RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 TRBV6-5A0A0K0K1A5 114 aa2□□□□□ -2.09
LTN1-201ENST00000361371 DAZ2Q13117 558 aaKnown RBP2□□□□□ -2.09
LTN1-201ENST00000361371 C12orf74Q32Q52 190 aa2□□□□□ -2.09
LTN1-201ENST00000361371 SMIM15Q7Z3B0 74 aa2□□□□□ -2.09
LTN1-201ENST00000361371 PCP2Q8IVA1 136 aa2□□□□□ -2.09
LTN1-201ENST00000361371 LINC00612Q8N6U2 182 aa2□□□□□ -2.09
LTN1-201ENST00000361371 CHCHD1Q96BP2 118 aaKnown RBP2□□□□□ -2.09
LTN1-201ENST00000361371 TENM2Q9NT68 2774 aa2□□□□□ -2.09
LTN1-201ENST00000361371 IGLV4-60A0A075B6I1 120 aa2□□□□□ -2.09
LTN1-201ENST00000361371 TRGV4A0A0C4DH28 118 aa2□□□□□ -2.09
LTN1-201ENST00000361371 PRSS47A8MTI9 375 aa2□□□□□ -2.09
LTN1-201ENST00000361371 HHLA3Q9XRX5 114 aa2□□□□□ -2.09
LTN1-201ENST00000361371 EREGO14944 169 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 NUDT3O95989 172 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 NANOS2P60321 138 aaKnown RBP1.99□□□□□ -2.09
LTN1-201ENST00000361371 MAPKAPK5-AS1Q8N8E1 139 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 SYT8Q8NBV8 401 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 SCGB3A1Q96QR1 104 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 C20orf144Q9BQM9 153 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 TRAV26-1A0A087WT03 109 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 IGKV3OR2-268A0A0C4DH90 116 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 UBE2D3P61077 147 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 UBE2D2P62837 147 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 LINC01545Q5VT33 79 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 C20orf78Q9BR46 151 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 NXT2Q9NPJ8 142 aaKnown RBP1.99□□□□□ -2.09
LTN1-201ENST00000361371 A0A0J9YWU9 116 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 A8MWV9 139 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 LAGE3Q14657 143 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 C16orf74Q96GX8 76 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 C1QTNF4Q9BXJ3 329 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 TNFRSF18Q9Y5U5 241 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 TGP01266 2768 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 IGHV3-64A0A075B6Q5 118 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 C11orf86A6NJI1 115 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 IGLC3P0DOY3 106 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 NDUFAF3Q9BU61 184 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 VCYO14598 125 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 Q6ZUT4 128 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 IGLV4-3A0A075B6K6 122 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 F5H768 121 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 GYPEP15421 78 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 TSPEAR-AS2P59090 65 aa1.99□□□□□ -2.09
LTN1-201ENST00000361371 PLECQ15149 4684 aaKnown RBP1.98□□□□□ -2.09
LTN1-201ENST00000361371 MUC4Q99102 2169 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 KIR2DL5BA0A0G2JN68 375 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 KIR2DL5BA0A0G2JPC4 375 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 CMC4P56277 68 aaPredicted RBP1.98□□□□□ -2.09
LTN1-201ENST00000361371 GAGE6Q13070 117 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 KIR2DL5AQ8N109 375 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 KIR2DL5BQ8NHK3 375 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 IGLV4-69A0A075B6H9 119 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 PET117Q6UWS5 81 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 BAALCQ8WXS3 180 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 LINC01546A6NGU7 62 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 K7EQD1 137 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 LGALS9BQ3B8N2 356 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 SPATA45Q537H7 98 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 CLPSL2Q6UWE3 100 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 TRAV9-2A0A087WT02 112 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 TRAV8-3A0A0A6YYJ7 113 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 TRAV4A0A0B4J268 109 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 EIF4EBP3O60516 100 aaPredicted RBP1.98□□□□□ -2.09
LTN1-201ENST00000361371 TSPAN13O95857 204 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 CRYBA4P53673 196 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 DAD1P61803 113 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 TOMM6Q96B49 74 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 TRAV13-1A0A0B4J241 112 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 I3L3M4 83 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 KIR2DL4Q99706 377 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 LAMTOR2Q9Y2Q5 125 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 PAX4O43316 350 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 ATP5G1P05496 136 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 DDTP30046 118 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 RPL36AP83881 106 aaKnown RBP1.98□□□□□ -2.09
LTN1-201ENST00000361371 ERASQ7Z444 233 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 RPL36ALQ969Q0 106 aaKnown RBP1.98□□□□□ -2.09
LTN1-201ENST00000361371 UBE2D4Q9Y2X8 147 aa1.98□□□□□ -2.09
LTN1-201ENST00000361371 TRAV8-6A0A0B4J262 113 aa1.97□□□□□ -2.09
LTN1-201ENST00000361371 TRBV6-4A0A1B0GX49 114 aa1.97□□□□□ -2.09
LTN1-201ENST00000361371 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.97□□□□□ -2.09
LTN1-201ENST00000361371 RHODO00212 210 aa1.97□□□□□ -2.09
LTN1-201ENST00000361371 FGF6P10767 208 aa1.97□□□□□ -2.09
LTN1-201ENST00000361371 COX6A2Q02221 97 aa1.97□□□□□ -2.09
LTN1-201ENST00000361371 COTL1Q14019 142 aa1.97□□□□□ -2.09
LTN1-201ENST00000361371 DAZ4Q86SG3 579 aaKnown RBP1.97□□□□□ -2.09
LTN1-201ENST00000361371 SNHG12Q9BXW3 62 aa1.97□□□□□ -2.09
LTN1-201ENST00000361371 DAZ3Q9NR90 486 aaKnown RBP1.97□□□□□ -2.09
LTN1-201ENST00000361371 CYSLTR1Q9Y271 337 aa1.97□□□□□ -2.09
LTN1-201ENST00000361371 RYR2Q92736 4967 aa1.97□□□□□ -2.09
LTN1-201ENST00000361371 RYR3Q15413 4870 aa1.97□□□□□ -2.09
LTN1-201ENST00000361371 TRBV7-3A0A075B6L6 115 aa1.97□□□□□ -2.09
LTN1-201ENST00000361371 PTH2Q96A98 100 aa1.97□□□□□ -2.09
LTN1-201ENST00000361371 LINC00526Q96FQ7 95 aa1.97□□□□□ -2.09
LTN1-201ENST00000361371 VAMP8Q9BV40 100 aa1.97□□□□□ -2.09
LTN1-201ENST00000361371 MAP1LC3CQ9BXW4 147 aa1.97□□□□□ -2.09
LTN1-201ENST00000361371 ZMAT4Q9H898 229 aa1.97□□□□□ -2.09
LTN1-201ENST00000361371 CDKN2A-AS1Q9UH64 79 aa1.97□□□□□ -2.09
LTN1-201ENST00000361371 PRO0255Q9UI72 69 aa1.97□□□□□ -2.09
LTN1-201ENST00000361371 DNAH9Q9NYC9 4486 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms