RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 IGHV1-24A0A0C4DH33 117 aa12.49□□□□□ -0.41
TMEM88B-201ENST00000378821 TMEM262E9PQX1 116 aa12.49□□□□□ -0.41
TMEM88B-201ENST00000378821 ADCYAP1P18509 176 aa12.49□□□□□ -0.41
TMEM88B-201ENST00000378821 RAB4AP20338 218 aa12.49□□□□□ -0.41
TMEM88B-201ENST00000378821 KCNIP4Q6PIL6 250 aa12.49□□□□□ -0.41
TMEM88B-201ENST00000378821 GAGE6Q13070 117 aa12.48□□□□□ -0.41
TMEM88B-201ENST00000378821 SRRM2Q9UQ35 2752 aaKnown RBP12.48□□□□□ -0.41
TMEM88B-201ENST00000378821 VPS13BQ7Z7G8 4022 aa12.47□□□□□ -0.41
TMEM88B-201ENST00000378821 PPP1R2P9O14990 202 aa12.47□□□□□ -0.41
TMEM88B-201ENST00000378821 INAFM2P0DMQ5 153 aa12.47□□□□□ -0.41
TMEM88B-201ENST00000378821 MRPL54Q6P161 138 aaKnown RBP12.47□□□□□ -0.41
TMEM88B-201ENST00000378821 ATRAIDQ6UW56 229 aa12.47□□□□□ -0.41
TMEM88B-201ENST00000378821 Q6ZSA8 131 aa12.47□□□□□ -0.41
TMEM88B-201ENST00000378821 COMMD7Q86VX2 200 aa12.47□□□□□ -0.41
TMEM88B-201ENST00000378821 FAM30AQ9NZY2 134 aa12.47□□□□□ -0.41
TMEM88B-201ENST00000378821 TMEM218A2RU14 115 aa12.46□□□□□ -0.41
TMEM88B-201ENST00000378821 RPS10P46783 165 aaKnown RBP12.46□□□□□ -0.41
TMEM88B-201ENST00000378821 CAMPP49913 170 aa12.46□□□□□ -0.41
TMEM88B-201ENST00000378821 PKIAP61925 76 aa12.46□□□□□ -0.41
TMEM88B-201ENST00000378821 COTL1Q14019 142 aa12.46□□□□□ -0.41
TMEM88B-201ENST00000378821 Q8N976 141 aa12.46□□□□□ -0.41
TMEM88B-201ENST00000378821 MRAP2Q96G30 205 aa12.46□□□□□ -0.41
TMEM88B-201ENST00000378821 TMEM243Q9BU79 118 aa12.46□□□□□ -0.41
TMEM88B-201ENST00000378821 TRBV6-5A0A0K0K1A5 114 aa12.45□□□□□ -0.42
TMEM88B-201ENST00000378821 A0A1B0GXF2 115 aa12.45□□□□□ -0.42
TMEM88B-201ENST00000378821 SDHAF1A6NFY7 115 aa12.45□□□□□ -0.42
TMEM88B-201ENST00000378821 SMKR1H3BMG3 65 aa12.45□□□□□ -0.42
TMEM88B-201ENST00000378821 NCR2O95944 276 aa12.45□□□□□ -0.42
TMEM88B-201ENST00000378821 SMR3BP02814 79 aaPredicted RBP12.45□□□□□ -0.42
TMEM88B-201ENST00000378821 ELOBQ15370 118 aa12.45□□□□□ -0.42
TMEM88B-201ENST00000378821 UBE2WQ96B02 151 aa12.45□□□□□ -0.42
TMEM88B-201ENST00000378821 A0A1B0GW15 77 aa12.44□□□□□ -0.42
TMEM88B-201ENST00000378821 F8W036 122 aa12.44□□□□□ -0.42
TMEM88B-201ENST00000378821 MT-ND4LP03901 98 aa12.44□□□□□ -0.42
TMEM88B-201ENST00000378821 AMTP48728 403 aa12.44□□□□□ -0.42
TMEM88B-201ENST00000378821 RBX1P62877 108 aa12.44□□□□□ -0.42
TMEM88B-201ENST00000378821 ANAPC16Q96DE5 110 aa12.44□□□□□ -0.42
TMEM88B-201ENST00000378821 RMI2Q96E14 147 aa12.44□□□□□ -0.42
TMEM88B-201ENST00000378821 FAM229AH3BQW9 127 aa12.43□□□□□ -0.42
TMEM88B-201ENST00000378821 ANGP03950 147 aaKnown RBP12.43□□□□□ -0.42
TMEM88B-201ENST00000378821 HBBP68871 147 aa12.43□□□□□ -0.42
TMEM88B-201ENST00000378821 MRPL51Q4U2R6 128 aaKnown RBP12.43□□□□□ -0.42
TMEM88B-201ENST00000378821 FAM104BQ5XKR9 115 aa12.43□□□□□ -0.42
TMEM88B-201ENST00000378821 ST20Q9HBF5 79 aa12.43□□□□□ -0.42
TMEM88B-201ENST00000378821 LINC00862A6NCI5 91 aa12.42□□□□□ -0.42
TMEM88B-201ENST00000378821 HAMPP81172 84 aa12.42□□□□□ -0.42
TMEM88B-201ENST00000378821 ENHOQ6UWT2 76 aa12.42□□□□□ -0.42
TMEM88B-201ENST00000378821 BAALCQ8WXS3 180 aa12.42□□□□□ -0.42
TMEM88B-201ENST00000378821 DNAH8Q96JB1 4490 aa12.42□□□□□ -0.42
TMEM88B-201ENST00000378821 IGKV2D-24A0A075B6R9 120 aa12.41□□□□□ -0.42
TMEM88B-201ENST00000378821 LECT2O14960 151 aa12.41□□□□□ -0.42
TMEM88B-201ENST00000378821 CRPP02741 224 aa12.41□□□□□ -0.42
TMEM88B-201ENST00000378821 NRACQ8N912 160 aa12.41□□□□□ -0.42
TMEM88B-201ENST00000378821 I3L3M4 83 aa12.4□□□□□ -0.42
TMEM88B-201ENST00000378821 APCSP02743 223 aa12.4□□□□□ -0.42
TMEM88B-201ENST00000378821 S100A8P05109 93 aa12.4□□□□□ -0.42
TMEM88B-201ENST00000378821 PMCHP20382 165 aa12.4□□□□□ -0.42
TMEM88B-201ENST00000378821 Q0VG73 95 aa12.4□□□□□ -0.42
TMEM88B-201ENST00000378821 CLPSL2Q6UWE3 100 aa12.4□□□□□ -0.42
TMEM88B-201ENST00000378821 ATP5L2Q7Z4Y8 100 aa12.4□□□□□ -0.42
TMEM88B-201ENST00000378821 SEC11CQ9BY50 192 aa12.4□□□□□ -0.42
TMEM88B-201ENST00000378821 IGLV4-60A0A075B6I1 120 aa12.39□□□□□ -0.43
TMEM88B-201ENST00000378821 UBE2L6O14933 153 aa12.39□□□□□ -0.43
TMEM88B-201ENST00000378821 TSHBP01222 138 aa12.39□□□□□ -0.43
TMEM88B-201ENST00000378821 POLR2KP53803 58 aaKnown RBP12.39□□□□□ -0.43
TMEM88B-201ENST00000378821 C20orf203Q8NBC4 194 aa12.39□□□□□ -0.43
TMEM88B-201ENST00000378821 PRR34Q9NV39 138 aa12.39□□□□□ -0.43
TMEM88B-201ENST00000378821 TMEM242Q9NWH2 141 aa12.39□□□□□ -0.43
TMEM88B-201ENST00000378821 A0A1B0GUV1 79 aa12.38□□□□□ -0.43
TMEM88B-201ENST00000378821 LINC00269Q8N2A0 174 aa12.38□□□□□ -0.43
TMEM88B-201ENST00000378821 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.37□□□□□ -0.43
TMEM88B-201ENST00000378821 TRBV27A0A0K0K1C4 114 aa12.37□□□□□ -0.43
TMEM88B-201ENST00000378821 IGKV2-29A2NJV5 120 aaPredicted RBP12.37□□□□□ -0.43
TMEM88B-201ENST00000378821 C1orf43Q9BWL3 253 aa12.37□□□□□ -0.43
TMEM88B-201ENST00000378821 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.36□□□□□ -0.43
TMEM88B-201ENST00000378821 PPP1R17O96001 155 aa12.36□□□□□ -0.43
TMEM88B-201ENST00000378821 CKS2P33552 79 aa12.36□□□□□ -0.43
TMEM88B-201ENST00000378821 SUMO2P61956 95 aaKnown RBP12.36□□□□□ -0.43
TMEM88B-201ENST00000378821 MIAQ16674 131 aa12.36□□□□□ -0.43
TMEM88B-201ENST00000378821 HERC1Q15751 4861 aa12.36□□□□□ -0.43
TMEM88B-201ENST00000378821 D6R8Y8 96 aa12.35□□□□□ -0.43
TMEM88B-201ENST00000378821 C10orf91Q5T1B1 145 aa12.35□□□□□ -0.43
TMEM88B-201ENST00000378821 ESDP10768 282 aa12.34□□□□□ -0.43
TMEM88B-201ENST00000378821 REG3AQ06141 175 aa12.34□□□□□ -0.43
TMEM88B-201ENST00000378821 BTF3L4Q96K17 158 aa12.34□□□□□ -0.43
TMEM88B-201ENST00000378821 DMBT1Q9UGM3 2413 aaPredicted RBP12.34□□□□□ -0.43
TMEM88B-201ENST00000378821 MYCBP2O75592 4640 aa12.34□□□□□ -0.43
TMEM88B-201ENST00000378821 TRBV24-1A0A075B6N3 115 aa12.33□□□□□ -0.44
TMEM88B-201ENST00000378821 H7C423 109 aa12.33□□□□□ -0.44
TMEM88B-201ENST00000378821 VCYO14598 125 aa12.33□□□□□ -0.44
TMEM88B-201ENST00000378821 IMMP2LQ96T52 175 aa12.33□□□□□ -0.44
TMEM88B-201ENST00000378821 CTDSP1Q9GZU7 261 aa12.33□□□□□ -0.44
TMEM88B-201ENST00000378821 CARHSP1Q9Y2V2 147 aaKnown RBP12.33□□□□□ -0.44
TMEM88B-201ENST00000378821 FLG2Q5D862 2391 aaPredicted RBP12.32□□□□□ -0.44
TMEM88B-201ENST00000378821 TNFRSF6BO95407 300 aa12.32□□□□□ -0.44
TMEM88B-201ENST00000378821 NPYP01303 97 aa12.32□□□□□ -0.44
TMEM88B-201ENST00000378821 FGF6P10767 208 aa12.32□□□□□ -0.44
TMEM88B-201ENST00000378821 AMMECR1LQ6DCA0 310 aa12.32□□□□□ -0.44
TMEM88B-201ENST00000378821 RNASEKQ6P5S7 137 aaKnown RBP12.32□□□□□ -0.44
TMEM88B-201ENST00000378821 KRTAP26-1Q6PEX3 210 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms