RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 ADARB2-AS1A8MUL3 147 aa10.61□□□□□ -0.71
MSH5-201ENST00000375703 H7C2G1 150 aa10.61□□□□□ -0.71
MSH5-201ENST00000375703 TEN1Q86WV5 123 aa10.61□□□□□ -0.71
MSH5-201ENST00000375703 PEMTQ9UBM1 199 aa10.61□□□□□ -0.71
MSH5-201ENST00000375703 A0A0B4J2C4 111 aa10.6□□□□□ -0.71
MSH5-201ENST00000375703 SBSPONQ8IVN8 264 aa10.6□□□□□ -0.71
MSH5-201ENST00000375703 PPDPFLQ8WWR9 84 aa10.6□□□□□ -0.71
MSH5-201ENST00000375703 LINC01587Q99440 93 aa10.6□□□□□ -0.71
MSH5-201ENST00000375703 GEMIN7Q9H840 131 aaKnown RBP10.6□□□□□ -0.71
MSH5-201ENST00000375703 USP9XQ93008 2570 aaPredicted RBP10.6□□□□□ -0.71
MSH5-201ENST00000375703 TRAV8-3A0A0A6YYJ7 113 aa10.6□□□□□ -0.71
MSH5-201ENST00000375703 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.6□□□□□ -0.71
MSH5-201ENST00000375703 PIK3CD-AS1Q5SR53 167 aa10.6□□□□□ -0.71
MSH5-201ENST00000375703 CARD19Q96LW7 228 aa10.6□□□□□ -0.71
MSH5-201ENST00000375703 UTP20O75691 2785 aaKnown RBP10.59□□□□□ -0.71
MSH5-201ENST00000375703 CHCHD7Q9BUK0 85 aa10.59□□□□□ -0.71
MSH5-201ENST00000375703 IGHV1-58A0A0C4DH39 117 aa10.58□□□□□ -0.72
MSH5-201ENST00000375703 KHDC1LQ5JSQ8 128 aa10.58□□□□□ -0.72
MSH5-201ENST00000375703 PRSS2P07478 247 aa10.58□□□□□ -0.72
MSH5-201ENST00000375703 MAP6D1Q9H9H5 199 aa10.58□□□□□ -0.72
MSH5-201ENST00000375703 SS18L2Q9UHA2 77 aa10.58□□□□□ -0.72
MSH5-201ENST00000375703 UBE2D4Q9Y2X8 147 aa10.58□□□□□ -0.72
MSH5-201ENST00000375703 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.57□□□□□ -0.72
MSH5-201ENST00000375703 TINCRA0A1B0GVN0 87 aa10.57□□□□□ -0.72
MSH5-201ENST00000375703 IGKV2-29A2NJV5 120 aaPredicted RBP10.57□□□□□ -0.72
MSH5-201ENST00000375703 Q1RN00 199 aa10.57□□□□□ -0.72
MSH5-201ENST00000375703 DYNLRB2Q8TF09 96 aa10.57□□□□□ -0.72
MSH5-201ENST00000375703 CDIP1Q9H305 208 aa10.57□□□□□ -0.72
MSH5-201ENST00000375703 SPANXA1Q9NS26 97 aa10.57□□□□□ -0.72
MSH5-201ENST00000375703 Q8N2B8 174 aa10.57□□□□□ -0.72
MSH5-201ENST00000375703 CREBBPQ92793 2442 aa10.57□□□□□ -0.72
MSH5-201ENST00000375703 USP9YO00507 2555 aaPredicted RBP10.57□□□□□ -0.72
MSH5-201ENST00000375703 IGHV3-38A0A0C4DH36 116 aa10.57□□□□□ -0.72
MSH5-201ENST00000375703 NDUFA12Q9UI09 145 aa10.57□□□□□ -0.72
MSH5-201ENST00000375703 C11orf72Q8NBR9 251 aa10.56□□□□□ -0.72
MSH5-201ENST00000375703 C4orf3Q8WVX3 66 aa10.56□□□□□ -0.72
MSH5-201ENST00000375703 LITAFQ99732 161 aa10.56□□□□□ -0.72
MSH5-201ENST00000375703 C9JAW5 83 aa10.56□□□□□ -0.72
MSH5-201ENST00000375703 SLC25A20O43772 301 aa10.56□□□□□ -0.72
MSH5-201ENST00000375703 IGHV3-53P01767 116 aa10.56□□□□□ -0.72
MSH5-201ENST00000375703 DEFB114Q30KQ6 69 aa10.56□□□□□ -0.72
MSH5-201ENST00000375703 ANKRD29Q8N6D5 301 aa10.56□□□□□ -0.72
MSH5-201ENST00000375703 VSIG2Q96IQ7 327 aa10.56□□□□□ -0.72
MSH5-201ENST00000375703 DNAJC30Q96LL9 226 aa10.56□□□□□ -0.72
MSH5-201ENST00000375703 SPINK8P0C7L1 97 aa10.55□□□□□ -0.72
MSH5-201ENST00000375703 LINC00467Q9BRT7 94 aa10.55□□□□□ -0.72
MSH5-201ENST00000375703 ZANQ9Y493 2812 aa10.55□□□□□ -0.72
MSH5-201ENST00000375703 A8MZ25 164 aa10.55□□□□□ -0.72
MSH5-201ENST00000375703 ADAMTSL4-AS1Q5T5F5 129 aa10.55□□□□□ -0.72
MSH5-201ENST00000375703 IGSF10Q6WRI0 2623 aa10.54□□□□□ -0.72
MSH5-201ENST00000375703 INSP01308 110 aa10.54□□□□□ -0.72
MSH5-201ENST00000375703 PRB1P04280 392 aa10.54□□□□□ -0.72
MSH5-201ENST00000375703 FHL3Q13643 280 aa10.54□□□□□ -0.72
MSH5-201ENST00000375703 BEAN1Q3B7T3 259 aa10.54□□□□□ -0.72
MSH5-201ENST00000375703 HIST2H2BDQ6DRA6 164 aa10.54□□□□□ -0.72
MSH5-201ENST00000375703 Q6ZUT4 128 aa10.54□□□□□ -0.72
MSH5-201ENST00000375703 PIEZO1Q92508 2521 aa10.53□□□□□ -0.72
MSH5-201ENST00000375703 KRTAP10-9P60411 292 aa10.53□□□□□ -0.72
MSH5-201ENST00000375703 ANKRD17O75179 2603 aaKnown RBP10.53□□□□□ -0.72
MSH5-201ENST00000375703 RS1O15537 224 aa10.53□□□□□ -0.72
MSH5-201ENST00000375703 ATXN8Q156A1 80 aa10.53□□□□□ -0.72
MSH5-201ENST00000375703 SPANXDQ9BXN6 97 aa10.53□□□□□ -0.72
MSH5-201ENST00000375703 SPANXCQ9NY87 97 aa10.53□□□□□ -0.72
MSH5-201ENST00000375703 FBN2P35556 2912 aa10.53□□□□□ -0.72
MSH5-201ENST00000375703 XCL2Q9UBD3 114 aa10.52□□□□□ -0.72
MSH5-201ENST00000375703 MXRA5Q9NR99 2828 aa10.52□□□□□ -0.73
MSH5-201ENST00000375703 TRBV30A0A0K0K1B3 111 aa10.52□□□□□ -0.73
MSH5-201ENST00000375703 M0QXV9 152 aa10.51□□□□□ -0.73
MSH5-201ENST00000375703 DGAT2L7PQ6IED9 249 aa10.51□□□□□ -0.73
MSH5-201ENST00000375703 NACAE9PAV3 2078 aa10.51□□□□□ -0.73
MSH5-201ENST00000375703 PRRC2AP48634 2157 aaKnown RBP10.51□□□□□ -0.73
MSH5-201ENST00000375703 MT-ATP8P03928 68 aa10.51□□□□□ -0.73
MSH5-201ENST00000375703 NPC2P61916 151 aa10.51□□□□□ -0.73
MSH5-201ENST00000375703 MIAQ16674 131 aa10.51□□□□□ -0.73
MSH5-201ENST00000375703 POLQO75417 2590 aa10.51□□□□□ -0.73
MSH5-201ENST00000375703 IGHV3OR16-12A0A075B7B8 117 aa10.5□□□□□ -0.73
MSH5-201ENST00000375703 DEFB113Q30KQ7 82 aa10.5□□□□□ -0.73
MSH5-201ENST00000375703 CDKN2A-AS1Q9UH64 79 aa10.5□□□□□ -0.73
MSH5-201ENST00000375703 TRIAP1O43715 76 aa10.5□□□□□ -0.73
MSH5-201ENST00000375703 XGP55808 180 aa10.5□□□□□ -0.73
MSH5-201ENST00000375703 HERV-K104P63124 156 aa10.5□□□□□ -0.73
MSH5-201ENST00000375703 LINC01620Q4KN68 170 aa10.5□□□□□ -0.73
MSH5-201ENST00000375703 ZFAND6Q6FIF0 208 aa10.5□□□□□ -0.73
MSH5-201ENST00000375703 MYO18BQ8IUG5 2567 aa10.49□□□□□ -0.73
MSH5-201ENST00000375703 TIRAPP58753 221 aa10.49□□□□□ -0.73
MSH5-201ENST00000375703 STHQ8IWL8 128 aa10.49□□□□□ -0.73
MSH5-201ENST00000375703 Q96MF0 132 aa10.49□□□□□ -0.73
MSH5-201ENST00000375703 TMEM262E9PQX1 116 aa10.49□□□□□ -0.73
MSH5-201ENST00000375703 CR1P17927 2039 aa10.48□□□□□ -0.73
MSH5-201ENST00000375703 YAE1D1Q9NRH1 226 aa10.48□□□□□ -0.73
MSH5-201ENST00000375703 ACACBO00763 2458 aa10.48□□□□□ -0.73
MSH5-201ENST00000375703 ODF3L2Q3SX64 289 aa10.48□□□□□ -0.73
MSH5-201ENST00000375703 RNF183Q96D59 192 aa10.48□□□□□ -0.73
MSH5-201ENST00000375703 TMEM101Q96IK0 257 aa10.48□□□□□ -0.73
MSH5-201ENST00000375703 ICOSQ9Y6W8 199 aa10.48□□□□□ -0.73
MSH5-201ENST00000375703 TRGV1A0A0A0MS02 117 aa10.47□□□□□ -0.73
MSH5-201ENST00000375703 C1orf158Q8N1D5 194 aa10.47□□□□□ -0.73
MSH5-201ENST00000375703 COX6CP09669 75 aa10.47□□□□□ -0.73
MSH5-201ENST00000375703 COX6A2Q02221 97 aa10.47□□□□□ -0.73
MSH5-201ENST00000375703 Q6ZSV7 163 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms