RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 LY6G6DO95868 133 aa10.15□□□□□ -0.78
RAPGEF1-201ENST00000372189 GYPEP15421 78 aa10.15□□□□□ -0.78
RAPGEF1-201ENST00000372189 PTPRSQ13332 1948 aa10.15□□□□□ -0.78
RAPGEF1-201ENST00000372189 FAM208BQ5VWN6 2430 aa10.15□□□□□ -0.78
RAPGEF1-201ENST00000372189 FRMD6-AS1P0C7T7 363 aa10.15□□□□□ -0.78
RAPGEF1-201ENST00000372189 CD164L2Q6UWJ8 174 aa10.15□□□□□ -0.78
RAPGEF1-201ENST00000372189 Q9HAA7 133 aa10.15□□□□□ -0.78
RAPGEF1-201ENST00000372189 C9orf47Q6ZRZ4 202 aa10.15□□□□□ -0.79
RAPGEF1-201ENST00000372189 COX7B2Q8TF08 81 aa10.15□□□□□ -0.79
RAPGEF1-201ENST00000372189 F8W735 103 aaPredicted RBP10.14□□□□□ -0.79
RAPGEF1-201ENST00000372189 ENHOQ6UWT2 76 aa10.14□□□□□ -0.79
RAPGEF1-201ENST00000372189 KLK5Q9Y337 293 aaPredicted RBP10.14□□□□□ -0.79
RAPGEF1-201ENST00000372189 C19orf71A6NCJ1 209 aa10.14□□□□□ -0.79
RAPGEF1-201ENST00000372189 K7EQD1 137 aa10.14□□□□□ -0.79
RAPGEF1-201ENST00000372189 DEFB135Q30KP9 77 aa10.14□□□□□ -0.79
RAPGEF1-201ENST00000372189 BDP1A6H8Y1 2624 aa10.14□□□□□ -0.79
RAPGEF1-201ENST00000372189 DEFB105AQ8NG35 78 aa10.14□□□□□ -0.79
RAPGEF1-201ENST00000372189 MED13Q9UHV7 2174 aa10.14□□□□□ -0.79
RAPGEF1-201ENST00000372189 BPY2O14599 106 aa10.13□□□□□ -0.79
RAPGEF1-201ENST00000372189 DAZ2Q13117 558 aaKnown RBP10.13□□□□□ -0.79
RAPGEF1-201ENST00000372189 FAM19A3Q7Z5A8 133 aa10.13□□□□□ -0.79
RAPGEF1-201ENST00000372189 SPATA12Q7Z6I5 190 aa10.13□□□□□ -0.79
RAPGEF1-201ENST00000372189 DAZ4Q86SG3 579 aaKnown RBP10.13□□□□□ -0.79
RAPGEF1-201ENST00000372189 DAZ3Q9NR90 486 aaKnown RBP10.13□□□□□ -0.79
RAPGEF1-201ENST00000372189 C10orf142B7Z368 130 aa10.13□□□□□ -0.79
RAPGEF1-201ENST00000372189 OPRPNQ99935 248 aaPredicted RBP10.13□□□□□ -0.79
RAPGEF1-201ENST00000372189 PTPRQQ9UMZ3 2332 aa10.13□□□□□ -0.79
RAPGEF1-201ENST00000372189 LINC00574Q9H8X3 128 aa10.12□□□□□ -0.79
RAPGEF1-201ENST00000372189 NUP210LQ5VU65 1888 aa10.12□□□□□ -0.79
RAPGEF1-201ENST00000372189 E7EUB6 86 aa10.12□□□□□ -0.79
RAPGEF1-201ENST00000372189 PCDH15Q96QU1 1955 aa10.12□□□□□ -0.79
RAPGEF1-201ENST00000372189 RPL39P62891 51 aaKnown RBP10.12□□□□□ -0.79
RAPGEF1-201ENST00000372189 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.12□□□□□ -0.791e-6■■■□□ 19.2
RAPGEF1-201ENST00000372189 C5orf38Q86SI9 138 aa10.12□□□□□ -0.79
RAPGEF1-201ENST00000372189 WFDC10AQ9H1F0 79 aa10.12□□□□□ -0.79
RAPGEF1-201ENST00000372189 SPINT4Q6UDR6 99 aa10.12□□□□□ -0.79
RAPGEF1-201ENST00000372189 A0A1B0GXF2 115 aa10.11□□□□□ -0.79
RAPGEF1-201ENST00000372189 PRAC2D3DTV9 90 aa10.11□□□□□ -0.79
RAPGEF1-201ENST00000372189 MIFP14174 115 aa10.11□□□□□ -0.79
RAPGEF1-201ENST00000372189 ARFGEF3Q5TH69 2177 aa10.11□□□□□ -0.79
RAPGEF1-201ENST00000372189 UNQ9165/PRO28630Q6UXU0 137 aa10.11□□□□□ -0.79
RAPGEF1-201ENST00000372189 SCXQ7RTU7 201 aa10.11□□□□□ -0.79
RAPGEF1-201ENST00000372189 ALPK3Q96L96 1907 aa10.1□□□□□ -0.79
RAPGEF1-201ENST00000372189 DYSFO75923 2080 aa10.1□□□□□ -0.79
RAPGEF1-201ENST00000372189 IL17DQ8TAD2 202 aa10.1□□□□□ -0.79
RAPGEF1-201ENST00000372189 Q8N976 141 aa10.1□□□□□ -0.79
RAPGEF1-201ENST00000372189 IGHV3-30P01768 117 aa10.09□□□□□ -0.79
RAPGEF1-201ENST00000372189 IGHV3-33P01772 117 aa10.09□□□□□ -0.79
RAPGEF1-201ENST00000372189 IGHV3-30-3P0DP02 117 aa10.09□□□□□ -0.79
RAPGEF1-201ENST00000372189 IGHV3-30-5P0DP03 117 aa10.09□□□□□ -0.79
RAPGEF1-201ENST00000372189 EP400Q96L91 3159 aa10.09□□□□□ -0.79
RAPGEF1-201ENST00000372189 DEFB4AO15263 64 aa10.09□□□□□ -0.79
RAPGEF1-201ENST00000372189 Q8N9L7 120 aa10.09□□□□□ -0.79
RAPGEF1-201ENST00000372189 LRCOL1A6NCL2 159 aa10.09□□□□□ -0.79
RAPGEF1-201ENST00000372189 LINC01548A6NM66 108 aa10.08□□□□□ -0.8
RAPGEF1-201ENST00000372189 IGF1P05019 195 aa10.08□□□□□ -0.8
RAPGEF1-201ENST00000372189 HHLA3Q9XRX5 114 aa10.08□□□□□ -0.8
RAPGEF1-201ENST00000372189 P0C879 139 aa10.08□□□□□ -0.8
RAPGEF1-201ENST00000372189 SPAG11AQ6PDA7 123 aa10.08□□□□□ -0.8
RAPGEF1-201ENST00000372189 ZNF503Q96F45 646 aa10.08□□□□□ -0.8
RAPGEF1-201ENST00000372189 TEX49A0A1B0GTD5 131 aa10.08□□□□□ -0.8
RAPGEF1-201ENST00000372189 MAP6D1Q9H9H5 199 aa10.08□□□□□ -0.8
RAPGEF1-201ENST00000372189 MRPL36Q9P0J6 103 aaKnown RBP10.08□□□□□ -0.8
RAPGEF1-201ENST00000372189 CCDC140Q96MF4 163 aa10.07□□□□□ -0.8
RAPGEF1-201ENST00000372189 C4orf26Q17RF5 130 aa10.07□□□□□ -0.8
RAPGEF1-201ENST00000372189 IGHV1-58A0A0C4DH39 117 aa10.07□□□□□ -0.8
RAPGEF1-201ENST00000372189 IGLV2-8P01709 118 aa10.07□□□□□ -0.8
RAPGEF1-201ENST00000372189 XGP55808 180 aa10.07□□□□□ -0.8
RAPGEF1-201ENST00000372189 DOPEY2Q9Y3R5 2298 aa10.07□□□□□ -0.8
RAPGEF1-201ENST00000372189 PLAC8L1A1L4L8 177 aa10.07□□□□□ -0.8
RAPGEF1-201ENST00000372189 Q6ZSV7 163 aa10.07□□□□□ -0.8
RAPGEF1-201ENST00000372189 EML6Q6ZMW3 1958 aa10.07□□□□□ -0.8
RAPGEF1-201ENST00000372189 TNRC6AQ8NDV7 1962 aaKnown RBP10.07□□□□□ -0.8
RAPGEF1-201ENST00000372189 H3BS24 57 aa10.06□□□□□ -0.8
RAPGEF1-201ENST00000372189 EBI3Q14213 229 aa10.06□□□□□ -0.8
RAPGEF1-201ENST00000372189 ABCA1O95477 2261 aa10.05□□□□□ -0.8
RAPGEF1-201ENST00000372189 C8orf87E5RJ46 101 aa10.05□□□□□ -0.8
RAPGEF1-201ENST00000372189 LECT2O14960 151 aa10.05□□□□□ -0.8
RAPGEF1-201ENST00000372189 PIK3CD-AS1Q5SR53 167 aa10.05□□□□□ -0.8
RAPGEF1-201ENST00000372189 OTOGLQ3ZCN5 2332 aa10.05□□□□□ -0.8
RAPGEF1-201ENST00000372189 A0A0J9YX75 114 aa10.05□□□□□ -0.8
RAPGEF1-201ENST00000372189 H0Y9J4 135 aa10.05□□□□□ -0.8
RAPGEF1-201ENST00000372189 TRBV7-3A0A075B6L6 115 aa10.04□□□□□ -0.8
RAPGEF1-201ENST00000372189 IGHV4-4A0A075B6R2 117 aa10.04□□□□□ -0.8
RAPGEF1-201ENST00000372189 ETDCA0A1B0GVM5 59 aa10.04□□□□□ -0.8
RAPGEF1-201ENST00000372189 GDF5OSQ5U4N7 250 aa10.04□□□□□ -0.8
RAPGEF1-201ENST00000372189 IGKV1D-37A0A075B6S9 117 aa10.04□□□□□ -0.8
RAPGEF1-201ENST00000372189 TMEM263Q8WUH6 116 aaKnown RBP10.04□□□□□ -0.8
RAPGEF1-201ENST00000372189 CELA1Q9UNI1 258 aa10.04□□□□□ -0.8
RAPGEF1-201ENST00000372189 KIR2DL5BQ8NHK3 375 aa10.04□□□□□ -0.8
RAPGEF1-201ENST00000372189 DEFB1P60022 68 aa10.03□□□□□ -0.8
RAPGEF1-201ENST00000372189 CAMK2N2Q96S95 79 aa10.03□□□□□ -0.8
RAPGEF1-201ENST00000372189 CUL9Q8IWT3 2517 aa10.03□□□□□ -0.8
RAPGEF1-201ENST00000372189 C20orf203Q8NBC4 194 aa10.03□□□□□ -0.8
RAPGEF1-201ENST00000372189 LY6LH3BQJ8 138 aa10.03□□□□□ -0.8
RAPGEF1-201ENST00000372189 C11orf45Q8TAV5 145 aa10.03□□□□□ -0.8
RAPGEF1-201ENST00000372189 MIAQ16674 131 aa10.03□□□□□ -0.8
RAPGEF1-201ENST00000372189 NRACQ8N912 160 aa10.03□□□□□ -0.8
RAPGEF1-201ENST00000372189 CDSNQ15517 529 aa10.02□□□□□ -0.8
RAPGEF1-201ENST00000372189 NFE4Q86UQ8 179 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms