RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 ODF3BA8MYP8 253 aa6.88□□□□□ -1.31
SMARCA1-202ENST00000371122 MUSTN1Q8IVN3 82 aa6.88□□□□□ -1.31
SMARCA1-202ENST00000371122 SLC25A20O43772 301 aa6.88□□□□□ -1.31
SMARCA1-202ENST00000371122 CRYGBP07316 175 aa6.88□□□□□ -1.31
SMARCA1-202ENST00000371122 LINC00310P59036 64 aa6.88□□□□□ -1.31
SMARCA1-202ENST00000371122 SS18Q15532 418 aa6.88□□□□□ -1.31
SMARCA1-202ENST00000371122 DEFB135Q30KP9 77 aa6.88□□□□□ -1.31
SMARCA1-202ENST00000371122 BAALCQ8WXS3 180 aa6.88□□□□□ -1.31
SMARCA1-202ENST00000371122 A8MZ25 164 aa6.88□□□□□ -1.31
SMARCA1-202ENST00000371122 PRR9Q5T870 116 aa6.88□□□□□ -1.31
SMARCA1-202ENST00000371122 WFDC10AQ9H1F0 79 aa6.88□□□□□ -1.31
SMARCA1-202ENST00000371122 DCHS2Q6V1P9 2916 aa6.88□□□□□ -1.31
SMARCA1-202ENST00000371122 IGLL5B9A064 214 aa6.87□□□□□ -1.31
SMARCA1-202ENST00000371122 IGLV2-11P01706 119 aa6.87□□□□□ -1.31
SMARCA1-202ENST00000371122 C9orf47Q6ZRZ4 202 aa6.87□□□□□ -1.31
SMARCA1-202ENST00000371122 TRBV20-1A0A075B6N2 111 aa6.87□□□□□ -1.31
SMARCA1-202ENST00000371122 H3BMM0 161 aa6.87□□□□□ -1.31
SMARCA1-202ENST00000371122 CTRLP40313 264 aa6.87□□□□□ -1.31
SMARCA1-202ENST00000371122 ZFAND6Q6FIF0 208 aa6.87□□□□□ -1.31
SMARCA1-202ENST00000371122 UBE2WQ96B02 151 aa6.87□□□□□ -1.31
SMARCA1-202ENST00000371122 KRTAP10-9P60411 292 aa6.87□□□□□ -1.31
SMARCA1-202ENST00000371122 PIFOQ8TCI5 191 aa6.87□□□□□ -1.31
SMARCA1-202ENST00000371122 LY6LH3BQJ8 138 aa6.86□□□□□ -1.31
SMARCA1-202ENST00000371122 EDA2RQ9HAV5 297 aa6.86□□□□□ -1.31
SMARCA1-202ENST00000371122 A6NDX4 124 aa6.86□□□□□ -1.31
SMARCA1-202ENST00000371122 GYPEP15421 78 aa6.86□□□□□ -1.31
SMARCA1-202ENST00000371122 MAPKAPK5-AS1Q8N8E1 139 aa6.86□□□□□ -1.31
SMARCA1-202ENST00000371122 CARD19Q96LW7 228 aa6.86□□□□□ -1.31
SMARCA1-202ENST00000371122 A0A0J9YX75 114 aa6.86□□□□□ -1.31
SMARCA1-202ENST00000371122 CRLF1O75462 422 aa6.86□□□□□ -1.31
SMARCA1-202ENST00000371122 Q6ZTI0 123 aa6.86□□□□□ -1.31
SMARCA1-202ENST00000371122 BOD1L2Q8IYS8 172 aa6.86□□□□□ -1.31
SMARCA1-202ENST00000371122 GAGE12HA6NDE8 117 aa6.86□□□□□ -1.31
SMARCA1-202ENST00000371122 J3QLI3 93 aa6.86□□□□□ -1.31
SMARCA1-202ENST00000371122 ZFAND3Q9H8U3 227 aa6.86□□□□□ -1.31
SMARCA1-202ENST00000371122 CFC1BP0CG36 223 aa6.85□□□□□ -1.31
SMARCA1-202ENST00000371122 CFC1P0CG37 223 aa6.85□□□□□ -1.31
SMARCA1-202ENST00000371122 ADGRG4Q8IZF6 3080 aa6.85□□□□□ -1.31
SMARCA1-202ENST00000371122 IGHV3-30P01768 117 aa6.85□□□□□ -1.31
SMARCA1-202ENST00000371122 IGHV3-33P01772 117 aa6.85□□□□□ -1.31
SMARCA1-202ENST00000371122 IGHV3-30-3P0DP02 117 aa6.85□□□□□ -1.31
SMARCA1-202ENST00000371122 IGHV3-30-5P0DP03 117 aa6.85□□□□□ -1.31
SMARCA1-202ENST00000371122 LENEPQ9Y5L5 61 aa6.85□□□□□ -1.31
SMARCA1-202ENST00000371122 FLNAP21333 2647 aaKnown RBP6.84□□□□□ -1.31
SMARCA1-202ENST00000371122 UBE2DNLQ8IWF7 75 aa6.84□□□□□ -1.31
SMARCA1-202ENST00000371122 SPAG8Q99932 426 aaPredicted RBP6.84□□□□□ -1.31
SMARCA1-202ENST00000371122 ZNF561-AS1K7EIQ3 104 aa6.84□□□□□ -1.32
SMARCA1-202ENST00000371122 IGLC6P0CF74 106 aa6.84□□□□□ -1.32
SMARCA1-202ENST00000371122 MYCNOSP40205 109 aa6.84□□□□□ -1.32
SMARCA1-202ENST00000371122 MRPL52Q86TS9 123 aaKnown RBP6.84□□□□□ -1.32
SMARCA1-202ENST00000371122 ZFAND2AQ8N6M9 145 aa6.84□□□□□ -1.32
SMARCA1-202ENST00000371122 CLEC2BQ92478 149 aa6.84□□□□□ -1.32
SMARCA1-202ENST00000371122 SETXQ7Z333 2677 aaKnown RBP6.84□□□□□ -1.32
SMARCA1-202ENST00000371122 ITPR3Q14573 2671 aa6.83□□□□□ -1.32
SMARCA1-202ENST00000371122 PSCAO43653 123 aa6.83□□□□□ -1.32
SMARCA1-202ENST00000371122 C11orf71Q6IPW1 123 aa6.83□□□□□ -1.32
SMARCA1-202ENST00000371122 GPHB5Q86YW7 130 aa6.83□□□□□ -1.32
SMARCA1-202ENST00000371122 LINC00482Q8N8I6 264 aa6.83□□□□□ -1.32
SMARCA1-202ENST00000371122 Q6ZUT4 128 aa6.83□□□□□ -1.32
SMARCA1-202ENST00000371122 SMR3AQ99954 134 aa6.83□□□□□ -1.32
SMARCA1-202ENST00000371122 H3BUA1 57 aa6.83□□□□□ -1.32
SMARCA1-202ENST00000371122 TRAV26-1A0A087WT03 109 aa6.82□□□□□ -1.32
SMARCA1-202ENST00000371122 TRAV4A0A0B4J268 109 aa6.82□□□□□ -1.32
SMARCA1-202ENST00000371122 TRAV25A0A0B4J276 109 aa6.82□□□□□ -1.32
SMARCA1-202ENST00000371122 HAMPP81172 84 aa6.82□□□□□ -1.32
SMARCA1-202ENST00000371122 DNAJC9-AS1A6NH13 148 aa6.82□□□□□ -1.32
SMARCA1-202ENST00000371122 PPDPFLQ8WWR9 84 aa6.82□□□□□ -1.32
SMARCA1-202ENST00000371122 CELSR1Q9NYQ6 3014 aa6.82□□□□□ -1.32
SMARCA1-202ENST00000371122 RAI1Q7Z5J4 1906 aaPredicted RBP6.82□□□□□ -1.32
SMARCA1-202ENST00000371122 Q8N976 141 aa6.82□□□□□ -1.32
SMARCA1-202ENST00000371122 PRSS47A8MTI9 375 aa6.81□□□□□ -1.32
SMARCA1-202ENST00000371122 F8W1H4 67 aa6.81□□□□□ -1.32
SMARCA1-202ENST00000371122 RNF185Q96GF1 192 aa6.81□□□□□ -1.32
SMARCA1-202ENST00000371122 IGKV2D-24A0A075B6R9 120 aa6.81□□□□□ -1.32
SMARCA1-202ENST00000371122 CMC4P56277 68 aaPredicted RBP6.81□□□□□ -1.32
SMARCA1-202ENST00000371122 DEFB105AQ8NG35 78 aa6.81□□□□□ -1.32
SMARCA1-202ENST00000371122 URB1-AS1Q96HZ7 61 aa6.81□□□□□ -1.32
SMARCA1-202ENST00000371122 MAP6D1Q9H9H5 199 aa6.81□□□□□ -1.32
SMARCA1-202ENST00000371122 C20orf203Q8NBC4 194 aa6.81□□□□□ -1.32
SMARCA1-202ENST00000371122 LINC00526Q96FQ7 95 aa6.8□□□□□ -1.32
SMARCA1-202ENST00000371122 PRORYQ9H606 182 aa6.8□□□□□ -1.32
SMARCA1-202ENST00000371122 TNFRSF13BO14836 293 aaPredicted RBP6.8□□□□□ -1.32
SMARCA1-202ENST00000371122 IGHG4P01861 327 aa6.8□□□□□ -1.32
SMARCA1-202ENST00000371122 RBX1P62877 108 aa6.8□□□□□ -1.32
SMARCA1-202ENST00000371122 HERVK_113P63121 156 aa6.8□□□□□ -1.32
SMARCA1-202ENST00000371122 RHOHQ15669 191 aa6.8□□□□□ -1.32
SMARCA1-202ENST00000371122 TOMM6Q96B49 74 aa6.8□□□□□ -1.32
SMARCA1-202ENST00000371122 CDKN2A-AS1Q9UH64 79 aa6.8□□□□□ -1.32
SMARCA1-202ENST00000371122 TRBV7-3A0A075B6L6 115 aa6.8□□□□□ -1.32
SMARCA1-202ENST00000371122 SIVA1O15304 175 aa6.8□□□□□ -1.32
SMARCA1-202ENST00000371122 ATP6V0E2Q8NHE4 81 aa6.8□□□□□ -1.32
SMARCA1-202ENST00000371122 VSIG2Q96IQ7 327 aa6.8□□□□□ -1.32
SMARCA1-202ENST00000371122 KLK12Q9UKR0 248 aa6.8□□□□□ -1.32
SMARCA1-202ENST00000371122 KMT2BQ9UMN6 2715 aaPredicted RBP6.79□□□□□ -1.32
SMARCA1-202ENST00000371122 K7EQG2 157 aa6.79□□□□□ -1.32
SMARCA1-202ENST00000371122 CRYBA4P53673 196 aa6.79□□□□□ -1.32
SMARCA1-202ENST00000371122 C15orf53Q8NAA6 179 aa6.79□□□□□ -1.32
SMARCA1-202ENST00000371122 HELZ2Q9BYK8 2649 aaKnown RBP6.79□□□□□ -1.32
SMARCA1-202ENST00000371122 ATP5G1P05496 136 aa6.79□□□□□ -1.32
SMARCA1-202ENST00000371122 IGHV4-31P0DP07 118 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms