RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 LAMTOR2Q9Y2Q5 125 aa10.19□□□□□ -0.78
HSPG2-201ENST00000374673 RYR3Q15413 4870 aa10.19□□□□□ -0.78
HSPG2-201ENST00000374673 VCYO14598 125 aa10.18□□□□□ -0.78
HSPG2-201ENST00000374673 BTF3P20290 206 aaKnown RBP10.18□□□□□ -0.78
HSPG2-201ENST00000374673 PKIAP61925 76 aa10.18□□□□□ -0.78
HSPG2-201ENST00000374673 C10orf126Q8N4M7 172 aa10.18□□□□□ -0.78
HSPG2-201ENST00000374673 SMCO4Q9NRQ5 59 aa10.18□□□□□ -0.78
HSPG2-201ENST00000374673 IGHV3-30P01768 117 aa10.17□□□□□ -0.78
HSPG2-201ENST00000374673 IGHV3-33P01772 117 aa10.17□□□□□ -0.78
HSPG2-201ENST00000374673 APCSP02743 223 aa10.17□□□□□ -0.78
HSPG2-201ENST00000374673 IGHV3-30-3P0DP02 117 aa10.17□□□□□ -0.78
HSPG2-201ENST00000374673 IGHV3-30-5P0DP03 117 aa10.17□□□□□ -0.78
HSPG2-201ENST00000374673 AMTP48728 403 aa10.17□□□□□ -0.78
HSPG2-201ENST00000374673 CBLN2Q8IUK8 224 aa10.17□□□□□ -0.78
HSPG2-201ENST00000374673 DEFB104AQ8WTQ1 72 aa10.17□□□□□ -0.78
HSPG2-201ENST00000374673 CHCHD5Q9BSY4 110 aa10.17□□□□□ -0.78
HSPG2-201ENST00000374673 TMEM243Q9BU79 118 aa10.17□□□□□ -0.78
HSPG2-201ENST00000374673 PRSS47A8MTI9 375 aa10.16□□□□□ -0.78
HSPG2-201ENST00000374673 TSHBP01222 138 aa10.16□□□□□ -0.78
HSPG2-201ENST00000374673 Q8N3U1 123 aa10.16□□□□□ -0.78
HSPG2-201ENST00000374673 SMIM2Q9BVW6 85 aa10.16□□□□□ -0.78
HSPG2-201ENST00000374673 A0A087WX48 190 aa10.15□□□□□ -0.78
HSPG2-201ENST00000374673 C6orf223Q8N319 242 aa10.15□□□□□ -0.78
HSPG2-201ENST00000374673 KIR2DL4Q99706 377 aa10.15□□□□□ -0.78
HSPG2-201ENST00000374673 MRPL18Q9H0U6 180 aaKnown RBP10.15□□□□□ -0.78
HSPG2-201ENST00000374673 IBA57-AS1B1ANH7 110 aa10.14□□□□□ -0.79
HSPG2-201ENST00000374673 TMEM262E9PQX1 116 aa10.14□□□□□ -0.79
HSPG2-201ENST00000374673 H7C423 109 aa10.14□□□□□ -0.79
HSPG2-201ENST00000374673 ESDP10768 282 aa10.14□□□□□ -0.79
HSPG2-201ENST00000374673 GAGE6Q13070 117 aa10.14□□□□□ -0.79
HSPG2-201ENST00000374673 KIAA1644Q3SXP7 199 aa10.14□□□□□ -0.79
HSPG2-201ENST00000374673 MPV17L2Q567V2 206 aa10.14□□□□□ -0.79
HSPG2-201ENST00000374673 C1orf134Q5TEV5 83 aa10.14□□□□□ -0.79
HSPG2-201ENST00000374673 UBE2L6O14933 153 aa10.13□□□□□ -0.79
HSPG2-201ENST00000374673 TCAPO15273 167 aa10.13□□□□□ -0.79
HSPG2-201ENST00000374673 LAGE3Q14657 143 aa10.13□□□□□ -0.79
HSPG2-201ENST00000374673 MAP1LC3AQ9H492 121 aa10.13□□□□□ -0.79
HSPG2-201ENST00000374673 TRAPPC1Q9Y5R8 145 aa10.13□□□□□ -0.79
HSPG2-201ENST00000374673 A0A1B0GUV1 79 aa10.12□□□□□ -0.79
HSPG2-201ENST00000374673 FCER1GP30273 86 aa10.12□□□□□ -0.79
HSPG2-201ENST00000374673 FABP9Q0Z7S8 132 aa10.12□□□□□ -0.79
HSPG2-201ENST00000374673 RTL8CO15255 209 aa10.11□□□□□ -0.79
HSPG2-201ENST00000374673 RBX1P62877 108 aa10.11□□□□□ -0.79
HSPG2-201ENST00000374673 Q8N976 141 aa10.11□□□□□ -0.79
HSPG2-201ENST00000374673 ALKBH7Q9BT30 221 aaPredicted RBP10.11□□□□□ -0.79
HSPG2-201ENST00000374673 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.1□□□□□ -0.79
HSPG2-201ENST00000374673 LOC389332A0A1B0GUA5 103 aa10.1□□□□□ -0.79
HSPG2-201ENST00000374673 IGKV2-29A2NJV5 120 aaPredicted RBP10.1□□□□□ -0.79
HSPG2-201ENST00000374673 NFE4Q86UQ8 179 aa10.1□□□□□ -0.79
HSPG2-201ENST00000374673 Q8N8P6 123 aa10.1□□□□□ -0.79
HSPG2-201ENST00000374673 KLK12Q9UKR0 248 aa10.1□□□□□ -0.79
HSPG2-201ENST00000374673 ANGP03950 147 aaKnown RBP10.09□□□□□ -0.79
HSPG2-201ENST00000374673 Q6ZRN7 208 aaPredicted RBP10.09□□□□□ -0.79
HSPG2-201ENST00000374673 C20orf203Q8NBC4 194 aa10.09□□□□□ -0.79
HSPG2-201ENST00000374673 NXT2Q9NPJ8 142 aaKnown RBP10.09□□□□□ -0.79
HSPG2-201ENST00000374673 IGLV4-60A0A075B6I1 120 aa10.08□□□□□ -0.8
HSPG2-201ENST00000374673 TRAV8-3A0A0A6YYJ7 113 aa10.08□□□□□ -0.8
HSPG2-201ENST00000374673 K7EMI3 77 aa10.08□□□□□ -0.8
HSPG2-201ENST00000374673 FGF6P10767 208 aa10.08□□□□□ -0.8
HSPG2-201ENST00000374673 ZNF25P17030 456 aaPredicted RBP10.08□□□□□ -0.8
HSPG2-201ENST00000374673 RAB5AP20339 215 aa10.08□□□□□ -0.8
HSPG2-201ENST00000374673 S100A1P23297 94 aa10.08□□□□□ -0.8
HSPG2-201ENST00000374673 AMMECR1LQ6DCA0 310 aa10.08□□□□□ -0.8
HSPG2-201ENST00000374673 LINC00336Q6ZUF6 198 aa10.08□□□□□ -0.8
HSPG2-201ENST00000374673 COLCA2A8K830 154 aa10.07□□□□□ -0.8
HSPG2-201ENST00000374673 ATP6V1G1O75348 118 aa10.07□□□□□ -0.8
HSPG2-201ENST00000374673 SCO1O75880 301 aa10.07□□□□□ -0.8
HSPG2-201ENST00000374673 Q0VG73 95 aa10.07□□□□□ -0.8
HSPG2-201ENST00000374673 MRPL52Q86TS9 123 aaKnown RBP10.07□□□□□ -0.8
HSPG2-201ENST00000374673 TMEM18Q96B42 140 aa10.07□□□□□ -0.8
HSPG2-201ENST00000374673 PRR34Q9NV39 138 aa10.07□□□□□ -0.8
HSPG2-201ENST00000374673 CRPP02741 224 aa10.06□□□□□ -0.8
HSPG2-201ENST00000374673 IFI27P40305 119 aaPredicted RBP10.06□□□□□ -0.8
HSPG2-201ENST00000374673 SMAGPQ0VAQ4 97 aa10.06□□□□□ -0.8
HSPG2-201ENST00000374673 RNASEKQ6P5S7 137 aaKnown RBP10.06□□□□□ -0.8
HSPG2-201ENST00000374673 ENHOQ6UWT2 76 aa10.06□□□□□ -0.8
HSPG2-201ENST00000374673 UBE2WQ96B02 151 aa10.06□□□□□ -0.8
HSPG2-201ENST00000374673 Q9HAA7 133 aa10.06□□□□□ -0.8
HSPG2-201ENST00000374673 LINC00269Q8N2A0 174 aa10.05□□□□□ -0.8
HSPG2-201ENST00000374673 TMEM101Q96IK0 257 aa10.05□□□□□ -0.8
HSPG2-201ENST00000374673 UBE2D4Q9Y2X8 147 aa10.05□□□□□ -0.8
HSPG2-201ENST00000374673 CSDC2Q9Y534 153 aaKnown RBP10.05□□□□□ -0.8
HSPG2-201ENST00000374673 FRAS1Q86XX4 4008 aa10.05□□□□□ -0.8
HSPG2-201ENST00000374673 DNAH2Q9P225 4427 aa10.04□□□□□ -0.8
HSPG2-201ENST00000374673 REG3AQ06141 175 aa10.04□□□□□ -0.8
HSPG2-201ENST00000374673 MIAQ16674 131 aa10.04□□□□□ -0.8
HSPG2-201ENST00000374673 ORMDL2Q53FV1 153 aa10.04□□□□□ -0.8
HSPG2-201ENST00000374673 PRSS3P2Q8NHM4 247 aa10.04□□□□□ -0.8
HSPG2-201ENST00000374673 C18orf32Q8TCD1 76 aa10.04□□□□□ -0.8
HSPG2-201ENST00000374673 RMI2Q96E14 147 aa10.04□□□□□ -0.8
HSPG2-201ENST00000374673 TIMM21Q9BVV7 248 aa10.04□□□□□ -0.8
HSPG2-201ENST00000374673 LINC01546A6NGU7 62 aa10.03□□□□□ -0.8
HSPG2-201ENST00000374673 PRSS29PA6NIE9 313 aa10.03□□□□□ -0.8
HSPG2-201ENST00000374673 RPL39P62891 51 aaKnown RBP10.03□□□□□ -0.8
HSPG2-201ENST00000374673 OR5A1Q8NGJ0 315 aa10.03□□□□□ -0.8
HSPG2-201ENST00000374673 TM2D2Q9BX73 214 aa10.03□□□□□ -0.8
HSPG2-201ENST00000374673 COX11Q9Y6N1 276 aa10.03□□□□□ -0.8
HSPG2-201ENST00000374673 DNAH10Q8IVF4 4471 aa10.02□□□□□ -0.8
HSPG2-201ENST00000374673 DGAT2L7PQ6IED9 249 aa10.02□□□□□ -0.81
HSPG2-201ENST00000374673 CLPSL2Q6UWE3 100 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms