RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 SLPIP03973 132 aa12.82□□□□□ -0.36
COL4A2-201ENST00000360467 Q6ZS46 218 aa12.82□□□□□ -0.36
COL4A2-201ENST00000360467 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.82□□□□□ -0.36
COL4A2-201ENST00000360467 PPDPFQ9H3Y8 114 aa12.82□□□□□ -0.36
COL4A2-201ENST00000360467 NEXN-AS1Q8NBZ9 246 aa12.82□□□□□ -0.36
COL4A2-201ENST00000360467 SS18L2Q9UHA2 77 aa12.81□□□□□ -0.36
COL4A2-201ENST00000360467 SCXQ7RTU7 201 aa12.81□□□□□ -0.36
COL4A2-201ENST00000360467 TMEM258P61165 79 aa12.81□□□□□ -0.36
COL4A2-201ENST00000360467 ZNF702PQ9H963 129 aa12.81□□□□□ -0.36
COL4A2-201ENST00000360467 LOC100131303A0A0U1RQF7 123 aa12.8□□□□□ -0.36
COL4A2-201ENST00000360467 ODF1Q14990 250 aa12.8□□□□□ -0.36
COL4A2-201ENST00000360467 NCOA6Q14686 2063 aaPredicted RBP12.8□□□□□ -0.36
COL4A2-201ENST00000360467 K7EQG2 157 aa12.8□□□□□ -0.36
COL4A2-201ENST00000360467 WFDC2Q14508 124 aa12.79□□□□□ -0.36
COL4A2-201ENST00000360467 OXLD1Q5BKU9 147 aa12.79□□□□□ -0.36
COL4A2-201ENST00000360467 C11orf71Q6IPW1 123 aa12.79□□□□□ -0.36
COL4A2-201ENST00000360467 LYPD6Q86Y78 171 aa12.79□□□□□ -0.36
COL4A2-201ENST00000360467 IGKV2-28A0A075B6P5 120 aa12.79□□□□□ -0.36
COL4A2-201ENST00000360467 IGKV2D-28P01615 120 aa12.79□□□□□ -0.36
COL4A2-201ENST00000360467 FAM236AA0A1B0GUQ0 79 aa12.79□□□□□ -0.36
COL4A2-201ENST00000360467 FAM236BA0A1B0GV22 79 aa12.79□□□□□ -0.36
COL4A2-201ENST00000360467 NANOS2P60321 138 aaKnown RBP12.79□□□□□ -0.36
COL4A2-201ENST00000360467 CFAP126Q5VTH2 177 aa12.79□□□□□ -0.36
COL4A2-201ENST00000360467 Q8N976 141 aa12.79□□□□□ -0.36
COL4A2-201ENST00000360467 UBE2D1P51668 147 aa12.78□□□□□ -0.36
COL4A2-201ENST00000360467 CDSNQ15517 529 aa12.78□□□□□ -0.36
COL4A2-201ENST00000360467 MED13LQ71F56 2210 aa12.78□□□□□ -0.36
COL4A2-201ENST00000360467 C19orf71A6NCJ1 209 aa12.78□□□□□ -0.36
COL4A2-201ENST00000360467 TMEM256-PLSCR3K7ERE1 68 aa12.78□□□□□ -0.36
COL4A2-201ENST00000360467 CLUHP3Q96NS8 147 aa12.78□□□□□ -0.36
COL4A2-201ENST00000360467 B5MCH6 92 aa12.77□□□□□ -0.36
COL4A2-201ENST00000360467 A0A0J9YWU9 116 aa12.77□□□□□ -0.37
COL4A2-201ENST00000360467 TRBV10-2A0A0K0K1G8 114 aa12.77□□□□□ -0.37
COL4A2-201ENST00000360467 LINC01006Q8NI28 216 aa12.77□□□□□ -0.37
COL4A2-201ENST00000360467 CEP192Q8TEP8 1941 aa12.77□□□□□ -0.37
COL4A2-201ENST00000360467 UFSP1Q6NVU6 142 aa12.77□□□□□ -0.37
COL4A2-201ENST00000360467 BRWD1-AS2P59051 145 aa12.77□□□□□ -0.37
COL4A2-201ENST00000360467 Q6ZPA2 131 aa12.76□□□□□ -0.37
COL4A2-201ENST00000360467 SMIM9A6NGZ8 99 aa12.76□□□□□ -0.37
COL4A2-201ENST00000360467 PTH2Q96A98 100 aa12.76□□□□□ -0.37
COL4A2-201ENST00000360467 TRAV10A0A0B4J240 114 aa12.75□□□□□ -0.37
COL4A2-201ENST00000360467 PIK3CD-AS1Q5SR53 167 aa12.75□□□□□ -0.37
COL4A2-201ENST00000360467 SPINK6Q6UWN8 80 aa12.75□□□□□ -0.37
COL4A2-201ENST00000360467 SHANK1Q9Y566 2161 aa12.75□□□□□ -0.37
COL4A2-201ENST00000360467 SEC61GP60059 68 aa12.75□□□□□ -0.37
COL4A2-201ENST00000360467 MIAQ16674 131 aa12.75□□□□□ -0.37
COL4A2-201ENST00000360467 C7orf33Q8WU49 177 aa12.75□□□□□ -0.37
COL4A2-201ENST00000360467 MIFP14174 115 aa12.75□□□□□ -0.37
COL4A2-201ENST00000360467 TANC2Q9HCD6 1990 aa12.75□□□□□ -0.37
COL4A2-201ENST00000360467 MUC6Q6W4X9 2439 aa12.75□□□□□ -0.37
COL4A2-201ENST00000360467 A0A0J9YXY3 114 aa12.74□□□□□ -0.37
COL4A2-201ENST00000360467 CACNA1HO95180 2353 aa12.74□□□□□ -0.37
COL4A2-201ENST00000360467 CASC2Q6XLA1 102 aa12.74□□□□□ -0.37
COL4A2-201ENST00000360467 WFDC10BQ8IUB3 73 aa12.74□□□□□ -0.37
COL4A2-201ENST00000360467 RETNQ9HD89 108 aa12.74□□□□□ -0.37
COL4A2-201ENST00000360467 C9orf85Q96MD7 179 aa12.74□□□□□ -0.37
COL4A2-201ENST00000360467 RPL37AP8A6NKH3 93 aa12.73□□□□□ -0.37
COL4A2-201ENST00000360467 JMJD7-PLA2G4BH0Y9G9 81 aa12.73□□□□□ -0.37
COL4A2-201ENST00000360467 PRO3102Q9H379 93 aa12.73□□□□□ -0.37
COL4A2-201ENST00000360467 CDKN2A-AS1Q9UH64 79 aa12.73□□□□□ -0.37
COL4A2-201ENST00000360467 CRYGBP07316 175 aa12.73□□□□□ -0.37
COL4A2-201ENST00000360467 TRBV6-8A0A0A6YYG3 113 aa12.73□□□□□ -0.37
COL4A2-201ENST00000360467 H3BQ85 93 aa12.73□□□□□ -0.37
COL4A2-201ENST00000360467 KPRPQ5T749 579 aaPredicted RBP12.73□□□□□ -0.37
COL4A2-201ENST00000360467 PCDH15Q96QU1 1955 aa12.72□□□□□ -0.37
COL4A2-201ENST00000360467 A8MZ25 164 aa12.72□□□□□ -0.37
COL4A2-201ENST00000360467 KRTAP10-9P60411 292 aa12.72□□□□□ -0.37
COL4A2-201ENST00000360467 LY6LH3BQJ8 138 aa12.72□□□□□ -0.37
COL4A2-201ENST00000360467 TRAV23DV6A0A075B6W5 121 aa12.72□□□□□ -0.37
COL4A2-201ENST00000360467 KIR2DL5BA0A0G2JN68 375 aa12.71□□□□□ -0.37
COL4A2-201ENST00000360467 KIR2DL5BA0A0G2JPC4 375 aa12.71□□□□□ -0.37
COL4A2-201ENST00000360467 KIR2DL5AQ8N109 375 aa12.71□□□□□ -0.37
COL4A2-201ENST00000360467 EDN2P20800 178 aa12.71□□□□□ -0.37
COL4A2-201ENST00000360467 KIAA1549Q9HCM3 1950 aa12.71□□□□□ -0.38
COL4A2-201ENST00000360467 ZFAND3Q9H8U3 227 aa12.71□□□□□ -0.38
COL4A2-201ENST00000360467 UBE2D4Q9Y2X8 147 aa12.71□□□□□ -0.38
COL4A2-201ENST00000360467 ALPK3Q96L96 1907 aa12.71□□□□□ -0.38
COL4A2-201ENST00000360467 IGLV9-49A0A0B4J1Y8 123 aa12.7□□□□□ -0.38
COL4A2-201ENST00000360467 PTPRQQ9UMZ3 2332 aa12.69□□□□□ -0.38
COL4A2-201ENST00000360467 TCL1BO95988 128 aa12.69□□□□□ -0.38
COL4A2-201ENST00000360467 ODF3Q96PU9 254 aa12.69□□□□□ -0.38
COL4A2-201ENST00000360467 UPK3BQ9BT76 320 aa12.69□□□□□ -0.38
COL4A2-201ENST00000360467 BPY2O14599 106 aa12.69□□□□□ -0.38
COL4A2-201ENST00000360467 IGLV2-8P01709 118 aa12.69□□□□□ -0.38
COL4A2-201ENST00000360467 PSMG3-AS1Q96PY0 264 aa12.69□□□□□ -0.38
COL4A2-201ENST00000360467 DSCAML1Q8TD84 2053 aa12.68□□□□□ -0.38
COL4A2-201ENST00000360467 TP73-AS1Q9UF72 201 aa12.68□□□□□ -0.38
COL4A2-201ENST00000360467 FREM1Q5H8C1 2179 aa12.68□□□□□ -0.38
COL4A2-201ENST00000360467 DSCAMO60469 2012 aa12.68□□□□□ -0.38
COL4A2-201ENST00000360467 SPANXDQ9BXN6 97 aa12.68□□□□□ -0.38
COL4A2-201ENST00000360467 IGLV4-3A0A075B6K6 122 aa12.67□□□□□ -0.38
COL4A2-201ENST00000360467 SYCNQ0VAF6 134 aa12.67□□□□□ -0.38
COL4A2-201ENST00000360467 C11orf1Q9H5F2 150 aa12.67□□□□□ -0.38
COL4A2-201ENST00000360467 TNCP24821 2201 aa12.67□□□□□ -0.38
COL4A2-201ENST00000360467 TEN1Q86WV5 123 aa12.67□□□□□ -0.38
COL4A2-201ENST00000360467 CRIP1P50238 77 aa12.67□□□□□ -0.38
COL4A2-201ENST00000360467 P0C879 139 aa12.66□□□□□ -0.38
COL4A2-201ENST00000360467 C3orf84H3BNL1 204 aa12.66□□□□□ -0.38
COL4A2-201ENST00000360467 C1orf158Q8N1D5 194 aa12.66□□□□□ -0.38
COL4A2-201ENST00000360467 FAM208BQ5VWN6 2430 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms