RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 ANXA2RQ3ZCQ2 193 aa7.57□□□□□ -1.2
COL5A1-202ENST00000371820 Q6ZVH6 145 aa7.57□□□□□ -1.2
COL5A1-202ENST00000371820 WFDC3Q8IUB2 231 aa7.57□□□□□ -1.2
COL5A1-202ENST00000371820 NEXN-AS1Q8NBZ9 246 aa7.57□□□□□ -1.2
COL5A1-202ENST00000371820 HIST1H4GQ99525 98 aa7.57□□□□□ -1.2
COL5A1-202ENST00000371820 OVOL2Q9BRP0 275 aa7.57□□□□□ -1.2
COL5A1-202ENST00000371820 MAP6D1Q9H9H5 199 aa7.57□□□□□ -1.2
COL5A1-202ENST00000371820 KLLNB2CW77 178 aa7.56□□□□□ -1.2
COL5A1-202ENST00000371820 RPL35AP18077 110 aaKnown RBP7.56□□□□□ -1.2
COL5A1-202ENST00000371820 FXYD7P58549 80 aa7.56□□□□□ -1.2
COL5A1-202ENST00000371820 C2orf66Q6UXQ4 117 aa7.56□□□□□ -1.2
COL5A1-202ENST00000371820 RASL10AQ92737 203 aa7.56□□□□□ -1.2
COL5A1-202ENST00000371820 TIMM17AQ99595 171 aa7.56□□□□□ -1.2
COL5A1-202ENST00000371820 GATA1P15976 413 aaPredicted RBP7.55□□□□□ -1.2
COL5A1-202ENST00000371820 DEFB131AP59861 70 aa7.55□□□□□ -1.2
COL5A1-202ENST00000371820 PMVKQ15126 192 aa7.55□□□□□ -1.2
COL5A1-202ENST00000371820 RHOHQ15669 191 aa7.55□□□□□ -1.2
COL5A1-202ENST00000371820 DEFB135Q30KP9 77 aa7.55□□□□□ -1.2
COL5A1-202ENST00000371820 PIK3CD-AS1Q5SR53 167 aa7.55□□□□□ -1.2
COL5A1-202ENST00000371820 FOXI2Q6ZQN5 318 aa7.55□□□□□ -1.2
COL5A1-202ENST00000371820 NEGR1Q7Z3B1 354 aa7.55□□□□□ -1.2
COL5A1-202ENST00000371820 RNF183Q96D59 192 aa7.55□□□□□ -1.2
COL5A1-202ENST00000371820 C20orf173Q96LM9 149 aa7.55□□□□□ -1.2
COL5A1-202ENST00000371820 CSTL1Q9H114 145 aa7.55□□□□□ -1.2
COL5A1-202ENST00000371820 VCX2Q9H322 139 aa7.55□□□□□ -1.2
COL5A1-202ENST00000371820 A0A1B0GWB2 263 aa7.54□□□□□ -1.2
COL5A1-202ENST00000371820 K7EQG2 157 aa7.54□□□□□ -1.2
COL5A1-202ENST00000371820 MGPP08493 103 aa7.54□□□□□ -1.2
COL5A1-202ENST00000371820 CRYBA4P53673 196 aa7.54□□□□□ -1.2
COL5A1-202ENST00000371820 POLR2KP53803 58 aaKnown RBP7.54□□□□□ -1.2
COL5A1-202ENST00000371820 RNF151Q2KHN1 245 aa7.54□□□□□ -1.2
COL5A1-202ENST00000371820 STHQ8IWL8 128 aa7.54□□□□□ -1.2
COL5A1-202ENST00000371820 C14orf178Q8N769 122 aaPredicted RBP7.54□□□□□ -1.2
COL5A1-202ENST00000371820 RAB37Q96AX2 223 aa7.54□□□□□ -1.2
COL5A1-202ENST00000371820 TRGV11A0A075B6L2 103 aa7.53□□□□□ -1.2
COL5A1-202ENST00000371820 RNASE3P12724 160 aaKnown RBP7.53□□□□□ -1.2
COL5A1-202ENST00000371820 C12orf74Q32Q52 190 aa7.53□□□□□ -1.2
COL5A1-202ENST00000371820 MORN3Q6PF18 240 aaPredicted RBP7.53□□□□□ -1.2
COL5A1-202ENST00000371820 TRPT1Q86TN4 253 aaKnown RBP7.53□□□□□ -1.2
COL5A1-202ENST00000371820 IGKV2D-26A0A0A0MRZ7 120 aa7.52□□□□□ -1.21
COL5A1-202ENST00000371820 TRBV27A0A0K0K1C4 114 aa7.52□□□□□ -1.21
COL5A1-202ENST00000371820 PRSS29PA6NIE9 313 aa7.52□□□□□ -1.21
COL5A1-202ENST00000371820 IGLL5B9A064 214 aa7.52□□□□□ -1.21
COL5A1-202ENST00000371820 GAS8-AS1O95177 125 aa7.52□□□□□ -1.21
COL5A1-202ENST00000371820 BAALCQ8WXS3 180 aa7.52□□□□□ -1.21
COL5A1-202ENST00000371820 PTH2Q96A98 100 aa7.52□□□□□ -1.21
COL5A1-202ENST00000371820 ZNF479Q96JC4 524 aa7.52□□□□□ -1.21
COL5A1-202ENST00000371820 NHP2Q9NX24 153 aaKnown RBP7.52□□□□□ -1.21
COL5A1-202ENST00000371820 KIF25-AS1Q9Y6Z4 181 aa7.52□□□□□ -1.21
COL5A1-202ENST00000371820 TRAV26-2A0A0B4J265 109 aa7.51□□□□□ -1.21
COL5A1-202ENST00000371820 A0A0J9YWU9 116 aa7.51□□□□□ -1.21
COL5A1-202ENST00000371820 NUPR2A6NF83 97 aa7.51□□□□□ -1.21
COL5A1-202ENST00000371820 C11orf86A6NJI1 115 aa7.51□□□□□ -1.21
COL5A1-202ENST00000371820 GNRH2O43555 120 aa7.51□□□□□ -1.21
COL5A1-202ENST00000371820 ZNF688P0C7X2 276 aa7.51□□□□□ -1.21
COL5A1-202ENST00000371820 FXYD2P54710 66 aa7.51□□□□□ -1.21
COL5A1-202ENST00000371820 PRR9Q5T870 116 aa7.51□□□□□ -1.21
COL5A1-202ENST00000371820 DCANP1Q8TF63 244 aa7.51□□□□□ -1.21
COL5A1-202ENST00000371820 PHLDA1Q8WV24 401 aaPredicted RBP7.51□□□□□ -1.21
COL5A1-202ENST00000371820 SPANXB1Q9NS25 103 aaPredicted RBP7.51□□□□□ -1.21
COL5A1-202ENST00000371820 TP73-AS1Q9UF72 201 aa7.51□□□□□ -1.21
COL5A1-202ENST00000371820 TRBV7-3A0A075B6L6 115 aa7.5□□□□□ -1.21
COL5A1-202ENST00000371820 TRBV20-1A0A075B6N2 111 aa7.5□□□□□ -1.21
COL5A1-202ENST00000371820 IGHV1OR15-1A0A075B7D0 117 aa7.5□□□□□ -1.21
COL5A1-202ENST00000371820 A0A0J9YX75 114 aa7.5□□□□□ -1.21
COL5A1-202ENST00000371820 F5H697 171 aa7.5□□□□□ -1.21
COL5A1-202ENST00000371820 SCGB1A1P11684 91 aa7.5□□□□□ -1.21
COL5A1-202ENST00000371820 SRSF9Q13242 221 aaKnown RBP eCLIP7.5□□□□□ -1.21
COL5A1-202ENST00000371820 RRN3P1Q2M238 152 aa7.5□□□□□ -1.21
COL5A1-202ENST00000371820 SCGB1D4Q6XE38 83 aa7.5□□□□□ -1.21
COL5A1-202ENST00000371820 ZFP2Q6ZN57 461 aa7.5□□□□□ -1.21
COL5A1-202ENST00000371820 C9orf85Q96MD7 179 aa7.5□□□□□ -1.21
COL5A1-202ENST00000371820 IGIPA6NJ69 53 aa7.49□□□□□ -1.21
COL5A1-202ENST00000371820 PRB4P10163 310 aaPredicted RBP7.49□□□□□ -1.21
COL5A1-202ENST00000371820 GAGE13Q4V321 117 aa7.49□□□□□ -1.21
COL5A1-202ENST00000371820 MAPKAPK5-AS1Q8N8E1 139 aa7.49□□□□□ -1.21
COL5A1-202ENST00000371820 C1QTNF4Q9BXJ3 329 aa7.49□□□□□ -1.21
COL5A1-202ENST00000371820 C11orf68Q9H3H3 251 aaKnown RBP7.49□□□□□ -1.21
COL5A1-202ENST00000371820 KLK5Q9Y337 293 aaPredicted RBP7.49□□□□□ -1.21
COL5A1-202ENST00000371820 ZNF815PA8K554 130 aa7.48□□□□□ -1.21
COL5A1-202ENST00000371820 I3L3M4 83 aa7.48□□□□□ -1.21
COL5A1-202ENST00000371820 J3KRW8 73 aa7.48□□□□□ -1.21
COL5A1-202ENST00000371820 LINC00315P59091 139 aa7.48□□□□□ -1.21
COL5A1-202ENST00000371820 NFE4Q86UQ8 179 aa7.48□□□□□ -1.21
COL5A1-202ENST00000371820 PLEKHB2Q96CS7 222 aa7.48□□□□□ -1.21
COL5A1-202ENST00000371820 RPL39LQ96EH5 51 aaKnown RBP7.48□□□□□ -1.21
COL5A1-202ENST00000371820 PRADC1Q9BSG0 188 aa7.48□□□□□ -1.21
COL5A1-202ENST00000371820 PYGO1Q9Y3Y4 419 aa7.48□□□□□ -1.21
COL5A1-202ENST00000371820 IGHV3-16A0A0C4DH30 117 aa7.47□□□□□ -1.21
COL5A1-202ENST00000371820 SDHAF1A6NFY7 115 aa7.47□□□□□ -1.21
COL5A1-202ENST00000371820 KNCNA6PVL3 124 aa7.47□□□□□ -1.21
COL5A1-202ENST00000371820 A8MWV9 139 aa7.47□□□□□ -1.21
COL5A1-202ENST00000371820 RPL24P83731 157 aaKnown RBP7.47□□□□□ -1.21
COL5A1-202ENST00000371820 SMAGPQ0VAQ4 97 aa7.47□□□□□ -1.21
COL5A1-202ENST00000371820 ZNF876PQ49A33 203 aa7.47□□□□□ -1.21
COL5A1-202ENST00000371820 SUMO4Q6EEV6 95 aa7.47□□□□□ -1.21
COL5A1-202ENST00000371820 ATP6V0E2Q8NHE4 81 aa7.47□□□□□ -1.21
COL5A1-202ENST00000371820 LINC00476Q8WZB0 136 aa7.47□□□□□ -1.21
COL5A1-202ENST00000371820 DNAJC30Q96LL9 226 aa7.47□□□□□ -1.21
COL5A1-202ENST00000371820 MDFICQ9P1T7 246 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 187.3 ms