RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 PKD1P98161 4303 aa13.4□□□□□ -0.26
DDR1-228ENST00000376575 PHOX2AO14813 284 aa13.4□□□□□ -0.26
DDR1-228ENST00000376575 IGHV3-30P01768 117 aa13.4□□□□□ -0.26
DDR1-228ENST00000376575 IGHV3-33P01772 117 aa13.4□□□□□ -0.26
DDR1-228ENST00000376575 IGHV3-30-3P0DP02 117 aa13.4□□□□□ -0.26
DDR1-228ENST00000376575 IGHV3-30-5P0DP03 117 aa13.4□□□□□ -0.26
DDR1-228ENST00000376575 HECTD4Q9Y4D8 3996 aa13.39□□□□□ -0.27
DDR1-228ENST00000376575 TNFRSF6BO95407 300 aa13.39□□□□□ -0.27
DDR1-228ENST00000376575 PKIAP61925 76 aa13.39□□□□□ -0.27
DDR1-228ENST00000376575 LAGE3Q14657 143 aa13.39□□□□□ -0.27
DDR1-228ENST00000376575 ATRAIDQ6UW56 229 aa13.39□□□□□ -0.27
DDR1-228ENST00000376575 LINC00336Q6ZUF6 198 aa13.39□□□□□ -0.27
DDR1-228ENST00000376575 ORMDL3Q8N138 153 aa13.39□□□□□ -0.27
DDR1-228ENST00000376575 VCYO14598 125 aa13.38□□□□□ -0.27
DDR1-228ENST00000376575 TSHBP01222 138 aa13.38□□□□□ -0.27
DDR1-228ENST00000376575 DEFB104AQ8WTQ1 72 aa13.38□□□□□ -0.27
DDR1-228ENST00000376575 CHCHD5Q9BSY4 110 aa13.38□□□□□ -0.27
DDR1-228ENST00000376575 TMEM243Q9BU79 118 aa13.38□□□□□ -0.27
DDR1-228ENST00000376575 GNB1LQ9BYB4 327 aa13.38□□□□□ -0.27
DDR1-228ENST00000376575 PRSS47A8MTI9 375 aa13.37□□□□□ -0.27
DDR1-228ENST00000376575 NPYP01303 97 aa13.37□□□□□ -0.27
DDR1-228ENST00000376575 PMCHP20382 165 aa13.37□□□□□ -0.27
DDR1-228ENST00000376575 ELOBQ15370 118 aa13.37□□□□□ -0.27
DDR1-228ENST00000376575 MPV17L2Q567V2 206 aa13.37□□□□□ -0.27
DDR1-228ENST00000376575 YPEL4Q96NS1 127 aa13.37□□□□□ -0.27
DDR1-228ENST00000376575 A0A087WX48 190 aa13.36□□□□□ -0.27
DDR1-228ENST00000376575 A0A1B0GUV1 79 aa13.36□□□□□ -0.27
DDR1-228ENST00000376575 ESDP10768 282 aa13.36□□□□□ -0.27
DDR1-228ENST00000376575 AMTP48728 403 aa13.36□□□□□ -0.27
DDR1-228ENST00000376575 COX19Q49B96 90 aa13.36□□□□□ -0.27
DDR1-228ENST00000376575 LAMTOR2Q9Y2Q5 125 aa13.36□□□□□ -0.27
DDR1-228ENST00000376575 EPPK1P58107 5090 aaKnown RBP13.36□□□□□ -0.27
DDR1-228ENST00000376575 TMEM262E9PQX1 116 aa13.35□□□□□ -0.27
DDR1-228ENST00000376575 HLA-DQA1P01909 254 aa13.35□□□□□ -0.27
DDR1-228ENST00000376575 GAGE6Q13070 117 aa13.35□□□□□ -0.27
DDR1-228ENST00000376575 NFE4Q86UQ8 179 aa13.35□□□□□ -0.27
DDR1-228ENST00000376575 PRELID3AQ96N28 172 aa13.35□□□□□ -0.27
DDR1-228ENST00000376575 H7C423 109 aa13.34□□□□□ -0.27
DDR1-228ENST00000376575 APCSP02743 223 aa13.34□□□□□ -0.27
DDR1-228ENST00000376575 RBX1P62877 108 aa13.34□□□□□ -0.27
DDR1-228ENST00000376575 TGIF2-C20orf24A0A0A6YYL0 155 aa13.33□□□□□ -0.28
DDR1-228ENST00000376575 Q8N976 141 aa13.33□□□□□ -0.28
DDR1-228ENST00000376575 SMIM2Q9BVW6 85 aa13.33□□□□□ -0.28
DDR1-228ENST00000376575 KLK12Q9UKR0 248 aa13.33□□□□□ -0.28
DDR1-228ENST00000376575 PRSS29PA6NIE9 313 aa13.32□□□□□ -0.28
DDR1-228ENST00000376575 PRR34Q9NV39 138 aa13.32□□□□□ -0.28
DDR1-228ENST00000376575 PKHD1P08F94 4074 aa13.31□□□□□ -0.28
DDR1-228ENST00000376575 TRAV8-3A0A0A6YYJ7 113 aa13.31□□□□□ -0.28
DDR1-228ENST00000376575 A0A1B0GVY2 172 aa13.31□□□□□ -0.28
DDR1-228ENST00000376575 MT-ND6P03923 174 aa13.31□□□□□ -0.28
DDR1-228ENST00000376575 C20orf203Q8NBC4 194 aa13.31□□□□□ -0.28
DDR1-228ENST00000376575 KIR2DL4Q99706 377 aa13.31□□□□□ -0.28
DDR1-228ENST00000376575 TNP2Q05952 138 aa13.3□□□□□ -0.28
DDR1-228ENST00000376575 ENHOQ6UWT2 76 aa13.3□□□□□ -0.28
DDR1-228ENST00000376575 IGLV4-60A0A075B6I1 120 aa13.29□□□□□ -0.28
DDR1-228ENST00000376575 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.29□□□□□ -0.28
DDR1-228ENST00000376575 IGKV2-29A2NJV5 120 aaPredicted RBP13.29□□□□□ -0.28
DDR1-228ENST00000376575 UBE2L6O14933 153 aa13.29□□□□□ -0.28
DDR1-228ENST00000376575 TCAPO15273 167 aa13.29□□□□□ -0.28
DDR1-228ENST00000376575 ANGP03950 147 aaKnown RBP13.28□□□□□ -0.28
DDR1-228ENST00000376575 KIAA1644Q3SXP7 199 aa13.28□□□□□ -0.28
DDR1-228ENST00000376575 SMCO4Q9NRQ5 59 aa13.28□□□□□ -0.28
DDR1-228ENST00000376575 FGF6P10767 208 aa13.27□□□□□ -0.29
DDR1-228ENST00000376575 FCER1GP30273 86 aa13.27□□□□□ -0.29
DDR1-228ENST00000376575 Q0VG73 95 aa13.27□□□□□ -0.29
DDR1-228ENST00000376575 MRPL52Q86TS9 123 aaKnown RBP13.27□□□□□ -0.29
DDR1-228ENST00000376575 UBE2WQ96B02 151 aa13.27□□□□□ -0.29
DDR1-228ENST00000376575 MRPL18Q9H0U6 180 aaKnown RBP13.27□□□□□ -0.29
DDR1-228ENST00000376575 MAP1LC3AQ9H492 121 aa13.27□□□□□ -0.29
DDR1-228ENST00000376575 Q9HAA7 133 aa13.27□□□□□ -0.29
DDR1-228ENST00000376575 DYNC1H1Q14204 4646 aaKnown RBP13.26□□□□□ -0.29
DDR1-228ENST00000376575 ZNF25P17030 456 aaPredicted RBP13.26□□□□□ -0.29
DDR1-228ENST00000376575 CBLN2Q8IUK8 224 aa13.26□□□□□ -0.29
DDR1-228ENST00000376575 LINC00269Q8N2A0 174 aa13.26□□□□□ -0.29
DDR1-228ENST00000376575 ALKBH7Q9BT30 221 aaPredicted RBP13.26□□□□□ -0.29
DDR1-228ENST00000376575 DNAH5Q8TE73 4624 aa13.25□□□□□ -0.29
DDR1-228ENST00000376575 Q8N8P6 123 aa13.25□□□□□ -0.29
DDR1-228ENST00000376575 MIAQ16674 131 aa13.24□□□□□ -0.29
DDR1-228ENST00000376575 TM2D2Q9BX73 214 aa13.24□□□□□ -0.29
DDR1-228ENST00000376575 CSDC2Q9Y534 153 aaKnown RBP13.24□□□□□ -0.29
DDR1-228ENST00000376575 LRCOL1A6NCL2 159 aa13.23□□□□□ -0.29
DDR1-228ENST00000376575 FABP9Q0Z7S8 132 aa13.23□□□□□ -0.29
DDR1-228ENST00000376575 COX11Q9Y6N1 276 aa13.23□□□□□ -0.29
DDR1-228ENST00000376575 LOC389332A0A1B0GUA5 103 aa13.22□□□□□ -0.29
DDR1-228ENST00000376575 K7EMI3 77 aa13.22□□□□□ -0.29
DDR1-228ENST00000376575 CRPP02741 224 aa13.22□□□□□ -0.29
DDR1-228ENST00000376575 REG3AQ06141 175 aa13.22□□□□□ -0.29
DDR1-228ENST00000376575 AMMECR1LQ6DCA0 310 aa13.22□□□□□ -0.29
DDR1-228ENST00000376575 KRTAP26-1Q6PEX3 210 aa13.22□□□□□ -0.29
DDR1-228ENST00000376575 MAPKAPK5-AS1Q8N8E1 139 aa13.22□□□□□ -0.29
DDR1-228ENST00000376575 RMI2Q96E14 147 aa13.22□□□□□ -0.29
DDR1-228ENST00000376575 TIMM21Q9BVV7 248 aa13.22□□□□□ -0.29
DDR1-228ENST00000376575 NXT2Q9NPJ8 142 aaKnown RBP13.22□□□□□ -0.29
DDR1-228ENST00000376575 UBE2D4Q9Y2X8 147 aa13.22□□□□□ -0.29
DDR1-228ENST00000376575 TRAPPC1Q9Y5R8 145 aa13.22□□□□□ -0.29
DDR1-228ENST00000376575 RNASEKQ6P5S7 137 aaKnown RBP13.21□□□□□ -0.29
DDR1-228ENST00000376575 CDC42SE2Q9NRR3 84 aa13.21□□□□□ -0.29
DDR1-228ENST00000376575 A0A087WTM6 91 aa13.2□□□□□ -0.3
DDR1-228ENST00000376575 LINC01546A6NGU7 62 aa13.2□□□□□ -0.3
DDR1-228ENST00000376575 RAB5AP20339 215 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms