RNA–Protein interactions for RNA: ENST00000373891.2

CHPF-202, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 1,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-202ENST00000373891 NUDT10Q8NFP7 164 aa12.88□□□□□ -0.35
CHPF-202ENST00000373891 OCC1Q8TAD7 63 aa12.88□□□□□ -0.35
CHPF-202ENST00000373891 NUDT11Q96G61 164 aa12.88□□□□□ -0.35
CHPF-202ENST00000373891 RPP21Q9H633 154 aaKnown RBP12.88□□□□□ -0.35
CHPF-202ENST00000373891 TRBV25-1A0A075B6N4 114 aa12.87□□□□□ -0.35
CHPF-202ENST00000373891 TRGC1P0CF51 173 aa12.87□□□□□ -0.35
CHPF-202ENST00000373891 FAM210AQ96ND0 272 aa12.87□□□□□ -0.35
CHPF-202ENST00000373891 H7C1H1 209 aa12.86□□□□□ -0.35
CHPF-202ENST00000373891 REG3AQ06141 175 aa12.86□□□□□ -0.35
CHPF-202ENST00000373891 RNASE7Q9H1E1 156 aaKnown RBP12.86□□□□□ -0.35
CHPF-202ENST00000373891 A0A087WYN8 130 aa12.85□□□□□ -0.35
CHPF-202ENST00000373891 K7EN84 100 aa12.85□□□□□ -0.35
CHPF-202ENST00000373891 CIRBPQ14011 172 aaKnown RBP12.85□□□□□ -0.35
CHPF-202ENST00000373891 TMEM97Q5BJF2 176 aa12.85□□□□□ -0.35
CHPF-202ENST00000373891 WDR73Q6P4I2 378 aa12.85□□□□□ -0.35
CHPF-202ENST00000373891 LYZL1Q6UWQ5 148 aa12.85□□□□□ -0.35
CHPF-202ENST00000373891 CLRN3Q8NCR9 226 aa12.85□□□□□ -0.35
CHPF-202ENST00000373891 RNF213Q63HN8 5207 aa12.85□□□□□ -0.35
CHPF-202ENST00000373891 MGPP08493 103 aa12.84□□□□□ -0.35
CHPF-202ENST00000373891 ODF1Q14990 250 aa12.84□□□□□ -0.35
CHPF-202ENST00000373891 SMIM7Q9BQ49 75 aa12.84□□□□□ -0.35
CHPF-202ENST00000373891 KIF25-AS1Q9Y6Z4 181 aa12.84□□□□□ -0.35
CHPF-202ENST00000373891 IGHV3-64A0A075B6Q5 118 aa12.83□□□□□ -0.36
CHPF-202ENST00000373891 SLPIP03973 132 aa12.83□□□□□ -0.36
CHPF-202ENST00000373891 CTRLP40313 264 aa12.83□□□□□ -0.36
CHPF-202ENST00000373891 CNBPP62633 177 aaKnown RBP12.83□□□□□ -0.36
CHPF-202ENST00000373891 TNXBP22105 4242 aa12.82□□□□□ -0.36
CHPF-202ENST00000373891 IGHV1-24A0A0C4DH33 117 aa12.82□□□□□ -0.36
CHPF-202ENST00000373891 GATCO43716 136 aaKnown RBP12.82□□□□□ -0.36
CHPF-202ENST00000373891 NTF3P20783 257 aa12.82□□□□□ -0.36
CHPF-202ENST00000373891 TEX261Q6UWH6 196 aa12.82□□□□□ -0.36
CHPF-202ENST00000373891 FAM231DQ6ZW35 169 aa12.82□□□□□ -0.36
CHPF-202ENST00000373891 C20orf203Q8NBC4 194 aa12.82□□□□□ -0.36
CHPF-202ENST00000373891 GFRA4Q9GZZ7 299 aa12.82□□□□□ -0.36
CHPF-202ENST00000373891 AP5S1Q9NUS5 200 aa12.82□□□□□ -0.36
CHPF-202ENST00000373891 IGLV4-60A0A075B6I1 120 aa12.81□□□□□ -0.36
CHPF-202ENST00000373891 ZNF727A8MUV8 499 aa12.81□□□□□ -0.36
CHPF-202ENST00000373891 A8MWL6 223 aa12.81□□□□□ -0.36
CHPF-202ENST00000373891 PHOX2AO14813 284 aa12.81□□□□□ -0.36
CHPF-202ENST00000373891 TWIST1Q15672 202 aa12.81□□□□□ -0.36
CHPF-202ENST00000373891 IQCJQ1A5X6 159 aa12.81□□□□□ -0.36
CHPF-202ENST00000373891 SPACA4Q8TDM5 124 aa12.81□□□□□ -0.36
CHPF-202ENST00000373891 CNFNQ9BYD5 112 aa12.81□□□□□ -0.36
CHPF-202ENST00000373891 DPH3P1Q9H4G8 78 aa12.81□□□□□ -0.36
CHPF-202ENST00000373891 SMIM15Q7Z3B0 74 aa12.8□□□□□ -0.36
CHPF-202ENST00000373891 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.79□□□□□ -0.36
CHPF-202ENST00000373891 CT83Q5H943 113 aa12.79□□□□□ -0.36
CHPF-202ENST00000373891 M0QY20 66 aa12.78□□□□□ -0.36
CHPF-202ENST00000373891 SRP19P09132 144 aaKnown RBP12.78□□□□□ -0.36
CHPF-202ENST00000373891 FAM74A3Q4VXF1 159 aa12.78□□□□□ -0.36
CHPF-202ENST00000373891 SUMO4Q6EEV6 95 aa12.78□□□□□ -0.36
CHPF-202ENST00000373891 LINC01551Q86U37 167 aa12.78□□□□□ -0.36
CHPF-202ENST00000373891 BORCS7Q96B45 105 aa12.78□□□□□ -0.36
CHPF-202ENST00000373891 PEA15Q15121 130 aa12.77□□□□□ -0.37
CHPF-202ENST00000373891 RASL11AQ6T310 242 aa12.77□□□□□ -0.37
CHPF-202ENST00000373891 RNF185Q96GF1 192 aa12.77□□□□□ -0.37
CHPF-202ENST00000373891 TMEM243Q9BU79 118 aa12.77□□□□□ -0.37
CHPF-202ENST00000373891 SMDT1Q9H4I9 107 aa12.77□□□□□ -0.37
CHPF-202ENST00000373891 TRAV8-4A0A0B4J246 113 aa12.76□□□□□ -0.37
CHPF-202ENST00000373891 GTSF1Q8WW33 167 aa12.76□□□□□ -0.37
CHPF-202ENST00000373891 IGKV2-24A0A0C4DH68 120 aa12.75□□□□□ -0.37
CHPF-202ENST00000373891 IGKV3OR2-268A0A0C4DH90 116 aa12.75□□□□□ -0.37
CHPF-202ENST00000373891 COX6A2Q02221 97 aa12.75□□□□□ -0.37
CHPF-202ENST00000373891 C7orf33Q8WU49 177 aa12.75□□□□□ -0.37
CHPF-202ENST00000373891 PLAC8Q9NZF1 115 aa12.75□□□□□ -0.37
CHPF-202ENST00000373891 TMEM241Q24JQ0 296 aa12.74□□□□□ -0.37
CHPF-202ENST00000373891 MAJINQ3KP22 176 aa12.74□□□□□ -0.37
CHPF-202ENST00000373891 HIGD2BQ4VC39 106 aa12.74□□□□□ -0.37
CHPF-202ENST00000373891 C15orf56Q8N910 161 aa12.74□□□□□ -0.37
CHPF-202ENST00000373891 TSKUQ8WUA8 353 aa12.74□□□□□ -0.37
CHPF-202ENST00000373891 NIT2Q9NQR4 276 aa12.74□□□□□ -0.37
CHPF-202ENST00000373891 OSTCQ9NRP0 149 aa12.74□□□□□ -0.37
CHPF-202ENST00000373891 FAM231BA6NCW3 169 aa12.73□□□□□ -0.37
CHPF-202ENST00000373891 FOXA3P55318 350 aaPredicted RBP12.73□□□□□ -0.37
CHPF-202ENST00000373891 PGLYRP4Q96LB8 373 aa12.73□□□□□ -0.37
CHPF-202ENST00000373891 A0A1B0GUV1 79 aa12.72□□□□□ -0.37
CHPF-202ENST00000373891 GAGE12HA6NDE8 117 aa12.72□□□□□ -0.37
CHPF-202ENST00000373891 UBE2L6O14933 153 aa12.72□□□□□ -0.37
CHPF-202ENST00000373891 PRSS3P2Q8NHM4 247 aa12.72□□□□□ -0.37
CHPF-202ENST00000373891 LINC01600Q96MT4 127 aa12.71□□□□□ -0.37
CHPF-202ENST00000373891 NAT8Q9UHE5 227 aa12.71□□□□□ -0.37
CHPF-202ENST00000373891 HIGD1CA8MV81 97 aa12.7□□□□□ -0.38
CHPF-202ENST00000373891 PRR3P79522 188 aaKnown RBP12.7□□□□□ -0.38
CHPF-202ENST00000373891 A0A1B0GUT8 65 aa12.69□□□□□ -0.38
CHPF-202ENST00000373891 RPS10P46783 165 aaKnown RBP12.69□□□□□ -0.38
CHPF-202ENST00000373891 AMTP48728 403 aa12.69□□□□□ -0.38
CHPF-202ENST00000373891 RAB14P61106 215 aa12.69□□□□□ -0.38
CHPF-202ENST00000373891 ADIRFQ15847 76 aa12.69□□□□□ -0.38
CHPF-202ENST00000373891 STPG4Q8N801 248 aa12.69□□□□□ -0.38
CHPF-202ENST00000373891 ISOC2Q96AB3 205 aa12.69□□□□□ -0.38
CHPF-202ENST00000373891 RPL23P62829 140 aaKnown RBP12.68□□□□□ -0.38
CHPF-202ENST00000373891 COTL1Q14019 142 aa12.68□□□□□ -0.38
CHPF-202ENST00000373891 GATD1Q8NB37 220 aa12.67□□□□□ -0.38
CHPF-202ENST00000373891 TRAV26-2A0A0B4J265 109 aa12.66□□□□□ -0.38
CHPF-202ENST00000373891 C9JQL5 133 aa12.66□□□□□ -0.38
CHPF-202ENST00000373891 SRSF3P84103 164 aaKnown RBP12.66□□□□□ -0.38
CHPF-202ENST00000373891 CFAP161Q6P656 301 aa12.66□□□□□ -0.38
CHPF-202ENST00000373891 NAT8BQ9UHF3 227 aa12.66□□□□□ -0.38
CHPF-202ENST00000373891 V9GYV3 84 aa12.66□□□□□ -0.38
CHPF-202ENST00000373891 RIGQ13278 110 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms