RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 IFNA1P01562 189 aa11.75□□□□□ -0.53
PDLIM7-205ENST00000393551 REG3AQ06141 175 aa11.75□□□□□ -0.53
PDLIM7-205ENST00000393551 RASL11AQ6T310 242 aa11.75□□□□□ -0.53
PDLIM7-205ENST00000393551 C9orf163Q8N9P6 203 aa11.75□□□□□ -0.53
PDLIM7-205ENST00000393551 IGLV10-54A0A075B6I4 117 aa11.74□□□□□ -0.53
PDLIM7-205ENST00000393551 CTRLP40313 264 aa11.74□□□□□ -0.53
PDLIM7-205ENST00000393551 DGAT2L7PQ6IED9 249 aa11.74□□□□□ -0.53
PDLIM7-205ENST00000393551 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.74□□□□□ -0.53
PDLIM7-205ENST00000393551 A0A1B0GUV1 79 aa11.73□□□□□ -0.53
PDLIM7-205ENST00000393551 XKRY2A2RUG3 117 aa11.73□□□□□ -0.53
PDLIM7-205ENST00000393551 K7EN84 100 aa11.73□□□□□ -0.53
PDLIM7-205ENST00000393551 COMMD7Q86VX2 200 aa11.73□□□□□ -0.53
PDLIM7-205ENST00000393551 CNFNQ9BYD5 112 aa11.73□□□□□ -0.53
PDLIM7-205ENST00000393551 DPH3P1Q9H4G8 78 aa11.73□□□□□ -0.53
PDLIM7-205ENST00000393551 NIT2Q9NQR4 276 aa11.73□□□□□ -0.53
PDLIM7-205ENST00000393551 HMCN2Q8NDA2 5059 aa11.73□□□□□ -0.53
PDLIM7-205ENST00000393551 TRGC1P0CF51 173 aa11.72□□□□□ -0.53
PDLIM7-205ENST00000393551 PEA15Q15121 130 aa11.72□□□□□ -0.53
PDLIM7-205ENST00000393551 WDR73Q6P4I2 378 aa11.72□□□□□ -0.53
PDLIM7-205ENST00000393551 OCC1Q8TAD7 63 aa11.72□□□□□ -0.53
PDLIM7-205ENST00000393551 PGLYRP4Q96LB8 373 aa11.72□□□□□ -0.53
PDLIM7-205ENST00000393551 FAM210AQ96ND0 272 aa11.72□□□□□ -0.53
PDLIM7-205ENST00000393551 TMEM243Q9BU79 118 aa11.72□□□□□ -0.53
PDLIM7-205ENST00000393551 RNASE7Q9H1E1 156 aaKnown RBP11.72□□□□□ -0.53
PDLIM7-205ENST00000393551 SDIM1Q6ZPB5 146 aa11.71□□□□□ -0.53
PDLIM7-205ENST00000393551 SLPIP03973 132 aa11.7□□□□□ -0.54
PDLIM7-205ENST00000393551 HNRNPA3P51991 378 aaKnown RBP11.7□□□□□ -0.54
PDLIM7-205ENST00000393551 GATD1Q8NB37 220 aa11.7□□□□□ -0.54
PDLIM7-205ENST00000393551 GTSF1Q8WW33 167 aa11.7□□□□□ -0.54
PDLIM7-205ENST00000393551 BIN3Q9NQY0 253 aa11.7□□□□□ -0.54
PDLIM7-205ENST00000393551 TRAV26-2A0A0B4J265 109 aa11.69□□□□□ -0.54
PDLIM7-205ENST00000393551 TWIST1Q15672 202 aa11.69□□□□□ -0.54
PDLIM7-205ENST00000393551 RPP21Q9H633 154 aaKnown RBP11.69□□□□□ -0.54
PDLIM7-205ENST00000393551 TRAV8-4A0A0B4J246 113 aa11.68□□□□□ -0.54
PDLIM7-205ENST00000393551 S100A1P23297 94 aa11.68□□□□□ -0.54
PDLIM7-205ENST00000393551 FOXA3P55318 350 aaPredicted RBP11.68□□□□□ -0.54
PDLIM7-205ENST00000393551 CNBPP62633 177 aaKnown RBP11.68□□□□□ -0.54
PDLIM7-205ENST00000393551 SLC7A5P1Q8MH63 180 aa11.68□□□□□ -0.54
PDLIM7-205ENST00000393551 CLRN3Q8NCR9 226 aa11.68□□□□□ -0.54
PDLIM7-205ENST00000393551 EIF5A2Q9GZV4 153 aaKnown RBP11.67□□□□□ -0.54
PDLIM7-205ENST00000393551 AMTP48728 403 aa11.66□□□□□ -0.54
PDLIM7-205ENST00000393551 RPL37AP61513 92 aaKnown RBP11.66□□□□□ -0.54
PDLIM7-205ENST00000393551 CIRBPQ14011 172 aaKnown RBP11.66□□□□□ -0.54
PDLIM7-205ENST00000393551 COTL1Q14019 142 aa11.66□□□□□ -0.54
PDLIM7-205ENST00000393551 RPL39LQ96EH5 51 aaKnown RBP11.66□□□□□ -0.54
PDLIM7-205ENST00000393551 hDV102S1A0JD36 115 aa11.65□□□□□ -0.54
PDLIM7-205ENST00000393551 OXTP01178 125 aa11.64□□□□□ -0.55
PDLIM7-205ENST00000393551 UBE2L6O14933 153 aa11.63□□□□□ -0.55
PDLIM7-205ENST00000393551 ATP6V1G1O75348 118 aa11.63□□□□□ -0.55
PDLIM7-205ENST00000393551 C15orf56Q8N910 161 aa11.63□□□□□ -0.55
PDLIM7-205ENST00000393551 TMEM250H0YL14 139 aa11.62□□□□□ -0.55
PDLIM7-205ENST00000393551 TMEM218A2RU14 115 aa11.61□□□□□ -0.55
PDLIM7-205ENST00000393551 GAS8-AS1O95177 125 aa11.61□□□□□ -0.55
PDLIM7-205ENST00000393551 CHTF8P0CG12 524 aa11.61□□□□□ -0.55
PDLIM7-205ENST00000393551 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.6□□□□□ -0.55
PDLIM7-205ENST00000393551 IGKV2-29A2NJV5 120 aaPredicted RBP11.6□□□□□ -0.55
PDLIM7-205ENST00000393551 GAGE12HA6NDE8 117 aa11.6□□□□□ -0.55
PDLIM7-205ENST00000393551 FAM231DQ6ZW35 169 aa11.6□□□□□ -0.55
PDLIM7-205ENST00000393551 SEC11CQ9BY50 192 aa11.6□□□□□ -0.55
PDLIM7-205ENST00000393551 IGKV3OR2-268A0A0C4DH90 116 aa11.59□□□□□ -0.55
PDLIM7-205ENST00000393551 FAM231BA6NCW3 169 aa11.59□□□□□ -0.55
PDLIM7-205ENST00000393551 SDHAF1A6NFY7 115 aa11.59□□□□□ -0.55
PDLIM7-205ENST00000393551 GATCO43716 136 aaKnown RBP11.59□□□□□ -0.55
PDLIM7-205ENST00000393551 SRP19P09132 144 aaKnown RBP11.59□□□□□ -0.55
PDLIM7-205ENST00000393551 FAM74A3Q4VXF1 159 aa11.59□□□□□ -0.55
PDLIM7-205ENST00000393551 UBR4Q5T4S7 5183 aa11.59□□□□□ -0.55
PDLIM7-205ENST00000393551 IGHV3-64A0A075B6Q5 118 aa11.58□□□□□ -0.56
PDLIM7-205ENST00000393551 NCR2O95944 276 aa11.58□□□□□ -0.56
PDLIM7-205ENST00000393551 SRSF3P84103 164 aaKnown RBP11.58□□□□□ -0.56
PDLIM7-205ENST00000393551 C10orf91Q5T1B1 145 aa11.58□□□□□ -0.56
PDLIM7-205ENST00000393551 AP5S1Q9NUS5 200 aa11.58□□□□□ -0.56
PDLIM7-205ENST00000393551 TNXBP22105 4242 aa11.57□□□□□ -0.56
PDLIM7-205ENST00000393551 A0A087WYN8 130 aa11.57□□□□□ -0.56
PDLIM7-205ENST00000393551 A8MWL6 223 aa11.57□□□□□ -0.56
PDLIM7-205ENST00000393551 FGF6P10767 208 aa11.57□□□□□ -0.56
PDLIM7-205ENST00000393551 SPACA4Q8TDM5 124 aa11.57□□□□□ -0.56
PDLIM7-205ENST00000393551 CHCHD10Q8WYQ3 142 aaPredicted RBP11.57□□□□□ -0.56
PDLIM7-205ENST00000393551 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.56□□□□□ -0.56
PDLIM7-205ENST00000393551 APCSP02743 223 aa11.56□□□□□ -0.56
PDLIM7-205ENST00000393551 HIGD2BQ4VC39 106 aa11.56□□□□□ -0.56
PDLIM7-205ENST00000393551 SERTAD4-AS1Q5TG53 156 aa11.56□□□□□ -0.56
PDLIM7-205ENST00000393551 SMIM15Q7Z3B0 74 aa11.56□□□□□ -0.56
PDLIM7-205ENST00000393551 CARHSP1Q9Y2V2 147 aaKnown RBP11.56□□□□□ -0.56
PDLIM7-205ENST00000393551 TRBV6-5A0A0K0K1A5 114 aa11.55□□□□□ -0.56
PDLIM7-205ENST00000393551 C9JQL5 133 aa11.55□□□□□ -0.56
PDLIM7-205ENST00000393551 F8W036 122 aa11.55□□□□□ -0.56
PDLIM7-205ENST00000393551 H7C423 109 aa11.55□□□□□ -0.56
PDLIM7-205ENST00000393551 CEBPGP53567 150 aa11.55□□□□□ -0.56
PDLIM7-205ENST00000393551 CT83Q5H943 113 aa11.55□□□□□ -0.56
PDLIM7-205ENST00000393551 AMMECR1LQ6DCA0 310 aa11.55□□□□□ -0.56
PDLIM7-205ENST00000393551 RNASEKQ6P5S7 137 aaKnown RBP11.55□□□□□ -0.56
PDLIM7-205ENST00000393551 I3L3M4 83 aa11.54□□□□□ -0.56
PDLIM7-205ENST00000393551 TSHBP01222 138 aa11.54□□□□□ -0.56
PDLIM7-205ENST00000393551 MT1HL1P0DM35 61 aa11.54□□□□□ -0.56
PDLIM7-205ENST00000393551 ESDP10768 282 aa11.54□□□□□ -0.56
PDLIM7-205ENST00000393551 COX6A2Q02221 97 aa11.54□□□□□ -0.56
PDLIM7-205ENST00000393551 FOXI1Q12951 378 aa11.54□□□□□ -0.56
PDLIM7-205ENST00000393551 LINC01551Q86U37 167 aa11.54□□□□□ -0.56
PDLIM7-205ENST00000393551 RNF185Q96GF1 192 aa11.54□□□□□ -0.56
PDLIM7-205ENST00000393551 RPS10P46783 165 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms