ -0.14
RCCD1-201ENST00000394258 TRBV20-1A0A075B6N2 111 aa14.18□□□□□ -0.14
RCCD1-201ENST00000394258 CCL24O00175 119 aa14.18□□□□□ -0.14
RCCD1-201ENST00000394258 EIF4EBP3O60516 100 aaPredicted RBP14.18□□□□□ -0.14
RCCD1-201ENST00000394258 STHQ8IWL8 128 aa14.17□□□□□ -0.14
RCCD1-201ENST00000394258 TRAV8-3A0A0A6YYJ7 113 aa14.17□□□□□ -0.14
RCCD1-201ENST00000394258 CITED2Q99967 270 aaPredicted RBP14.17□□□□□ -0.14
RCCD1-201ENST00000394258 C9JAW5 83 aa14.16□□□□□ -0.14
RCCD1-201ENST00000394258 C10orf126Q8N4M7 172 aa14.16□□□□□ -0.14
RCCD1-201ENST00000394258 A4D1N5 150 aa14.16□□□□□ -0.14
RCCD1-201ENST00000394258 ZFAND6Q6FIF0 208 aa14.16□□□□□ -0.14
RCCD1-201ENST00000394258 TEX29Q8N6K0 151 aa14.16□□□□□ -0.14
RCCD1-201ENST00000394258 TMEM86BQ8N661 226 aa14.15□□□□□ -0.14
RCCD1-201ENST00000394258 HELZ2Q9BYK8 2649 aaKnown RBP14.15□□□□□ -0.14
RCCD1-201ENST00000394258 A8MZ25 164 aa14.15□□□□□ -0.14
RCCD1-201ENST00000394258 CFAP161Q6P656 301 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms