RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 Q6YL49 198 aa11.4□□□□□ -0.59
NPHP4-201ENST00000378156 LINC00643Q86TS7 51 aa11.4□□□□□ -0.59
NPHP4-201ENST00000378156 DOPEY1Q5JWR5 2465 aa11.39□□□□□ -0.59
NPHP4-201ENST00000378156 K7EQD1 137 aa11.39□□□□□ -0.59
NPHP4-201ENST00000378156 MRPL23Q16540 153 aaKnown RBP11.39□□□□□ -0.59
NPHP4-201ENST00000378156 Q6ZQT7 251 aa11.39□□□□□ -0.59
NPHP4-201ENST00000378156 DAZ2Q13117 558 aaKnown RBP11.38□□□□□ -0.59
NPHP4-201ENST00000378156 DAZ4Q86SG3 579 aaKnown RBP11.38□□□□□ -0.59
NPHP4-201ENST00000378156 DAZ3Q9NR90 486 aaKnown RBP11.38□□□□□ -0.59
NPHP4-201ENST00000378156 C5orf38Q86SI9 138 aa11.37□□□□□ -0.59
NPHP4-201ENST00000378156 COL5A1P20908 1838 aaPredicted RBP11.37□□□□□ -0.59
NPHP4-201ENST00000378156 IGLC6P0CF74 106 aa11.37□□□□□ -0.59
NPHP4-201ENST00000378156 MP68P56378 58 aa11.37□□□□□ -0.59
NPHP4-201ENST00000378156 PRRC2CQ9Y520 2896 aaKnown RBP11.37□□□□□ -0.59
NPHP4-201ENST00000378156 MDFICQ9P1T7 246 aa11.37□□□□□ -0.59
NPHP4-201ENST00000378156 IGLV2-11P01706 119 aa11.36□□□□□ -0.59
NPHP4-201ENST00000378156 COX7B2Q8TF08 81 aa11.36□□□□□ -0.59
NPHP4-201ENST00000378156 DSCAML1Q8TD84 2053 aa11.36□□□□□ -0.59
NPHP4-201ENST00000378156 INSL3P51460 131 aa11.36□□□□□ -0.59
NPHP4-201ENST00000378156 NDUFA11Q86Y39 141 aa11.36□□□□□ -0.59
NPHP4-201ENST00000378156 TRBV7-3A0A075B6L6 115 aa11.36□□□□□ -0.59
NPHP4-201ENST00000378156 IGKV2D-24A0A075B6R9 120 aa11.36□□□□□ -0.59
NPHP4-201ENST00000378156 HIST2H2BCQ6DN03 193 aa11.36□□□□□ -0.59
NPHP4-201ENST00000378156 C5orf47Q569G3 176 aa11.35□□□□□ -0.59
NPHP4-201ENST00000378156 Q6ZUT4 128 aa11.35□□□□□ -0.59
NPHP4-201ENST00000378156 ESM1Q9NQ30 184 aa11.35□□□□□ -0.59
NPHP4-201ENST00000378156 NREPQ16612 68 aa11.35□□□□□ -0.59
NPHP4-201ENST00000378156 DEFB135Q30KP9 77 aa11.35□□□□□ -0.59
NPHP4-201ENST00000378156 VSIG2Q96IQ7 327 aa11.35□□□□□ -0.59
NPHP4-201ENST00000378156 CHD7Q9P2D1 2997 aa11.35□□□□□ -0.59
NPHP4-201ENST00000378156 CDSNQ15517 529 aa11.35□□□□□ -0.59
NPHP4-201ENST00000378156 MAP6D1Q9H9H5 199 aa11.35□□□□□ -0.59
NPHP4-201ENST00000378156 PDE6GP18545 87 aa11.34□□□□□ -0.59
NPHP4-201ENST00000378156 C5orf42Q9H799 3197 aa11.34□□□□□ -0.59
NPHP4-201ENST00000378156 EXPH5Q8NEV8 1989 aa11.34□□□□□ -0.59
NPHP4-201ENST00000378156 SMAD5-AS1Q9Y6J3 95 aa11.34□□□□□ -0.59
NPHP4-201ENST00000378156 LINC00310P59036 64 aa11.34□□□□□ -0.59
NPHP4-201ENST00000378156 HTTP42858 3142 aa11.34□□□□□ -0.59
NPHP4-201ENST00000378156 HHLA3Q9XRX5 114 aa11.33□□□□□ -0.6
NPHP4-201ENST00000378156 IGHV1-58A0A0C4DH39 117 aa11.33□□□□□ -0.6
NPHP4-201ENST00000378156 Q9HAA7 133 aa11.33□□□□□ -0.6
NPHP4-201ENST00000378156 PTH2Q96A98 100 aa11.33□□□□□ -0.6
NPHP4-201ENST00000378156 K7EQG2 157 aa11.33□□□□□ -0.6
NPHP4-201ENST00000378156 LECT2O14960 151 aa11.33□□□□□ -0.6
NPHP4-201ENST00000378156 ZFAND3Q9H8U3 227 aa11.32□□□□□ -0.6
NPHP4-201ENST00000378156 ETDCA0A1B0GVM5 59 aa11.32□□□□□ -0.6
NPHP4-201ENST00000378156 COX7A2LO14548 114 aa11.32□□□□□ -0.6
NPHP4-201ENST00000378156 NDUFV3P56181 108 aaKnown RBP11.32□□□□□ -0.6
NPHP4-201ENST00000378156 RNF183Q96D59 192 aa11.32□□□□□ -0.6
NPHP4-201ENST00000378156 TMEM263Q8WUH6 116 aaKnown RBP11.31□□□□□ -0.6
NPHP4-201ENST00000378156 TM2D2Q9BX73 214 aa11.31□□□□□ -0.6
NPHP4-201ENST00000378156 CLEC2BQ92478 149 aa11.31□□□□□ -0.6
NPHP4-201ENST00000378156 TMEM256-PLSCR3K7ERE1 68 aa11.31□□□□□ -0.6
NPHP4-201ENST00000378156 WFDC9Q8NEX5 89 aa11.31□□□□□ -0.6
NPHP4-201ENST00000378156 IGLV10-54A0A075B6I4 117 aa11.31□□□□□ -0.6
NPHP4-201ENST00000378156 CXCL5P42830 114 aa11.31□□□□□ -0.6
NPHP4-201ENST00000378156 UQCRQO14949 82 aa11.3□□□□□ -0.6
NPHP4-201ENST00000378156 DEFB4AO15263 64 aa11.3□□□□□ -0.6
NPHP4-201ENST00000378156 TCL1BO95988 128 aa11.3□□□□□ -0.6
NPHP4-201ENST00000378156 C20orf203Q8NBC4 194 aa11.3□□□□□ -0.6
NPHP4-201ENST00000378156 DEFB105AQ8NG35 78 aa11.3□□□□□ -0.6
NPHP4-201ENST00000378156 FN1P02751 2386 aaKnown RBP11.3□□□□□ -0.6
NPHP4-201ENST00000378156 Q6ZSV7 163 aa11.3□□□□□ -0.6
NPHP4-201ENST00000378156 C20orf173Q96LM9 149 aa11.3□□□□□ -0.6
NPHP4-201ENST00000378156 Q8N6K4 173 aa11.29□□□□□ -0.6
NPHP4-201ENST00000378156 CCL18P55774 89 aa11.29□□□□□ -0.6
NPHP4-201ENST00000378156 DEFB114Q30KQ6 69 aa11.29□□□□□ -0.6
NPHP4-201ENST00000378156 SPANXB1Q9NS25 103 aaPredicted RBP11.29□□□□□ -0.6
NPHP4-201ENST00000378156 DAND5Q8N907 189 aa11.29□□□□□ -0.6
NPHP4-201ENST00000378156 BPTFQ12830 3046 aa11.29□□□□□ -0.6
NPHP4-201ENST00000378156 NDUFS5O43920 106 aa11.29□□□□□ -0.6
NPHP4-201ENST00000378156 PKIGQ9Y2B9 76 aa11.29□□□□□ -0.6
NPHP4-201ENST00000378156 LRRK2Q5S007 2527 aa11.29□□□□□ -0.6
NPHP4-201ENST00000378156 NDUFB1O75438 58 aa11.28□□□□□ -0.6
NPHP4-201ENST00000378156 ODF3Q96PU9 254 aa11.28□□□□□ -0.6
NPHP4-201ENST00000378156 IGHV3-30-3P0DP02 117 aa11.28□□□□□ -0.6
NPHP4-201ENST00000378156 CAMK2N2Q96S95 79 aa11.28□□□□□ -0.6
NPHP4-201ENST00000378156 UBE2BP63146 152 aa11.28□□□□□ -0.6
NPHP4-201ENST00000378156 MIAQ16674 131 aa11.28□□□□□ -0.6
NPHP4-201ENST00000378156 C10orf99Q6UWK7 81 aa11.28□□□□□ -0.6
NPHP4-201ENST00000378156 SPATA25Q9BR10 227 aa11.28□□□□□ -0.6
NPHP4-201ENST00000378156 TRBV10-1A0A0K0K1A3 114 aa11.27□□□□□ -0.61
NPHP4-201ENST00000378156 INAFM1C9JVW0 142 aa11.27□□□□□ -0.61
NPHP4-201ENST00000378156 IGHV3-30P01768 117 aa11.27□□□□□ -0.61
NPHP4-201ENST00000378156 IGHV3-33P01772 117 aa11.27□□□□□ -0.61
NPHP4-201ENST00000378156 MT-ATP8P03928 68 aa11.27□□□□□ -0.61
NPHP4-201ENST00000378156 IGHV3-30-5P0DP03 117 aa11.27□□□□□ -0.61
NPHP4-201ENST00000378156 RNF185Q96GF1 192 aa11.27□□□□□ -0.61
NPHP4-201ENST00000378156 PRO0255Q9UI72 69 aa11.27□□□□□ -0.61
NPHP4-201ENST00000378156 RBX1P62877 108 aa11.26□□□□□ -0.61
NPHP4-201ENST00000378156 HIGD2BQ4VC39 106 aa11.26□□□□□ -0.61
NPHP4-201ENST00000378156 FASNP49327 2511 aaKnown RBP11.25□□□□□ -0.61
NPHP4-201ENST00000378156 IGKV2D-26A0A0A0MRZ7 120 aa11.25□□□□□ -0.61
NPHP4-201ENST00000378156 MIR7-3HGQ8N6C7 128 aa11.25□□□□□ -0.61
NPHP4-201ENST00000378156 IGHV4-4A0A075B6R2 117 aa11.24□□□□□ -0.61
NPHP4-201ENST00000378156 U3KQK5 164 aa11.24□□□□□ -0.61
NPHP4-201ENST00000378156 ZFAND2AQ8N6M9 145 aa11.24□□□□□ -0.61
NPHP4-201ENST00000378156 ZNF462Q96JM2 2506 aa11.24□□□□□ -0.61
NPHP4-201ENST00000378156 HIST2H2BDQ6DRA6 164 aa11.24□□□□□ -0.61
NPHP4-201ENST00000378156 PSMG3-AS1Q96PY0 264 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms