RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 C10orf128Q5T292 105 aa0.26□□□□□ -2.37
RNU6-28P-201ENST00000362378 UBE2DNLQ8IWF7 75 aa0.26□□□□□ -2.37
RNU6-28P-201ENST00000362378 LENEPQ9Y5L5 61 aa0.26□□□□□ -2.37
RNU6-28P-201ENST00000362378 ROCK2O75116 1388 aaKnown RBP0.26□□□□□ -2.37
RNU6-28P-201ENST00000362378 MRC1P22897 1456 aa0.26□□□□□ -2.37
RNU6-28P-201ENST00000362378 MYH7P12883 1935 aa0.26□□□□□ -2.37
RNU6-28P-201ENST00000362378 PATJQ8NI35 1801 aa0.25□□□□□ -2.37
RNU6-28P-201ENST00000362378 QRICH2Q9H0J4 1663 aa0.25□□□□□ -2.37
RNU6-28P-201ENST00000362378 PPIP5K1Q6PFW1 1433 aa0.25□□□□□ -2.37
RNU6-28P-201ENST00000362378 PPP3R2Q96LZ3 170 aa0.25□□□□□ -2.37
RNU6-28P-201ENST00000362378 R4GMQ9 66 aa0.25□□□□□ -2.37
RNU6-28P-201ENST00000362378 A2ML1A8K2U0 1454 aa0.24□□□□□ -2.37
RNU6-28P-201ENST00000362378 MIF4GDA9UHW6 222 aaKnown RBP0.24□□□□□ -2.37
RNU6-28P-201ENST00000362378 CFAP126Q5VTH2 177 aa0.24□□□□□ -2.37
RNU6-28P-201ENST00000362378 SSBP3-AS1Q7Z2R9 100 aa0.24□□□□□ -2.37
RNU6-28P-201ENST00000362378 TTC9CQ8N5M4 171 aa0.24□□□□□ -2.37
RNU6-28P-201ENST00000362378 PP6455Q8WZ26 134 aa0.24□□□□□ -2.37
RNU6-28P-201ENST00000362378 ZNF609O15014 1411 aa0.23□□□□□ -2.37
RNU6-28P-201ENST00000362378 CPSF1Q10570 1443 aaKnown RBP0.23□□□□□ -2.37
RNU6-28P-201ENST00000362378 DOCK1Q14185 1865 aa0.23□□□□□ -2.37
RNU6-28P-201ENST00000362378 ZNF815PA8K554 130 aa0.23□□□□□ -2.37
RNU6-28P-201ENST00000362378 APOC2P02655 101 aa0.23□□□□□ -2.37
RNU6-28P-201ENST00000362378 AKAIN1P0CW23 69 aa0.23□□□□□ -2.37
RNU6-28P-201ENST00000362378 NALCNQ8IZF0 1738 aa0.22□□□□□ -2.37
RNU6-28P-201ENST00000362378 M0R135 149 aa0.22□□□□□ -2.37
RNU6-28P-201ENST00000362378 SPINK1P00995 79 aa0.22□□□□□ -2.37
RNU6-28P-201ENST00000362378 CATR1Q13166 79 aa0.22□□□□□ -2.37
RNU6-28P-201ENST00000362378 C8orf59Q8N0T1 100 aaPredicted RBP0.22□□□□□ -2.37
RNU6-28P-201ENST00000362378 SPANXDQ9BXN6 97 aa0.22□□□□□ -2.37
RNU6-28P-201ENST00000362378 CYP4F30PQ9H0H9 118 aa0.22□□□□□ -2.37
RNU6-28P-201ENST00000362378 MAST4O15021 2626 aa0.22□□□□□ -2.37
RNU6-28P-201ENST00000362378 CELSR2Q9HCU4 2923 aa0.22□□□□□ -2.37
RNU6-28P-201ENST00000362378 ZFYVE26Q68DK2 2539 aa0.22□□□□□ -2.37
RNU6-28P-201ENST00000362378 DLEU1O43261 78 aa0.21□□□□□ -2.38
RNU6-28P-201ENST00000362378 SPAG11BQ08648 103 aa0.21□□□□□ -2.38
RNU6-28P-201ENST00000362378 SPAG11AQ6PDA7 123 aa0.21□□□□□ -2.38
RNU6-28P-201ENST00000362378 A0A1B0GV90 55 aa0.2□□□□□ -2.38
RNU6-28P-201ENST00000362378 TNFP01375 233 aa0.2□□□□□ -2.38
RNU6-28P-201ENST00000362378 SPINK8P0C7L1 97 aa0.2□□□□□ -2.38
RNU6-28P-201ENST00000362378 C5orf38Q86SI9 138 aa0.2□□□□□ -2.38
RNU6-28P-201ENST00000362378 FAM213BQ8TBF2 198 aa0.2□□□□□ -2.38
RNU6-28P-201ENST00000362378 AMELXQ99217 191 aa0.2□□□□□ -2.38
RNU6-28P-201ENST00000362378 SCN3BQ9NY72 215 aa0.2□□□□□ -2.38
RNU6-28P-201ENST00000362378 V9GYH0 126 aa0.2□□□□□ -2.38
RNU6-28P-201ENST00000362378 MYH8P13535 1937 aa0.2□□□□□ -2.38
RNU6-28P-201ENST00000362378 KTN1Q86UP2 1357 aaKnown RBP0.19□□□□□ -2.38
RNU6-28P-201ENST00000362378 SSSCA1O60232 199 aa0.19□□□□□ -2.38
RNU6-28P-201ENST00000362378 IFNGP01579 166 aa0.19□□□□□ -2.38
RNU6-28P-201ENST00000362378 COMMD6Q7Z4G1 85 aa0.19□□□□□ -2.38
RNU6-28P-201ENST00000362378 SMIM4Q8WVI0 70 aa0.19□□□□□ -2.38
RNU6-28P-201ENST00000362378 CNFNQ9BYD5 112 aa0.19□□□□□ -2.38
RNU6-28P-201ENST00000362378 NDUFA4L2Q9NRX3 87 aa0.19□□□□□ -2.38
RNU6-28P-201ENST00000362378 OTOGQ6ZRI0 2925 aa0.18□□□□□ -2.38
RNU6-28P-201ENST00000362378 DOCK2Q92608 1830 aa0.18□□□□□ -2.38
RNU6-28P-201ENST00000362378 SHROOM2Q13796 1616 aa0.18□□□□□ -2.38
RNU6-28P-201ENST00000362378 TRBV7-3A0A075B6L6 115 aa0.18□□□□□ -2.38
RNU6-28P-201ENST00000362378 A0A0D9SFI3 127 aa0.18□□□□□ -2.38
RNU6-28P-201ENST00000362378 CTXND1A0A1B0GTU2 59 aa0.18□□□□□ -2.38
RNU6-28P-201ENST00000362378 MGST2Q99735 147 aa0.18□□□□□ -2.38
RNU6-28P-201ENST00000362378 NPVFQ9HCQ7 196 aa0.18□□□□□ -2.38
RNU6-28P-201ENST00000362378 CUL7Q14999 1698 aa0.18□□□□□ -2.38
RNU6-28P-201ENST00000362378 F8P00451 2351 aa0.17□□□□□ -2.38
RNU6-28P-201ENST00000362378 LRRC37A2A6NM11 1700 aa0.17□□□□□ -2.38
RNU6-28P-201ENST00000362378 OOSP1A8MZH6 123 aa0.17□□□□□ -2.38
RNU6-28P-201ENST00000362378 PTPRZ1P23471 2315 aaPredicted RBP0.17□□□□□ -2.38
RNU6-28P-201ENST00000362378 MRPL54Q6P161 138 aaKnown RBP0.17□□□□□ -2.38
RNU6-28P-201ENST00000362378 ROBO1Q9Y6N7 1651 aa0.17□□□□□ -2.38
RNU6-28P-201ENST00000362378 MYOM2P54296 1465 aa0.16□□□□□ -2.38
RNU6-28P-201ENST00000362378 TSLPQ969D9 159 aa0.16□□□□□ -2.38
RNU6-28P-201ENST00000362378 DYNLRB1Q9NP97 96 aa0.16□□□□□ -2.38
RNU6-28P-201ENST00000362378 KDM3BQ7LBC6 1761 aa0.16□□□□□ -2.38
RNU6-28P-201ENST00000362378 RIMS1Q86UR5 1692 aaKnown RBP0.15□□□□□ -2.39
RNU6-28P-201ENST00000362378 SMG6Q86US8 1419 aaKnown RBP0.15□□□□□ -2.39
RNU6-28P-201ENST00000362378 TPPP2P59282 170 aa0.15□□□□□ -2.39
RNU6-28P-201ENST00000362378 COX17Q14061 63 aa0.15□□□□□ -2.39
RNU6-28P-201ENST00000362378 C9orf153Q5TBE3 101 aa0.15□□□□□ -2.39
RNU6-28P-201ENST00000362378 C2orf88Q9BSF0 95 aa0.15□□□□□ -2.39
RNU6-28P-201ENST00000362378 BIVM-ERCC5R4GMW8 1640 aa0.15□□□□□ -2.39
RNU6-28P-201ENST00000362378 FAM208BQ5VWN6 2430 aa0.15□□□□□ -2.39
RNU6-28P-201ENST00000362378 EIF4G3O43432 1585 aaKnown RBP0.15□□□□□ -2.39
RNU6-28P-201ENST00000362378 PI4KAP42356 2102 aa0.14□□□□□ -2.39
RNU6-28P-201ENST00000362378 LRP6O75581 1613 aa0.14□□□□□ -2.39
RNU6-28P-201ENST00000362378 LINC00472Q9H8W2 130 aa0.14□□□□□ -2.39
RNU6-28P-201ENST00000362378 LINC00474Q9P2X8 69 aa0.14□□□□□ -2.39
RNU6-28P-201ENST00000362378 PRO0255Q9UI72 69 aa0.14□□□□□ -2.39
RNU6-28P-201ENST00000362378 IER3IP1Q9Y5U9 82 aa0.14□□□□□ -2.39
RNU6-28P-201ENST00000362378 WNK3Q9BYP7 1800 aa0.14□□□□□ -2.39
RNU6-28P-201ENST00000362378 ZNF236Q9UL36 1845 aa0.14□□□□□ -2.39
RNU6-28P-201ENST00000362378 IGF2RP11717 2491 aa0.14□□□□□ -2.39
RNU6-28P-201ENST00000362378 CHD9Q3L8U1 2897 aa0.14□□□□□ -2.39
RNU6-28P-201ENST00000362378 KIF21AQ7Z4S6 1674 aa0.14□□□□□ -2.39
RNU6-28P-201ENST00000362378 LAMC1P11047 1609 aa0.13□□□□□ -2.39
RNU6-28P-201ENST00000362378 F8VRH5 84 aa0.13□□□□□ -2.39
RNU6-28P-201ENST00000362378 HMGN4O00479 90 aa0.13□□□□□ -2.39
RNU6-28P-201ENST00000362378 UQCR11O14957 56 aa0.13□□□□□ -2.39
RNU6-28P-201ENST00000362378 SNAPC5O75971 98 aa0.13□□□□□ -2.39
RNU6-28P-201ENST00000362378 BAGE2Q86Y30 109 aa0.13□□□□□ -2.39
RNU6-28P-201ENST00000362378 U3KQA8 63 aa0.13□□□□□ -2.39
RNU6-28P-201ENST00000362378 PLXNB2O15031 1838 aa0.13□□□□□ -2.39
RNU6-28P-201ENST00000362378 MYOM1P52179 1685 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms