RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 BUB1B-PAK6H3BSN5 160 aa11.21□□□□□ -0.62
VLDLR-202ENST00000382099 INAFM2P0DMQ5 153 aa11.21□□□□□ -0.62
VLDLR-202ENST00000382099 SUMO4Q6EEV6 95 aa11.2□□□□□ -0.62
VLDLR-202ENST00000382099 C20orf197Q8N268 126 aa11.2□□□□□ -0.62
VLDLR-202ENST00000382099 BRK1Q8WUW1 75 aa11.2□□□□□ -0.62
VLDLR-202ENST00000382099 IGKV3-7A0A075B6H7 116 aa11.2□□□□□ -0.62
VLDLR-202ENST00000382099 CTSGP08311 255 aa11.2□□□□□ -0.62
VLDLR-202ENST00000382099 F8W735 103 aaPredicted RBP11.19□□□□□ -0.62
VLDLR-202ENST00000382099 RPL11P62913 178 aaKnown RBP11.19□□□□□ -0.62
VLDLR-202ENST00000382099 UPK3BQ9BT76 320 aa11.19□□□□□ -0.62
VLDLR-202ENST00000382099 TRAV21A0A0B4J279 112 aa11.19□□□□□ -0.62
VLDLR-202ENST00000382099 LITAFQ99732 161 aa11.19□□□□□ -0.62
VLDLR-202ENST00000382099 DKK4Q9UBT3 224 aa11.18□□□□□ -0.62
VLDLR-202ENST00000382099 FAM223BA6NKX1 122 aa11.18□□□□□ -0.62
VLDLR-202ENST00000382099 COX7A2LO14548 114 aa11.18□□□□□ -0.62
VLDLR-202ENST00000382099 C14orf132Q9NPU4 83 aa11.18□□□□□ -0.62
VLDLR-202ENST00000382099 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.18□□□□□ -0.62
VLDLR-202ENST00000382099 ZFYVE26Q68DK2 2539 aa11.17□□□□□ -0.62
VLDLR-202ENST00000382099 NBR2O15453 112 aa11.17□□□□□ -0.62
VLDLR-202ENST00000382099 CD28P10747 220 aa11.17□□□□□ -0.62
VLDLR-202ENST00000382099 POLR2KP53803 58 aaKnown RBP11.17□□□□□ -0.62
VLDLR-202ENST00000382099 IGLV11-55A0A075B6I3 123 aa11.17□□□□□ -0.62
VLDLR-202ENST00000382099 IGLV3-9A0A075B6K5 115 aa11.17□□□□□ -0.62
VLDLR-202ENST00000382099 BUB3O43684 328 aa11.17□□□□□ -0.62
VLDLR-202ENST00000382099 CACNA1AO00555 2505 aa11.17□□□□□ -0.62
VLDLR-202ENST00000382099 DOPEY2Q9Y3R5 2298 aa11.17□□□□□ -0.62
VLDLR-202ENST00000382099 ZFHX3Q15911 3703 aa11.16□□□□□ -0.62
VLDLR-202ENST00000382099 A0A0J9YX75 114 aa11.16□□□□□ -0.62
VLDLR-202ENST00000382099 CLPSL1A2RUU4 121 aa11.16□□□□□ -0.62
VLDLR-202ENST00000382099 VMO1Q7Z5L0 202 aa11.16□□□□□ -0.62
VLDLR-202ENST00000382099 TRAV23DV6A0A075B6W5 121 aa11.16□□□□□ -0.62
VLDLR-202ENST00000382099 GHRHP01286 108 aa11.16□□□□□ -0.62
VLDLR-202ENST00000382099 C1orf195Q5TG92 126 aa11.16□□□□□ -0.62
VLDLR-202ENST00000382099 TMEM86BQ8N661 226 aa11.15□□□□□ -0.62
VLDLR-202ENST00000382099 LYNX1G3V0Z9 82 aa11.15□□□□□ -0.62
VLDLR-202ENST00000382099 LYNX1P0DP58 116 aa11.15□□□□□ -0.62
VLDLR-202ENST00000382099 C9orf139Q6ZV77 190 aa11.15□□□□□ -0.62
VLDLR-202ENST00000382099 C9orf85Q96MD7 179 aa11.15□□□□□ -0.62
VLDLR-202ENST00000382099 IGHV3OR16-10A0A075B7F0 116 aa11.14□□□□□ -0.63
VLDLR-202ENST00000382099 C9orf47Q6ZRZ4 202 aa11.14□□□□□ -0.63
VLDLR-202ENST00000382099 WFDC9Q8NEX5 89 aa11.14□□□□□ -0.63
VLDLR-202ENST00000382099 PRORYQ9H606 182 aa11.14□□□□□ -0.63
VLDLR-202ENST00000382099 RBMY1BA6NDE4 496 aaKnown RBP11.14□□□□□ -0.63
VLDLR-202ENST00000382099 RBMY1EA6NEQ0 496 aaKnown RBP11.14□□□□□ -0.63
VLDLR-202ENST00000382099 RBMY1DP0C7P1 496 aaKnown RBP11.14□□□□□ -0.63
VLDLR-202ENST00000382099 RBMY1A1P0DJD3 496 aaKnown RBP11.14□□□□□ -0.63
VLDLR-202ENST00000382099 RBMY1CP0DJD4 496 aa11.14□□□□□ -0.63
VLDLR-202ENST00000382099 HILS1P60008 231 aa11.14□□□□□ -0.63
VLDLR-202ENST00000382099 RBMY1FQ15415 496 aaKnown RBP11.14□□□□□ -0.63
VLDLR-202ENST00000382099 PRIMA1Q86XR5 153 aa11.14□□□□□ -0.63
VLDLR-202ENST00000382099 SEM1Q6ZVN7 128 aa11.14□□□□□ -0.63
VLDLR-202ENST00000382099 LINC01561Q8N1V8 128 aa11.14□□□□□ -0.63
VLDLR-202ENST00000382099 CREBBPQ92793 2442 aa11.14□□□□□ -0.63
VLDLR-202ENST00000382099 CLEC19AQ6UXS0 136 aa11.13□□□□□ -0.63
VLDLR-202ENST00000382099 Q8N2B8 174 aa11.13□□□□□ -0.63
VLDLR-202ENST00000382099 ZFAND3Q9H8U3 227 aa11.13□□□□□ -0.63
VLDLR-202ENST00000382099 POLQO75417 2590 aa11.13□□□□□ -0.63
VLDLR-202ENST00000382099 ECSCRQ19T08 205 aa11.13□□□□□ -0.63
VLDLR-202ENST00000382099 LINC00846Q9NV44 126 aa11.13□□□□□ -0.63
VLDLR-202ENST00000382099 F6UB75 175 aa11.13□□□□□ -0.63
VLDLR-202ENST00000382099 TMEM178BH3BS89 294 aa11.13□□□□□ -0.63
VLDLR-202ENST00000382099 VPS13CQ709C8 3753 aa11.12□□□□□ -0.63
VLDLR-202ENST00000382099 CSMD2Q7Z408 3487 aa11.12□□□□□ -0.63
VLDLR-202ENST00000382099 IGLV4-3A0A075B6K6 122 aa11.12□□□□□ -0.63
VLDLR-202ENST00000382099 IGHV1-58A0A0C4DH39 117 aa11.12□□□□□ -0.63
VLDLR-202ENST00000382099 C15orf32Q32M92 178 aa11.12□□□□□ -0.63
VLDLR-202ENST00000382099 NOTCH3Q9UM47 2321 aa11.12□□□□□ -0.63
VLDLR-202ENST00000382099 LY6HO94772 140 aa11.12□□□□□ -0.63
VLDLR-202ENST00000382099 IGLV1-47P01700 117 aa11.12□□□□□ -0.63
VLDLR-202ENST00000382099 IGHV1-69P01742 117 aa11.12□□□□□ -0.63
VLDLR-202ENST00000382099 RNASE3P12724 160 aaKnown RBP11.12□□□□□ -0.63
VLDLR-202ENST00000382099 CRYBG3Q68DQ2 2970 aa11.12□□□□□ -0.63
VLDLR-202ENST00000382099 SETD2Q9BYW2 2564 aaPredicted RBP11.11□□□□□ -0.63
VLDLR-202ENST00000382099 K7ENP7 123 aa11.11□□□□□ -0.63
VLDLR-202ENST00000382099 NDUFC2O95298 119 aa11.11□□□□□ -0.63
VLDLR-202ENST00000382099 TRAV12-2A0A075B6T6 113 aa11.1□□□□□ -0.63
VLDLR-202ENST00000382099 FAM218AQ96MZ4 157 aa11.1□□□□□ -0.63
VLDLR-202ENST00000382099 ZFAND2AQ8N6M9 145 aa11.09□□□□□ -0.63
VLDLR-202ENST00000382099 LY6G5BQ8NDX9 201 aa11.09□□□□□ -0.63
VLDLR-202ENST00000382099 IGHV4OR15-8A0A075B7B6 117 aa11.09□□□□□ -0.63
VLDLR-202ENST00000382099 A0A087WW49 117 aa11.09□□□□□ -0.63
VLDLR-202ENST00000382099 IGHG2P01859 326 aa11.09□□□□□ -0.63
VLDLR-202ENST00000382099 PLA2G2CQ5R387 149 aa11.09□□□□□ -0.63
VLDLR-202ENST00000382099 C20orf203Q8NBC4 194 aa11.09□□□□□ -0.63
VLDLR-202ENST00000382099 TRBV27A0A0K0K1C4 114 aa11.09□□□□□ -0.63
VLDLR-202ENST00000382099 Q6JHZ5 121 aa11.09□□□□□ -0.63
VLDLR-202ENST00000382099 MUC4Q99102 2169 aa11.08□□□□□ -0.64
VLDLR-202ENST00000382099 C20orf173Q96LM9 149 aa11.08□□□□□ -0.64
VLDLR-202ENST00000382099 LINC00315P59091 139 aa11.08□□□□□ -0.64
VLDLR-202ENST00000382099 UTP20O75691 2785 aaKnown RBP11.08□□□□□ -0.64
VLDLR-202ENST00000382099 TRBV12-3P01733 135 aa11.07□□□□□ -0.64
VLDLR-202ENST00000382099 VSIG2Q96IQ7 327 aa11.07□□□□□ -0.64
VLDLR-202ENST00000382099 CSPG4Q6UVK1 2322 aa11.07□□□□□ -0.64
VLDLR-202ENST00000382099 SERP1Q9Y6X1 66 aa11.07□□□□□ -0.64
VLDLR-202ENST00000382099 KNCNA6PVL3 124 aa11.07□□□□□ -0.64
VLDLR-202ENST00000382099 LY6LH3BQJ8 138 aa11.07□□□□□ -0.64
VLDLR-202ENST00000382099 LINC00308Q8TCZ7 52 aa11.07□□□□□ -0.64
VLDLR-202ENST00000382099 USP9YO00507 2555 aaPredicted RBP11.06□□□□□ -0.64
VLDLR-202ENST00000382099 C9orf129Q5T035 196 aaKnown RBP11.06□□□□□ -0.64
VLDLR-202ENST00000382099 FAM208BQ5VWN6 2430 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms