RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 LINC01619G3V211 115 aa9.51□□□□□ -0.89
USP11-204ENST00000377107 IGHV4-31P0DP07 118 aa9.51□□□□□ -0.89
USP11-204ENST00000377107 DAND5Q8N907 189 aa9.51□□□□□ -0.89
USP11-204ENST00000377107 Q6ZSN1 163 aa9.5□□□□□ -0.89
USP11-204ENST00000377107 TIMM21Q9BVV7 248 aa9.5□□□□□ -0.89
USP11-204ENST00000377107 GAGE12HA6NDE8 117 aa9.49□□□□□ -0.89
USP11-204ENST00000377107 MUSTN1Q8IVN3 82 aa9.49□□□□□ -0.89
USP11-204ENST00000377107 SIGMAR1Q99720 223 aa9.49□□□□□ -0.89
USP11-204ENST00000377107 H3BMM0 161 aa9.49□□□□□ -0.89
USP11-204ENST00000377107 NXPH4O95158 308 aa9.49□□□□□ -0.89
USP11-204ENST00000377107 Q6YL49 198 aa9.49□□□□□ -0.89
USP11-204ENST00000377107 NDUFA11Q86Y39 141 aa9.49□□□□□ -0.89
USP11-204ENST00000377107 PEMTQ9UBM1 199 aa9.49□□□□□ -0.89
USP11-204ENST00000377107 IGLV4-3A0A075B6K6 122 aa9.49□□□□□ -0.89
USP11-204ENST00000377107 CFC1BP0CG36 223 aa9.48□□□□□ -0.89
USP11-204ENST00000377107 CFC1P0CG37 223 aa9.48□□□□□ -0.89
USP11-204ENST00000377107 ZNF22P17026 224 aaPredicted RBP9.48□□□□□ -0.89
USP11-204ENST00000377107 STHQ8IWL8 128 aa9.48□□□□□ -0.89
USP11-204ENST00000377107 RHODO00212 210 aa9.48□□□□□ -0.89
USP11-204ENST00000377107 PRO1854Q9UHT4 67 aa9.48□□□□□ -0.89
USP11-204ENST00000377107 RBMY1BA6NDE4 496 aaKnown RBP9.48□□□□□ -0.89
USP11-204ENST00000377107 RBMY1EA6NEQ0 496 aaKnown RBP9.48□□□□□ -0.89
USP11-204ENST00000377107 RBMY1DP0C7P1 496 aaKnown RBP9.48□□□□□ -0.89
USP11-204ENST00000377107 ZNF415Q09FC8 603 aa9.48□□□□□ -0.89
USP11-204ENST00000377107 TRAV13-1A0A0B4J241 112 aa9.47□□□□□ -0.89
USP11-204ENST00000377107 C9JAW5 83 aa9.47□□□□□ -0.89
USP11-204ENST00000377107 TCL1BO95988 128 aa9.47□□□□□ -0.89
USP11-204ENST00000377107 RPL35AP18077 110 aaKnown RBP9.47□□□□□ -0.89
USP11-204ENST00000377107 ERG28Q9UKR5 140 aa9.47□□□□□ -0.89
USP11-204ENST00000377107 J3QLI3 93 aa9.47□□□□□ -0.89
USP11-204ENST00000377107 RHOHQ15669 191 aa9.47□□□□□ -0.89
USP11-204ENST00000377107 NBEAL2Q6ZNJ1 2754 aa9.46□□□□□ -0.89
USP11-204ENST00000377107 TMEM238C9JI98 176 aa9.46□□□□□ -0.89
USP11-204ENST00000377107 M0R2P5 195 aa9.46□□□□□ -0.89
USP11-204ENST00000377107 MAP6D1Q9H9H5 199 aa9.46□□□□□ -0.89
USP11-204ENST00000377107 BRI3O95415 125 aa9.46□□□□□ -0.9
USP11-204ENST00000377107 IGHV3-30P01768 117 aa9.46□□□□□ -0.9
USP11-204ENST00000377107 IGHV3-30-3P0DP02 117 aa9.46□□□□□ -0.9
USP11-204ENST00000377107 IGHV3-30-5P0DP03 117 aa9.46□□□□□ -0.9
USP11-204ENST00000377107 SLC25A29Q8N8R3 303 aa9.46□□□□□ -0.9
USP11-204ENST00000377107 LYRM7Q5U5X0 104 aa9.45□□□□□ -0.9
USP11-204ENST00000377107 Q6ZUT4 128 aa9.45□□□□□ -0.9
USP11-204ENST00000377107 NDUFA12Q9UI09 145 aa9.45□□□□□ -0.9
USP11-204ENST00000377107 TRBV6-5A0A0K0K1A5 114 aa9.45□□□□□ -0.9
USP11-204ENST00000377107 DEFB113Q30KQ7 82 aa9.45□□□□□ -0.9
USP11-204ENST00000377107 Q6ZSV7 163 aa9.45□□□□□ -0.9
USP11-204ENST00000377107 C10orf126Q8N4M7 172 aa9.45□□□□□ -0.9
USP11-204ENST00000377107 LINC00467Q9BRT7 94 aa9.45□□□□□ -0.9
USP11-204ENST00000377107 APCP25054 2843 aa9.45□□□□□ -0.9
USP11-204ENST00000377107 HECTD1Q9ULT8 2610 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 TMEM223A0PJW6 202 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 LEPROTO15243 131 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 WFDC11Q8NEX6 87 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 FASNP49327 2511 aaKnown RBP9.44□□□□□ -0.9
USP11-204ENST00000377107 A8MWV9 139 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 INSP01308 110 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 WFDC10AQ9H1F0 79 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 GAGE12JA6NER3 117 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 NDUFA7O95182 113 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 UBE2D1P51668 147 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 GAGE4Q13068 117 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 GAGE5Q13069 117 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 NSUN5P1Q3KNT7 163 aa9.44□□□□□ -0.9
USP11-204ENST00000377107 ODF3Q96PU9 254 aa9.43□□□□□ -0.9
USP11-204ENST00000377107 CFAP126Q5VTH2 177 aa9.43□□□□□ -0.9
USP11-204ENST00000377107 A0A0J9YXY3 114 aa9.42□□□□□ -0.9
USP11-204ENST00000377107 DEFB114Q30KQ6 69 aa9.42□□□□□ -0.9
USP11-204ENST00000377107 TRGV2A0A075B6R0 118 aa9.42□□□□□ -0.9
USP11-204ENST00000377107 CIDEAO60543 219 aa9.42□□□□□ -0.9
USP11-204ENST00000377107 RPL32P62910 135 aaKnown RBP9.42□□□□□ -0.9
USP11-204ENST00000377107 FOXI1Q12951 378 aa9.42□□□□□ -0.9
USP11-204ENST00000377107 POM121L12Q8N7R1 296 aa9.42□□□□□ -0.9
USP11-204ENST00000377107 GCN1Q92616 2671 aaKnown RBP9.41□□□□□ -0.9
USP11-204ENST00000377107 ITPR2Q14571 2701 aa9.41□□□□□ -0.9
USP11-204ENST00000377107 SMCPP49901 116 aaPredicted RBP9.41□□□□□ -0.9
USP11-204ENST00000377107 NFE4Q86UQ8 179 aa9.41□□□□□ -0.9
USP11-204ENST00000377107 NOP10Q9NPE3 64 aaKnown RBP9.41□□□□□ -0.9
USP11-204ENST00000377107 YAE1D1Q9NRH1 226 aa9.41□□□□□ -0.9
USP11-204ENST00000377107 CDKN2A-AS1Q9UH64 79 aa9.41□□□□□ -0.9
USP11-204ENST00000377107 TMEM89A2RUT3 159 aa9.4□□□□□ -0.9
USP11-204ENST00000377107 Q6ZTI0 123 aa9.4□□□□□ -0.9
USP11-204ENST00000377107 TOMM7Q9P0U1 55 aa9.4□□□□□ -0.9
USP11-204ENST00000377107 GAGE7O76087 117 aa9.4□□□□□ -0.9
USP11-204ENST00000377107 GAGE12FP0CL80 117 aa9.4□□□□□ -0.9
USP11-204ENST00000377107 GAGE12GP0CL81 117 aa9.4□□□□□ -0.9
USP11-204ENST00000377107 GAGE12IP0CL82 117 aa9.4□□□□□ -0.9
USP11-204ENST00000377107 MEIG1Q5JSS6 88 aa9.4□□□□□ -0.9
USP11-204ENST00000377107 HELZ2Q9BYK8 2649 aaKnown RBP9.4□□□□□ -0.9
USP11-204ENST00000377107 A0A096LNT2 108 aa9.4□□□□□ -0.91
USP11-204ENST00000377107 PLA2G2AP14555 144 aa9.4□□□□□ -0.91
USP11-204ENST00000377107 ZNF843Q8N446 348 aa9.4□□□□□ -0.91
USP11-204ENST00000377107 CITED2Q99967 270 aaPredicted RBP9.4□□□□□ -0.91
USP11-204ENST00000377107 C1QTNF4Q9BXJ3 329 aa9.4□□□□□ -0.91
USP11-204ENST00000377107 PRO0461Q9UI25 63 aa9.4□□□□□ -0.91
USP11-204ENST00000377107 CCL24O00175 119 aa9.39□□□□□ -0.91
USP11-204ENST00000377107 SLC25A20O43772 301 aa9.39□□□□□ -0.91
USP11-204ENST00000377107 ADAMTSL4-AS1Q5T5F5 129 aa9.39□□□□□ -0.91
USP11-204ENST00000377107 ANKRD29Q8N6D5 301 aa9.39□□□□□ -0.91
USP11-204ENST00000377107 C4orf3Q8WVX3 66 aa9.38□□□□□ -0.91
USP11-204ENST00000377107 DNAJC9-AS1A6NH13 148 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms