RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 CTRLP40313 264 aa9.19□□□□□ -0.94
NELFE-201ENST00000375425 KRTAP10-4P60372 401 aaPredicted RBP9.19□□□□□ -0.94
NELFE-201ENST00000375425 C9orf163Q8N9P6 203 aa9.19□□□□□ -0.94
NELFE-201ENST00000375425 PGLYRP4Q96LB8 373 aa9.19□□□□□ -0.94
NELFE-201ENST00000375425 CNFNQ9BYD5 112 aa9.19□□□□□ -0.94
NELFE-201ENST00000375425 RPP21Q9H633 154 aaKnown RBP9.19□□□□□ -0.94
NELFE-201ENST00000375425 TRAV8-4A0A0B4J246 113 aa9.18□□□□□ -0.94
NELFE-201ENST00000375425 CLRN3Q8NCR9 226 aa9.18□□□□□ -0.94
NELFE-201ENST00000375425 GFRA4Q9GZZ7 299 aa9.18□□□□□ -0.94
NELFE-201ENST00000375425 hCG_2014768A0A024R1R8 64 aa9.17□□□□□ -0.94
NELFE-201ENST00000375425 UBE2L6O14933 153 aa9.17□□□□□ -0.94
NELFE-201ENST00000375425 COTL1Q14019 142 aa9.17□□□□□ -0.94
NELFE-201ENST00000375425 GATD1Q8NB37 220 aa9.17□□□□□ -0.94
NELFE-201ENST00000375425 TRAV26-2A0A0B4J265 109 aa9.16□□□□□ -0.94
NELFE-201ENST00000375425 AMTP48728 403 aa9.16□□□□□ -0.94
NELFE-201ENST00000375425 GTSF1Q8WW33 167 aa9.16□□□□□ -0.94
NELFE-201ENST00000375425 FOXA3P55318 350 aaPredicted RBP9.15□□□□□ -0.94
NELFE-201ENST00000375425 SDIM1Q6ZPB5 146 aa9.15□□□□□ -0.94
NELFE-201ENST00000375425 hDV102S1A0JD36 115 aa9.14□□□□□ -0.95
NELFE-201ENST00000375425 BLOC1S1P78537 153 aa9.14□□□□□ -0.95
NELFE-201ENST00000375425 ALKAL2Q6UX46 152 aa9.14□□□□□ -0.95
NELFE-201ENST00000375425 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.14□□□□□ -0.95
NELFE-201ENST00000375425 TMEM250H0YL14 139 aa9.14□□□□□ -0.95
NELFE-201ENST00000375425 PANO1I0J062 215 aa9.14□□□□□ -0.95
NELFE-201ENST00000375425 CNBPP62633 177 aaKnown RBP9.14□□□□□ -0.95
NELFE-201ENST00000375425 SMIM15Q7Z3B0 74 aa9.14□□□□□ -0.95
NELFE-201ENST00000375425 AKAP14Q86UN6 197 aa9.14□□□□□ -0.95
NELFE-201ENST00000375425 RPL39LQ96EH5 51 aaKnown RBP9.14□□□□□ -0.95
NELFE-201ENST00000375425 GATCO43716 136 aaKnown RBP9.13□□□□□ -0.95
NELFE-201ENST00000375425 LYPD6BQ8NI32 183 aa9.13□□□□□ -0.95
NELFE-201ENST00000375425 IGKV3OR2-268A0A0C4DH90 116 aa9.12□□□□□ -0.95
NELFE-201ENST00000375425 A8MWL6 223 aa9.12□□□□□ -0.95
NELFE-201ENST00000375425 SLPIP03973 132 aa9.12□□□□□ -0.95
NELFE-201ENST00000375425 CEBPGP53567 150 aa9.12□□□□□ -0.95
NELFE-201ENST00000375425 RPL37AP61513 92 aaKnown RBP9.12□□□□□ -0.95
NELFE-201ENST00000375425 FAM231DQ6ZW35 169 aa9.12□□□□□ -0.95
NELFE-201ENST00000375425 AP5S1Q9NUS5 200 aa9.12□□□□□ -0.95
NELFE-201ENST00000375425 TEX261Q6UWH6 196 aa9.11□□□□□ -0.95
NELFE-201ENST00000375425 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.1□□□□□ -0.95
NELFE-201ENST00000375425 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.1□□□□□ -0.95
NELFE-201ENST00000375425 IGKV2-29A2NJV5 120 aaPredicted RBP9.1□□□□□ -0.95
NELFE-201ENST00000375425 GAGE12HA6NDE8 117 aa9.1□□□□□ -0.95
NELFE-201ENST00000375425 SDHAF1A6NFY7 115 aa9.1□□□□□ -0.95
NELFE-201ENST00000375425 NCR2O95944 276 aa9.1□□□□□ -0.95
NELFE-201ENST00000375425 OXTP01178 125 aa9.1□□□□□ -0.95
NELFE-201ENST00000375425 AMMECR1LQ6DCA0 310 aa9.1□□□□□ -0.95
NELFE-201ENST00000375425 DPH3Q96FX2 82 aa9.1□□□□□ -0.95
NELFE-201ENST00000375425 IGHV3-64A0A075B6Q5 118 aa9.09□□□□□ -0.95
NELFE-201ENST00000375425 RNASEKQ6P5S7 137 aaKnown RBP9.09□□□□□ -0.95
NELFE-201ENST00000375425 CFAP161Q6P656 301 aa9.09□□□□□ -0.95
NELFE-201ENST00000375425 EIF5A2Q9GZV4 153 aaKnown RBP9.09□□□□□ -0.95
NELFE-201ENST00000375425 H7C423 109 aa9.08□□□□□ -0.96
NELFE-201ENST00000375425 APCSP02743 223 aa9.08□□□□□ -0.96
NELFE-201ENST00000375425 PMCHP20382 165 aa9.08□□□□□ -0.96
NELFE-201ENST00000375425 HNRNPA3P51991 378 aaKnown RBP9.08□□□□□ -0.96
NELFE-201ENST00000375425 CIRBPQ14011 172 aaKnown RBP9.08□□□□□ -0.96
NELFE-201ENST00000375425 CT83Q5H943 113 aa9.08□□□□□ -0.96
NELFE-201ENST00000375425 C15orf56Q8N910 161 aa9.08□□□□□ -0.96
NELFE-201ENST00000375425 FAM231BA6NCW3 169 aa9.07□□□□□ -0.96
NELFE-201ENST00000375425 I3L3M4 83 aa9.07□□□□□ -0.96
NELFE-201ENST00000375425 GAS8-AS1O95177 125 aa9.07□□□□□ -0.96
NELFE-201ENST00000375425 FGF6P10767 208 aa9.07□□□□□ -0.96
NELFE-201ENST00000375425 CHCHD10Q8WYQ3 142 aaPredicted RBP9.07□□□□□ -0.96
NELFE-201ENST00000375425 SMIM7Q9BQ49 75 aa9.07□□□□□ -0.96
NELFE-201ENST00000375425 HMCN2Q8NDA2 5059 aa9.07□□□□□ -0.96
NELFE-201ENST00000375425 TRBV6-5A0A0K0K1A5 114 aa9.06□□□□□ -0.96
NELFE-201ENST00000375425 HIGD1CA8MV81 97 aa9.06□□□□□ -0.96
NELFE-201ENST00000375425 CHTF8P0CG12 524 aa9.06□□□□□ -0.96
NELFE-201ENST00000375425 LINC01551Q86U37 167 aa9.06□□□□□ -0.96
NELFE-201ENST00000375425 TSKUQ8WUA8 353 aa9.06□□□□□ -0.96
NELFE-201ENST00000375425 BORCS7Q96B45 105 aa9.06□□□□□ -0.96
NELFE-201ENST00000375425 A0A087WYN8 130 aa9.05□□□□□ -0.96
NELFE-201ENST00000375425 A0A1B0GUT8 65 aa9.05□□□□□ -0.96
NELFE-201ENST00000375425 HIGD2BQ4VC39 106 aa9.05□□□□□ -0.96
NELFE-201ENST00000375425 ST20Q9HBF5 79 aa9.05□□□□□ -0.96
NELFE-201ENST00000375425 ZNF727A8MUV8 499 aa9.05□□□□□ -0.96
NELFE-201ENST00000375425 RPS10P46783 165 aaKnown RBP9.05□□□□□ -0.96
NELFE-201ENST00000375425 SERTAD4-AS1Q5TG53 156 aa9.05□□□□□ -0.96
NELFE-201ENST00000375425 FAM210AQ96ND0 272 aa9.05□□□□□ -0.96
NELFE-201ENST00000375425 TMEM191AQ9H0A3 160 aa9.05□□□□□ -0.96
NELFE-201ENST00000375425 NDUFS6O75380 124 aaKnown RBP9.04□□□□□ -0.96
NELFE-201ENST00000375425 TSHBP01222 138 aa9.04□□□□□ -0.96
NELFE-201ENST00000375425 ESDP10768 282 aa9.04□□□□□ -0.96
NELFE-201ENST00000375425 ZNF25P17030 456 aaPredicted RBP9.04□□□□□ -0.96
NELFE-201ENST00000375425 RAB4AP20338 218 aa9.04□□□□□ -0.96
NELFE-201ENST00000375425 COX6A2Q02221 97 aa9.04□□□□□ -0.96
NELFE-201ENST00000375425 OR5A1Q8NGJ0 315 aa9.04□□□□□ -0.96
NELFE-201ENST00000375425 SPACA4Q8TDM5 124 aa9.04□□□□□ -0.96
NELFE-201ENST00000375425 RNF185Q96GF1 192 aa9.04□□□□□ -0.96
NELFE-201ENST00000375425 TMEM101Q96IK0 257 aa9.04□□□□□ -0.96
NELFE-201ENST00000375425 BTF3L4Q96K17 158 aa9.04□□□□□ -0.96
NELFE-201ENST00000375425 OSTCQ9NRP0 149 aa9.04□□□□□ -0.96
NELFE-201ENST00000375425 SRP19P09132 144 aaKnown RBP9.03□□□□□ -0.96
NELFE-201ENST00000375425 POLR2KP53803 58 aaKnown RBP9.03□□□□□ -0.96
NELFE-201ENST00000375425 FOXI1Q12951 378 aa9.03□□□□□ -0.96
NELFE-201ENST00000375425 TMEM242Q9NWH2 141 aa9.03□□□□□ -0.96
NELFE-201ENST00000375425 LINC00959A0A1B0GUT2 108 aa9.02□□□□□ -0.97
NELFE-201ENST00000375425 XCL1P47992 114 aa9.02□□□□□ -0.97
NELFE-201ENST00000375425 AMN1Q8IY45 258 aa9.02□□□□□ -0.97
NELFE-201ENST00000375425 MRAP2Q96G30 205 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms