RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 TMEM86AQ8N2M4 240 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 KLK6Q92876 244 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 MGST2Q99735 147 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 NOTCH2Q04721 2471 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 TRBV19A0A075B6N1 114 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 SMIM1B2RUZ4 78 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 PSMB3P49720 205 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 RHOAP61586 193 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 DEFA5Q01523 94 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 RTL8BQ17RB0 113 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 TMEM155Q4W5P6 130 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 OR10AG1Q8NH19 301 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 SLC25A2Q9BXI2 301 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 NAA60Q9H7X0 242 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 FLNBO75369 2602 aaKnown RBP1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 CADP27708 2225 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 KRTAP10-1P60331 282 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 HERVK_113P63121 156 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 TSTD1Q8NFU3 115 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 HIST1H4GQ99525 98 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 TMEM14BQ9NUH8 114 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 PRRC2BQ5JSZ5 2229 aaKnown RBP1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 PDE4DIPQ5VU43 2346 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 USF3Q68DE3 2245 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 DAPL1A0PJW8 107 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 KRTAP10-7P60409 375 aaPredicted RBP1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 RPS18P62269 152 aaKnown RBP1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 RPRMLQ8N4K4 120 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 MRPL20Q9BYC9 149 aaKnown RBP1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 DEFB126Q9BYW3 111 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 Q9H3A6 140 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 SOX21Q9Y651 276 aaPredicted RBP1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 IGHV1-45A0A0A0MS14 117 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 GNG7O60262 68 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 CD2P06729 351 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 LYZP61626 148 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 LYZL2Q7Z4W2 148 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 KTN1-AS1Q86SY8 53 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 ZNF625Q96I27 306 aaPredicted RBP1□□□□□ -2.25
SMARCAD1-202ENST00000359052 GON4LQ3T8J9 2241 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 A0A1W2PQD3 144 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 CLPSL1A2RUU4 121 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 MRPS36P82909 103 aaKnown RBP1□□□□□ -2.25
SMARCAD1-202ENST00000359052 TEX29Q8N6K0 151 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 PPDPFLQ8WWR9 84 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 SMIM14Q96QK8 99 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 GINS4Q9BRT9 223 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 RPS10P5Q9NQ39 176 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 BET1LQ9NYM9 111 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 PAM16Q9Y3D7 125 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 PKD1L2Q7Z442 2459 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 MEIS3P1A6NDR6 274 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 CXorf1O96002 111 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 GLRXP35754 106 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 SMAGPQ0VAQ4 97 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 PFN4Q8NHR9 129 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 CMTM2Q8TAZ6 248 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 RERGQ96A58 199 aaPredicted RBP1□□□□□ -2.25
SMARCAD1-202ENST00000359052 NPCDR1Q9BY65 106 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 OTORQ9NRC9 128 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 CDC42SE2Q9NRR3 84 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 RPUSD1Q9UJJ7 312 aaKnown RBP1□□□□□ -2.25
SMARCAD1-202ENST00000359052 SELENOKQ9Y6D0 94 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 TRAV12-2A0A075B6T6 113 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 A6NDX4 124 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 LECT2O14960 151 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 PDE6DO43924 150 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 TIMM17BO60830 172 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 SSX8Q7RTT4 187 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 Q8N9W7 124 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 CCL26Q9Y258 94 aa1□□□□□ -2.25
SMARCAD1-202ENST00000359052 IGHV3-74A0A0B4J1X5 117 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 TRAV8-2A0A0B4J237 113 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 CTXND1A0A1B0GTU2 59 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 CMC4P56277 68 aaPredicted RBP0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 LCE3CQ5T5A8 94 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 TRAPPC6BQ86SZ2 158 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 C14orf178Q8N769 122 aaPredicted RBP0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 OR51H1Q8NH63 302 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 METTL26Q96S19 204 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 K7EMI3 77 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 UBE2G1P62253 170 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 KRTAP13-2Q52LG2 175 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 Q6JHZ5 121 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 ANKRD29Q8N6D5 301 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 FAM216BQ8N7L0 139 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 ZNF714Q96N38 554 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 TMEM14CQ9P0S9 112 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 CABIN1Q9Y6J0 2220 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 IGLV1-50A0A075B6I6 118 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 IGHV1-18A0A0C4DH31 117 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 MYMXA0A1B0GTQ4 84 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 J3KT08 172 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 M0R381 172 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 KRTAP10-4P60372 401 aaPredicted RBP0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 ZNF818PQ6ZRF7 136 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 C10orf126Q8N4M7 172 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 BTF3L4Q96K17 158 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 NMNAT3Q96T66 252 aa0.99□□□□□ -2.25
SMARCAD1-202ENST00000359052 TMEM70Q9BUB7 260 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms