RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 SMAGPQ0VAQ4 97 aa8.27□□□□□ -1.09
SSU72-202ENST00000359060 DEFB114Q30KQ6 69 aa8.27□□□□□ -1.09
SSU72-202ENST00000359060 NOP10Q9NPE3 64 aaKnown RBP8.27□□□□□ -1.09
SSU72-202ENST00000359060 J3QKU1 62 aa8.27□□□□□ -1.09
SSU72-202ENST00000359060 SPINK8P0C7L1 97 aa8.27□□□□□ -1.09
SSU72-202ENST00000359060 ZANQ9Y493 2812 aa8.26□□□□□ -1.09
SSU72-202ENST00000359060 C9orf85Q96MD7 179 aa8.26□□□□□ -1.09
SSU72-202ENST00000359060 ZMAT4Q9H898 229 aa8.26□□□□□ -1.09
SSU72-202ENST00000359060 CHCHD5Q9BSY4 110 aa8.26□□□□□ -1.09
SSU72-202ENST00000359060 NDUFA12Q9UI09 145 aa8.26□□□□□ -1.09
SSU72-202ENST00000359060 MUC4Q99102 2169 aa8.26□□□□□ -1.09
SSU72-202ENST00000359060 CRYBG3Q68DQ2 2970 aa8.26□□□□□ -1.09
SSU72-202ENST00000359060 TRBV27A0A0K0K1C4 114 aa8.26□□□□□ -1.09
SSU72-202ENST00000359060 TSSC4Q9Y5U2 329 aaPredicted RBP8.25□□□□□ -1.09
SSU72-202ENST00000359060 TEX15Q9BXT5 2789 aa8.25□□□□□ -1.09
SSU72-202ENST00000359060 SH2D6Q7Z4S9 175 aa8.25□□□□□ -1.09
SSU72-202ENST00000359060 TM2D2Q9BX73 214 aa8.25□□□□□ -1.09
SSU72-202ENST00000359060 WFDC2Q14508 124 aa8.25□□□□□ -1.09
SSU72-202ENST00000359060 LRRC75A-AS1Q8N1F1 130 aa8.25□□□□□ -1.09
SSU72-202ENST00000359060 ITPR1Q14643 2758 aa8.25□□□□□ -1.09
SSU72-202ENST00000359060 TEX48A0A1B0GUV7 120 aa8.25□□□□□ -1.09
SSU72-202ENST00000359060 CSMD1Q96PZ7 3565 aa8.24□□□□□ -1.09
SSU72-202ENST00000359060 TRAV8-3A0A0A6YYJ7 113 aa8.24□□□□□ -1.09
SSU72-202ENST00000359060 ZNF575Q86XF7 245 aa8.24□□□□□ -1.09
SSU72-202ENST00000359060 PRSS47A8MTI9 375 aa8.24□□□□□ -1.09
SSU72-202ENST00000359060 BSNQ9UPA5 3926 aa8.24□□□□□ -1.09
SSU72-202ENST00000359060 PRO1854Q9UHT4 67 aa8.23□□□□□ -1.09
SSU72-202ENST00000359060 GTSF1LQ9H1H1 148 aa8.23□□□□□ -1.09
SSU72-202ENST00000359060 HTN3P15516 51 aa8.23□□□□□ -1.09
SSU72-202ENST00000359060 FAM19A4Q96LR4 140 aa8.23□□□□□ -1.09
SSU72-202ENST00000359060 C1QTNF4Q9BXJ3 329 aa8.23□□□□□ -1.09
SSU72-202ENST00000359060 KIF25-AS1Q9Y6Z4 181 aa8.23□□□□□ -1.09
SSU72-202ENST00000359060 TRBV6-5A0A0K0K1A5 114 aa8.22□□□□□ -1.09
SSU72-202ENST00000359060 A4D1N5 150 aa8.22□□□□□ -1.09
SSU72-202ENST00000359060 IGIPA6NJ69 53 aa8.22□□□□□ -1.09
SSU72-202ENST00000359060 TSHBP01222 138 aa8.22□□□□□ -1.09
SSU72-202ENST00000359060 CMC4P56277 68 aaPredicted RBP8.22□□□□□ -1.09
SSU72-202ENST00000359060 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.22□□□□□ -1.09
SSU72-202ENST00000359060 LEPROTO15243 131 aa8.22□□□□□ -1.09
SSU72-202ENST00000359060 UTP20O75691 2785 aaKnown RBP8.22□□□□□ -1.09
SSU72-202ENST00000359060 IGLV4-3A0A075B6K6 122 aa8.22□□□□□ -1.09
SSU72-202ENST00000359060 ZNF580Q9UK33 172 aa8.22□□□□□ -1.09
SSU72-202ENST00000359060 F8W1H4 67 aa8.21□□□□□ -1.09
SSU72-202ENST00000359060 LINC00315P59091 139 aa8.21□□□□□ -1.09
SSU72-202ENST00000359060 PRIMA1Q86XR5 153 aa8.21□□□□□ -1.09
SSU72-202ENST00000359060 Q6ZTI0 123 aa8.21□□□□□ -1.09
SSU72-202ENST00000359060 C9JAW5 83 aa8.21□□□□□ -1.1
SSU72-202ENST00000359060 Q6ZUT4 128 aa8.21□□□□□ -1.1
SSU72-202ENST00000359060 MUSTN1Q8IVN3 82 aa8.21□□□□□ -1.1
SSU72-202ENST00000359060 LINC01546A6NGU7 62 aa8.21□□□□□ -1.1
SSU72-202ENST00000359060 NXPH4O95158 308 aa8.21□□□□□ -1.1
SSU72-202ENST00000359060 RNF152Q8N8N0 203 aa8.21□□□□□ -1.1
SSU72-202ENST00000359060 WFDC10AQ9H1F0 79 aa8.21□□□□□ -1.1
SSU72-202ENST00000359060 GAGE6Q13070 117 aa8.2□□□□□ -1.1
SSU72-202ENST00000359060 CFAP126Q5VTH2 177 aa8.2□□□□□ -1.1
SSU72-202ENST00000359060 SPANXA1Q9NS26 97 aa8.2□□□□□ -1.1
SSU72-202ENST00000359060 A0A0J9YY99 117 aa8.2□□□□□ -1.1
SSU72-202ENST00000359060 ZNF22P17026 224 aaPredicted RBP8.2□□□□□ -1.1
SSU72-202ENST00000359060 RBX1P62877 108 aa8.2□□□□□ -1.1
SSU72-202ENST00000359060 RPL32P62910 135 aaKnown RBP8.2□□□□□ -1.1
SSU72-202ENST00000359060 TMEM86BQ8N661 226 aa8.2□□□□□ -1.1
SSU72-202ENST00000359060 IGHV3-30-3P0DP02 117 aa8.2□□□□□ -1.1
SSU72-202ENST00000359060 C11orf68Q9H3H3 251 aaKnown RBP8.2□□□□□ -1.1
SSU72-202ENST00000359060 HELZ2Q9BYK8 2649 aaKnown RBP8.2□□□□□ -1.1
SSU72-202ENST00000359060 DAND5Q8N907 189 aa8.19□□□□□ -1.1
SSU72-202ENST00000359060 LINC00467Q9BRT7 94 aa8.19□□□□□ -1.1
SSU72-202ENST00000359060 RBMY1A1P0DJD3 496 aaKnown RBP8.19□□□□□ -1.1
SSU72-202ENST00000359060 RBMY1CP0DJD4 496 aa8.19□□□□□ -1.1
SSU72-202ENST00000359060 RPL13AP40429 203 aaKnown RBP8.19□□□□□ -1.1
SSU72-202ENST00000359060 RBMY1FQ15415 496 aaKnown RBP8.19□□□□□ -1.1
SSU72-202ENST00000359060 TMEM243Q9BU79 118 aa8.19□□□□□ -1.1
SSU72-202ENST00000359060 FLNBO75369 2602 aaKnown RBP8.19□□□□□ -1.1
SSU72-202ENST00000359060 TRBV7-3A0A075B6L6 115 aa8.18□□□□□ -1.1
SSU72-202ENST00000359060 TRAV25A0A0B4J276 109 aa8.18□□□□□ -1.1
SSU72-202ENST00000359060 ODF3L2Q3SX64 289 aa8.18□□□□□ -1.1
SSU72-202ENST00000359060 CHD6Q8TD26 2715 aa8.18□□□□□ -1.1
SSU72-202ENST00000359060 IGLV4-69A0A075B6H9 119 aa8.18□□□□□ -1.1
SSU72-202ENST00000359060 RBMY1BA6NDE4 496 aaKnown RBP8.18□□□□□ -1.1
SSU72-202ENST00000359060 RBMY1EA6NEQ0 496 aaKnown RBP8.18□□□□□ -1.1
SSU72-202ENST00000359060 RBMY1DP0C7P1 496 aaKnown RBP8.18□□□□□ -1.1
SSU72-202ENST00000359060 LINC01006Q8NI28 216 aa8.18□□□□□ -1.1
SSU72-202ENST00000359060 SIGMAR1Q99720 223 aa8.18□□□□□ -1.1
SSU72-202ENST00000359060 A0A096LPF7 62 aa8.18□□□□□ -1.1
SSU72-202ENST00000359060 A8MZ25 164 aa8.18□□□□□ -1.1
SSU72-202ENST00000359060 MORN3Q6PF18 240 aaPredicted RBP8.18□□□□□ -1.1
SSU72-202ENST00000359060 DNAJC30Q96LL9 226 aa8.18□□□□□ -1.1
SSU72-202ENST00000359060 K7EQD1 137 aa8.17□□□□□ -1.1
SSU72-202ENST00000359060 C10orf126Q8N4M7 172 aa8.17□□□□□ -1.1
SSU72-202ENST00000359060 OR13C6PQ8NH95 151 aa8.17□□□□□ -1.1
SSU72-202ENST00000359060 CFC1BP0CG36 223 aa8.17□□□□□ -1.1
SSU72-202ENST00000359060 CFC1P0CG37 223 aa8.17□□□□□ -1.1
SSU72-202ENST00000359060 Q9H8V8 135 aa8.17□□□□□ -1.1
SSU72-202ENST00000359060 NDUFA11Q86Y39 141 aa8.17□□□□□ -1.1
SSU72-202ENST00000359060 SLC25A29Q8N8R3 303 aa8.17□□□□□ -1.1
SSU72-202ENST00000359060 TSPAN13O95857 204 aa8.16□□□□□ -1.1
SSU72-202ENST00000359060 LINC00158P58513 81 aa8.16□□□□□ -1.1
SSU72-202ENST00000359060 TSPEAR-AS2P59090 65 aa8.16□□□□□ -1.1
SSU72-202ENST00000359060 TRBV20-1A0A075B6N2 111 aa8.16□□□□□ -1.1
SSU72-202ENST00000359060 TMEM223A0PJW6 202 aa8.16□□□□□ -1.1
SSU72-202ENST00000359060 UFSP1Q6NVU6 142 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms