RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 TMEM170BQ5T4T1 132 aa12.9□□□□□ -0.34
LDLRAP1-201ENST00000374338 SLC50A1Q9BRV3 221 aa12.9□□□□□ -0.34
LDLRAP1-201ENST00000374338 RBAKDNA6NC62 111 aa12.9□□□□□ -0.34
LDLRAP1-201ENST00000374338 ZNF22P17026 224 aaPredicted RBP12.9□□□□□ -0.34
LDLRAP1-201ENST00000374338 IGHV4-4A0A075B6R2 117 aa12.89□□□□□ -0.35
LDLRAP1-201ENST00000374338 TRIAP1O43715 76 aa12.89□□□□□ -0.35
LDLRAP1-201ENST00000374338 TSHBP01222 138 aa12.89□□□□□ -0.35
LDLRAP1-201ENST00000374338 APCP25054 2843 aa12.89□□□□□ -0.35
LDLRAP1-201ENST00000374338 PRRC2AP48634 2157 aaKnown RBP12.89□□□□□ -0.35
LDLRAP1-201ENST00000374338 MUSTN1Q8IVN3 82 aa12.89□□□□□ -0.35
LDLRAP1-201ENST00000374338 J3QQQ9 107 aa12.89□□□□□ -0.35
LDLRAP1-201ENST00000374338 UQCRQO14949 82 aa12.89□□□□□ -0.35
LDLRAP1-201ENST00000374338 PAPPA-AS1Q5QFB9 102 aa12.89□□□□□ -0.35
LDLRAP1-201ENST00000374338 A0A1B0GX51 115 aa12.88□□□□□ -0.35
LDLRAP1-201ENST00000374338 NOTCH2Q04721 2471 aa12.88□□□□□ -0.35
LDLRAP1-201ENST00000374338 JMJD1CQ15652 2540 aa12.88□□□□□ -0.35
LDLRAP1-201ENST00000374338 TRBV30A0A0K0K1B3 111 aa12.88□□□□□ -0.35
LDLRAP1-201ENST00000374338 RNF223E7ERA6 249 aa12.88□□□□□ -0.35
LDLRAP1-201ENST00000374338 MSMBP08118 114 aa12.88□□□□□ -0.35
LDLRAP1-201ENST00000374338 LINC00526Q96FQ7 95 aa12.88□□□□□ -0.35
LDLRAP1-201ENST00000374338 OPRPNQ99935 248 aaPredicted RBP12.88□□□□□ -0.35
LDLRAP1-201ENST00000374338 RHPN1-AS1Q9BWJ2 59 aa12.88□□□□□ -0.35
LDLRAP1-201ENST00000374338 S100A4P26447 101 aaKnown RBP12.87□□□□□ -0.35
LDLRAP1-201ENST00000374338 DEFB121Q5J5C9 76 aa12.87□□□□□ -0.35
LDLRAP1-201ENST00000374338 JPT2Q9H910 190 aa12.87□□□□□ -0.35
LDLRAP1-201ENST00000374338 IMUPQ9GZP8 106 aa12.86□□□□□ -0.35
LDLRAP1-201ENST00000374338 H3BT86 120 aa12.86□□□□□ -0.35
LDLRAP1-201ENST00000374338 LGALS3P17931 250 aaKnown RBP12.86□□□□□ -0.35
LDLRAP1-201ENST00000374338 EDA2RQ9HAV5 297 aa12.86□□□□□ -0.35
LDLRAP1-201ENST00000374338 TP53TG1Q9Y2A0 90 aa12.86□□□□□ -0.35
LDLRAP1-201ENST00000374338 ZNF580Q9UK33 172 aa12.85□□□□□ -0.35
LDLRAP1-201ENST00000374338 DEFB112Q30KQ8 113 aa12.85□□□□□ -0.35
LDLRAP1-201ENST00000374338 ZNRF2Q8NHG8 242 aa12.85□□□□□ -0.35
LDLRAP1-201ENST00000374338 NACAE9PAV3 2078 aa12.84□□□□□ -0.35
LDLRAP1-201ENST00000374338 C2CD3Q4AC94 2353 aa12.84□□□□□ -0.35
LDLRAP1-201ENST00000374338 TRAV12-2A0A075B6T6 113 aa12.84□□□□□ -0.35
LDLRAP1-201ENST00000374338 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.84□□□□□ -0.35
LDLRAP1-201ENST00000374338 ADARB2-AS1A8MUL3 147 aa12.84□□□□□ -0.35
LDLRAP1-201ENST00000374338 C19orf54Q5BKX5 351 aa12.84□□□□□ -0.35
LDLRAP1-201ENST00000374338 U3KQE9 123 aa12.84□□□□□ -0.35
LDLRAP1-201ENST00000374338 FLNAP21333 2647 aaKnown RBP12.83□□□□□ -0.35
LDLRAP1-201ENST00000374338 KRTAP10-9P60411 292 aa12.83□□□□□ -0.36
LDLRAP1-201ENST00000374338 PHLDA3Q9Y5J5 127 aa12.83□□□□□ -0.36
LDLRAP1-201ENST00000374338 IGIPA6NJ69 53 aa12.83□□□□□ -0.36
LDLRAP1-201ENST00000374338 ZFAND2AQ8N6M9 145 aa12.83□□□□□ -0.36
LDLRAP1-201ENST00000374338 A6NDX4 124 aa12.82□□□□□ -0.36
LDLRAP1-201ENST00000374338 IGHG2P01859 326 aa12.82□□□□□ -0.36
LDLRAP1-201ENST00000374338 OR13C6PQ8NH95 151 aa12.82□□□□□ -0.36
LDLRAP1-201ENST00000374338 BBC3Q96PG8 261 aaPredicted RBP12.82□□□□□ -0.36
LDLRAP1-201ENST00000374338 ITPR3Q14573 2671 aa12.82□□□□□ -0.36
LDLRAP1-201ENST00000374338 RPS28P62857 69 aaKnown RBP12.82□□□□□ -0.36
LDLRAP1-201ENST00000374338 TMEM223A0PJW6 202 aa12.82□□□□□ -0.36
LDLRAP1-201ENST00000374338 FAM223BA6NKX1 122 aa12.82□□□□□ -0.36
LDLRAP1-201ENST00000374338 HTN1P15515 57 aa12.82□□□□□ -0.36
LDLRAP1-201ENST00000374338 C9orf47Q6ZRZ4 202 aa12.82□□□□□ -0.36
LDLRAP1-201ENST00000374338 FAM223AQ8IWN6 122 aa12.82□□□□□ -0.36
LDLRAP1-201ENST00000374338 PRM2P04554 102 aa12.81□□□□□ -0.36
LDLRAP1-201ENST00000374338 Q6ZSV7 163 aa12.81□□□□□ -0.36
LDLRAP1-201ENST00000374338 A0A087WWL8 130 aa12.81□□□□□ -0.36
LDLRAP1-201ENST00000374338 TRAV12-3A0A0B4J271 114 aa12.8□□□□□ -0.36
LDLRAP1-201ENST00000374338 ICOSQ9Y6W8 199 aa12.8□□□□□ -0.36
LDLRAP1-201ENST00000374338 NPC2P61916 151 aa12.8□□□□□ -0.36
LDLRAP1-201ENST00000374338 DEFB136Q30KP8 78 aa12.8□□□□□ -0.36
LDLRAP1-201ENST00000374338 CLEC2BQ92478 149 aa12.8□□□□□ -0.36
LDLRAP1-201ENST00000374338 UBR5O95071 2799 aaPredicted RBP12.8□□□□□ -0.36
LDLRAP1-201ENST00000374338 DPH3P1Q9H4G8 78 aa12.79□□□□□ -0.36
LDLRAP1-201ENST00000374338 TENM4Q6N022 2769 aa12.79□□□□□ -0.36
LDLRAP1-201ENST00000374338 NDUFA4O00483 81 aa12.79□□□□□ -0.36
LDLRAP1-201ENST00000374338 GAGE2AQ6NT46 116 aa12.79□□□□□ -0.36
LDLRAP1-201ENST00000374338 SMCR5Q8TEV8 140 aa12.79□□□□□ -0.36
LDLRAP1-201ENST00000374338 ZNF876PQ49A33 203 aa12.78□□□□□ -0.36
LDLRAP1-201ENST00000374338 C18orf65Q6ZTR6 163 aa12.78□□□□□ -0.36
LDLRAP1-201ENST00000374338 ITPR2Q14571 2701 aa12.78□□□□□ -0.36
LDLRAP1-201ENST00000374338 C9orf139Q6ZV77 190 aa12.78□□□□□ -0.36
LDLRAP1-201ENST00000374338 SOCS3O14543 225 aa12.78□□□□□ -0.36
LDLRAP1-201ENST00000374338 COX7CP15954 63 aa12.78□□□□□ -0.36
LDLRAP1-201ENST00000374338 F5H697 171 aa12.77□□□□□ -0.36
LDLRAP1-201ENST00000374338 LEPROTO15243 131 aa12.77□□□□□ -0.36
LDLRAP1-201ENST00000374338 SYNJ2BPP57105 145 aa12.77□□□□□ -0.36
LDLRAP1-201ENST00000374338 FAM74A4Q5TZK3 123 aa12.77□□□□□ -0.36
LDLRAP1-201ENST00000374338 LINC00477Q96M19 166 aa12.77□□□□□ -0.36
LDLRAP1-201ENST00000374338 SPANXDQ9BXN6 97 aa12.77□□□□□ -0.36
LDLRAP1-201ENST00000374338 ZNF256Q9Y2P7 627 aaPredicted RBP12.77□□□□□ -0.36
LDLRAP1-201ENST00000374338 B4DSR2 109 aa12.77□□□□□ -0.37
LDLRAP1-201ENST00000374338 KLK9Q9UKQ9 250 aa12.77□□□□□ -0.37
LDLRAP1-201ENST00000374338 HIST2H2BCQ6DN03 193 aa12.76□□□□□ -0.37
LDLRAP1-201ENST00000374338 C2orf48Q96LS8 159 aa12.76□□□□□ -0.37
LDLRAP1-201ENST00000374338 LST1O00453 97 aa12.75□□□□□ -0.37
LDLRAP1-201ENST00000374338 ACYP1P07311 99 aa12.75□□□□□ -0.37
LDLRAP1-201ENST00000374338 COX6CP09669 75 aa12.75□□□□□ -0.37
LDLRAP1-201ENST00000374338 TMEM141Q96I45 108 aa12.75□□□□□ -0.37
LDLRAP1-201ENST00000374338 DAZ1Q9NQZ3 744 aaKnown RBP12.75□□□□□ -0.37
LDLRAP1-201ENST00000374338 ATP5G1P05496 136 aa12.75□□□□□ -0.37
LDLRAP1-201ENST00000374338 CRYGAP11844 174 aa12.75□□□□□ -0.37
LDLRAP1-201ENST00000374338 LINC00643Q86TS7 51 aa12.75□□□□□ -0.37
LDLRAP1-201ENST00000374338 PRSS2P07478 247 aa12.74□□□□□ -0.37
LDLRAP1-201ENST00000374338 C11orf44Q8N8P7 122 aa12.74□□□□□ -0.37
LDLRAP1-201ENST00000374338 TIMM17AQ99595 171 aa12.74□□□□□ -0.37
LDLRAP1-201ENST00000374338 TRAV21A0A0B4J279 112 aa12.74□□□□□ -0.37
LDLRAP1-201ENST00000374338 RNASE3P12724 160 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms