RNA–Protein interactions for RNA: ENST00000393747.3

CTTN-204, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-204ENST00000393747 PKHD1L1Q86WI1 4243 aa11.58□□□□□ -0.56
CTTN-204ENST00000393747 A0A1B0GUV1 79 aa11.58□□□□□ -0.56
CTTN-204ENST00000393747 DGAT2L7PQ6IED9 249 aa11.58□□□□□ -0.56
CTTN-204ENST00000393747 WDR73Q6P4I2 378 aa11.58□□□□□ -0.56
CTTN-204ENST00000393747 BIN3Q9NQY0 253 aa11.58□□□□□ -0.56
CTTN-204ENST00000393747 OCC1Q8TAD7 63 aa11.57□□□□□ -0.56
CTTN-204ENST00000393747 GTSF1Q8WW33 167 aa11.57□□□□□ -0.56
CTTN-204ENST00000393747 RPP21Q9H633 154 aaKnown RBP11.57□□□□□ -0.56
CTTN-204ENST00000393747 TRAV26-2A0A0B4J265 109 aa11.56□□□□□ -0.56
CTTN-204ENST00000393747 SDIM1Q6ZPB5 146 aa11.56□□□□□ -0.56
CTTN-204ENST00000393747 GATD1Q8NB37 220 aa11.56□□□□□ -0.56
CTTN-204ENST00000393747 TAGLN2P37802 199 aaKnown RBP11.55□□□□□ -0.56
CTTN-204ENST00000393747 FOXA3P55318 350 aaPredicted RBP11.55□□□□□ -0.56
CTTN-204ENST00000393747 TWIST1Q15672 202 aa11.55□□□□□ -0.56
CTTN-204ENST00000393747 Q6ZNX1 250 aa11.55□□□□□ -0.56
CTTN-204ENST00000393747 SLPIP03973 132 aa11.54□□□□□ -0.56
CTTN-204ENST00000393747 CNBPP62633 177 aaKnown RBP11.54□□□□□ -0.56
CTTN-204ENST00000393747 TRAV8-4A0A0B4J246 113 aa11.53□□□□□ -0.56
CTTN-204ENST00000393747 AMTP48728 403 aa11.53□□□□□ -0.56
CTTN-204ENST00000393747 HNRNPA3P51991 378 aaKnown RBP11.53□□□□□ -0.56
CTTN-204ENST00000393747 COTL1Q14019 142 aa11.53□□□□□ -0.56
CTTN-204ENST00000393747 CLRN3Q8NCR9 226 aa11.53□□□□□ -0.56
CTTN-204ENST00000393747 RPL39LQ96EH5 51 aaKnown RBP11.53□□□□□ -0.56
CTTN-204ENST00000393747 CIRBPQ14011 172 aaKnown RBP11.51□□□□□ -0.57
CTTN-204ENST00000393747 ALKAL2Q6UX46 152 aa11.51□□□□□ -0.57
CTTN-204ENST00000393747 LYPD6BQ8NI32 183 aa11.51□□□□□ -0.57
CTTN-204ENST00000393747 hDV102S1A0JD36 115 aa11.5□□□□□ -0.57
CTTN-204ENST00000393747 TMEM250H0YL14 139 aa11.5□□□□□ -0.57
CTTN-204ENST00000393747 RPL37AP61513 92 aaKnown RBP11.5□□□□□ -0.57
CTTN-204ENST00000393747 UBE2L6O14933 153 aa11.49□□□□□ -0.57
CTTN-204ENST00000393747 FAM231DQ6ZW35 169 aa11.48□□□□□ -0.57
CTTN-204ENST00000393747 AKAP14Q86UN6 197 aa11.48□□□□□ -0.57
CTTN-204ENST00000393747 C15orf56Q8N910 161 aa11.48□□□□□ -0.57
CTTN-204ENST00000393747 GAS8-AS1O95177 125 aa11.47□□□□□ -0.57
CTTN-204ENST00000393747 OXTP01178 125 aa11.47□□□□□ -0.57
CTTN-204ENST00000393747 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.46□□□□□ -0.57
CTTN-204ENST00000393747 IGKV2-29A2NJV5 120 aaPredicted RBP11.46□□□□□ -0.57
CTTN-204ENST00000393747 GAGE12HA6NDE8 117 aa11.46□□□□□ -0.57
CTTN-204ENST00000393747 GATCO43716 136 aaKnown RBP11.46□□□□□ -0.57
CTTN-204ENST00000393747 CHTF8P0CG12 524 aa11.46□□□□□ -0.57
CTTN-204ENST00000393747 BLOC1S1P78537 153 aa11.46□□□□□ -0.57
CTTN-204ENST00000393747 hCG_2014768A0A024R1R8 64 aa11.45□□□□□ -0.58
CTTN-204ENST00000393747 IGKV3OR2-268A0A0C4DH90 116 aa11.45□□□□□ -0.58
CTTN-204ENST00000393747 SDHAF1A6NFY7 115 aa11.45□□□□□ -0.58
CTTN-204ENST00000393747 NCR2O95944 276 aa11.45□□□□□ -0.58
CTTN-204ENST00000393747 IGHV3-64A0A075B6Q5 118 aa11.44□□□□□ -0.58
CTTN-204ENST00000393747 FAM231BA6NCW3 169 aa11.44□□□□□ -0.58
CTTN-204ENST00000393747 CT83Q5H943 113 aa11.44□□□□□ -0.58
CTTN-204ENST00000393747 TRBV6-5A0A0K0K1A5 114 aa11.43□□□□□ -0.58
CTTN-204ENST00000393747 A8MWL6 223 aa11.43□□□□□ -0.58
CTTN-204ENST00000393747 FGF6P10767 208 aa11.43□□□□□ -0.58
CTTN-204ENST00000393747 CEBPGP53567 150 aa11.43□□□□□ -0.58
CTTN-204ENST00000393747 LINC01551Q86U37 167 aa11.43□□□□□ -0.58
CTTN-204ENST00000393747 SPACA4Q8TDM5 124 aa11.43□□□□□ -0.58
CTTN-204ENST00000393747 CHCHD10Q8WYQ3 142 aaPredicted RBP11.43□□□□□ -0.58
CTTN-204ENST00000393747 AP5S1Q9NUS5 200 aa11.43□□□□□ -0.58
CTTN-204ENST00000393747 APCSP02743 223 aa11.42□□□□□ -0.58
CTTN-204ENST00000393747 HIGD2BQ4VC39 106 aa11.42□□□□□ -0.58
CTTN-204ENST00000393747 TEX261Q6UWH6 196 aa11.42□□□□□ -0.58
CTTN-204ENST00000393747 SMIM15Q7Z3B0 74 aa11.42□□□□□ -0.58
CTTN-204ENST00000393747 A0A087WYN8 130 aa11.41□□□□□ -0.58
CTTN-204ENST00000393747 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.41□□□□□ -0.58
CTTN-204ENST00000393747 H7C423 109 aa11.41□□□□□ -0.58
CTTN-204ENST00000393747 AMMECR1LQ6DCA0 310 aa11.41□□□□□ -0.58
CTTN-204ENST00000393747 RNASEKQ6P5S7 137 aaKnown RBP11.41□□□□□ -0.58
CTTN-204ENST00000393747 RNF185Q96GF1 192 aa11.41□□□□□ -0.58
CTTN-204ENST00000393747 TSHBP01222 138 aa11.4□□□□□ -0.58
CTTN-204ENST00000393747 ESDP10768 282 aa11.4□□□□□ -0.58
CTTN-204ENST00000393747 RPS10P46783 165 aaKnown RBP11.4□□□□□ -0.58
CTTN-204ENST00000393747 FOXI1Q12951 378 aa11.4□□□□□ -0.58
CTTN-204ENST00000393747 TSKUQ8WUA8 353 aa11.4□□□□□ -0.58
CTTN-204ENST00000393747 SMIM7Q9BQ49 75 aa11.4□□□□□ -0.58
CTTN-204ENST00000393747 HIGD1CA8MV81 97 aa11.39□□□□□ -0.59
CTTN-204ENST00000393747 I3L3M4 83 aa11.39□□□□□ -0.59
CTTN-204ENST00000393747 GVQW2A0A096LPI5 108 aaPredicted RBP11.38□□□□□ -0.59
CTTN-204ENST00000393747 NDUFS6O75380 124 aaKnown RBP11.38□□□□□ -0.59
CTTN-204ENST00000393747 CFAP161Q6P656 301 aa11.38□□□□□ -0.59
CTTN-204ENST00000393747 FAM210AQ96ND0 272 aa11.38□□□□□ -0.59
CTTN-204ENST00000393747 EIF5A2Q9GZV4 153 aaKnown RBP11.38□□□□□ -0.59
CTTN-204ENST00000393747 TMEM191AQ9H0A3 160 aa11.38□□□□□ -0.59
CTTN-204ENST00000393747 TMEM242Q9NWH2 141 aa11.38□□□□□ -0.59
CTTN-204ENST00000393747 A0A1B0GUT8 65 aa11.37□□□□□ -0.59
CTTN-204ENST00000393747 SRP19P09132 144 aaKnown RBP11.37□□□□□ -0.59
CTTN-204ENST00000393747 ZNF25P17030 456 aaPredicted RBP11.37□□□□□ -0.59
CTTN-204ENST00000393747 PMCHP20382 165 aa11.37□□□□□ -0.59
CTTN-204ENST00000393747 POLR2KP53803 58 aaKnown RBP11.37□□□□□ -0.59
CTTN-204ENST00000393747 COX6A2Q02221 97 aa11.37□□□□□ -0.59
CTTN-204ENST00000393747 SERTAD4-AS1Q5TG53 156 aa11.37□□□□□ -0.59
CTTN-204ENST00000393747 OR5A1Q8NGJ0 315 aa11.37□□□□□ -0.59
CTTN-204ENST00000393747 PRSS3P2Q8NHM4 247 aa11.37□□□□□ -0.59
CTTN-204ENST00000393747 OSTCQ9NRP0 149 aa11.37□□□□□ -0.59
CTTN-204ENST00000393747 PLAC8Q9NZF1 115 aa11.37□□□□□ -0.59
CTTN-204ENST00000393747 UBR4Q5T4S7 5183 aa11.37□□□□□ -0.59
CTTN-204ENST00000393747 MT1HL1P0DM35 61 aa11.36□□□□□ -0.59
CTTN-204ENST00000393747 RAB4AP20338 218 aa11.36□□□□□ -0.59
CTTN-204ENST00000393747 AMN1Q8IY45 258 aa11.36□□□□□ -0.59
CTTN-204ENST00000393747 ST20Q9HBF5 79 aa11.36□□□□□ -0.59
CTTN-204ENST00000393747 V9GYV3 84 aa11.36□□□□□ -0.59
CTTN-204ENST00000393747 TRBV27A0A0K0K1C4 114 aa11.35□□□□□ -0.59
CTTN-204ENST00000393747 ZNF727A8MUV8 499 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms