RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 NUPR1O60356 82 aa18.72■□□□□ 0.59
SSBP4-202ENST00000348495 COTL1Q14019 142 aa18.72■□□□□ 0.59
SSBP4-202ENST00000348495 DNAH7Q8WXX0 4024 aa18.72■□□□□ 0.59
SSBP4-202ENST00000348495 LAGE3Q14657 143 aa18.71■□□□□ 0.59
SSBP4-202ENST00000348495 TMA7Q9Y2S6 64 aaKnown RBP18.71■□□□□ 0.59
SSBP4-202ENST00000348495 FCER1GP30273 86 aa18.7■□□□□ 0.58
SSBP4-202ENST00000348495 MUC7Q8TAX7 377 aa18.69■□□□□ 0.58
SSBP4-202ENST00000348495 ESDP10768 282 aa18.69■□□□□ 0.58
SSBP4-202ENST00000348495 TIRAPP58753 221 aa18.69■□□□□ 0.58
SSBP4-202ENST00000348495 ORMDL2Q53FV1 153 aa18.69■□□□□ 0.58
SSBP4-202ENST00000348495 TMEM97Q5BJF2 176 aa18.69■□□□□ 0.58
SSBP4-202ENST00000348495 LYPD5Q6UWN5 251 aa18.69■□□□□ 0.58
SSBP4-202ENST00000348495 KLK5Q9Y337 293 aaPredicted RBP18.69■□□□□ 0.58
SSBP4-202ENST00000348495 DYNC2H1Q8NCM8 4307 aaKnown RBP18.68■□□□□ 0.58
SSBP4-202ENST00000348495 TRBV6-8A0A0A6YYG3 113 aa18.68■□□□□ 0.58
SSBP4-202ENST00000348495 CHCHD7Q9BUK0 85 aa18.68■□□□□ 0.58
SSBP4-202ENST00000348495 APLNQ9ULZ1 77 aa18.67■□□□□ 0.58
SSBP4-202ENST00000348495 CSMD3Q7Z407 3707 aa18.67■□□□□ 0.58
SSBP4-202ENST00000348495 S100A6P06703 90 aa18.66■□□□□ 0.58
SSBP4-202ENST00000348495 HSBP1O75506 76 aa18.65■□□□□ 0.58
SSBP4-202ENST00000348495 AMTP48728 403 aa18.65■□□□□ 0.58
SSBP4-202ENST00000348495 ESRGQ1W209 222 aa18.65■□□□□ 0.58
SSBP4-202ENST00000348495 A0A096LNJ9 63 aa18.64■□□□□ 0.57
SSBP4-202ENST00000348495 IGHV1-24A0A0C4DH33 117 aa18.64■□□□□ 0.57
SSBP4-202ENST00000348495 ZFAND6Q6FIF0 208 aa18.64■□□□□ 0.57
SSBP4-202ENST00000348495 TRBV25-1A0A075B6N4 114 aa18.63■□□□□ 0.57
SSBP4-202ENST00000348495 PMCHL1Q16048 86 aa18.63■□□□□ 0.57
SSBP4-202ENST00000348495 C20orf203Q8NBC4 194 aa18.63■□□□□ 0.57
SSBP4-202ENST00000348495 TCTAP57738 103 aa18.63■□□□□ 0.57
SSBP4-202ENST00000348495 C5orf52A6NGY3 159 aa18.62■□□□□ 0.57
SSBP4-202ENST00000348495 LELP1Q5T871 98 aa18.62■□□□□ 0.57
SSBP4-202ENST00000348495 FAM19A2Q8N3H0 131 aa18.62■□□□□ 0.57
SSBP4-202ENST00000348495 TMEM243Q9BU79 118 aa18.61■□□□□ 0.57
SSBP4-202ENST00000348495 SNRPEP62304 92 aaKnown RBP18.6■□□□□ 0.57
SSBP4-202ENST00000348495 HBDP02042 147 aa18.59■□□□□ 0.57
SSBP4-202ENST00000348495 C2orf66Q6UXQ4 117 aa18.59■□□□□ 0.57
SSBP4-202ENST00000348495 BTF3P20290 206 aaKnown RBP18.58■□□□□ 0.57
SSBP4-202ENST00000348495 RPL39P62891 51 aaKnown RBP18.58■□□□□ 0.57
SSBP4-202ENST00000348495 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.57■□□□□ 0.56
SSBP4-202ENST00000348495 IGKV2-29A2NJV5 120 aaPredicted RBP18.57■□□□□ 0.56
SSBP4-202ENST00000348495 G0S2P27469 103 aa18.57■□□□□ 0.56
SSBP4-202ENST00000348495 HIST3H2BBQ8N257 126 aa18.57■□□□□ 0.56
SSBP4-202ENST00000348495 TOMM6Q96B49 74 aa18.57■□□□□ 0.56
SSBP4-202ENST00000348495 CYSLTR1Q9Y271 337 aa18.57■□□□□ 0.56
SSBP4-202ENST00000348495 PDZD11Q5EBL8 140 aa18.56■□□□□ 0.56
SSBP4-202ENST00000348495 LINC00588Q9Y4M8 146 aa18.56■□□□□ 0.56
SSBP4-202ENST00000348495 H7C423 109 aa18.55■□□□□ 0.56
SSBP4-202ENST00000348495 CHCHD5Q9BSY4 110 aa18.55■□□□□ 0.56
SSBP4-202ENST00000348495 STARD9Q9P2P6 4700 aa18.54■□□□□ 0.56
SSBP4-202ENST00000348495 CCL18P55774 89 aa18.54■□□□□ 0.56
SSBP4-202ENST00000348495 TMEM18Q96B42 140 aa18.54■□□□□ 0.56
SSBP4-202ENST00000348495 MRPS16Q9Y3D3 137 aaKnown RBP18.53■□□□□ 0.56
SSBP4-202ENST00000348495 LINC01549A6NIU2 74 aa18.52■□□□□ 0.56
SSBP4-202ENST00000348495 GAGE6Q13070 117 aa18.52■□□□□ 0.56
SSBP4-202ENST00000348495 MRPL52Q86TS9 123 aaKnown RBP18.52■□□□□ 0.56
SSBP4-202ENST00000348495 PACRGQ96M98 296 aaPredicted RBP18.52■□□□□ 0.56
SSBP4-202ENST00000348495 UBE2D4Q9Y2X8 147 aa18.52■□□□□ 0.56
SSBP4-202ENST00000348495 TENM2Q9NT68 2774 aa18.52■□□□□ 0.56
SSBP4-202ENST00000348495 TRAV8-6A0A0B4J262 113 aa18.52■□□□□ 0.55
SSBP4-202ENST00000348495 C3orf84H3BNL1 204 aa18.52■□□□□ 0.55
SSBP4-202ENST00000348495 UBE2L6O14933 153 aa18.52■□□□□ 0.55
SSBP4-202ENST00000348495 CASC10Q5T4H9 136 aa18.52■□□□□ 0.55
SSBP4-202ENST00000348495 IGIPA6NJ69 53 aa18.51■□□□□ 0.55
SSBP4-202ENST00000348495 IFITM10A6NMD0 228 aa18.51■□□□□ 0.55
SSBP4-202ENST00000348495 FGF6P10767 208 aa18.51■□□□□ 0.55
SSBP4-202ENST00000348495 TIMM21Q9BVV7 248 aa18.51■□□□□ 0.55
SSBP4-202ENST00000348495 PYGO1Q9Y3Y4 419 aa18.5■□□□□ 0.55
SSBP4-202ENST00000348495 WFDC10BQ8IUB3 73 aa18.49■□□□□ 0.55
SSBP4-202ENST00000348495 SPANXA1Q9NS26 97 aa18.49■□□□□ 0.55
SSBP4-202ENST00000348495 ERASQ7Z444 233 aa18.49■□□□□ 0.55
SSBP4-202ENST00000348495 HIST1H2BLQ99880 126 aa18.49■□□□□ 0.55
SSBP4-202ENST00000348495 UPK3BQ9BT76 320 aa18.49■□□□□ 0.55
SSBP4-202ENST00000348495 CSDC2Q9Y534 153 aaKnown RBP18.49■□□□□ 0.55
SSBP4-202ENST00000348495 LEPROTL1O95214 131 aa18.48■□□□□ 0.55
SSBP4-202ENST00000348495 FAM104AQ969W3 186 aa18.48■□□□□ 0.55
SSBP4-202ENST00000348495 SCGB3A1Q96QR1 104 aa18.48■□□□□ 0.55
SSBP4-202ENST00000348495 PLECQ15149 4684 aaKnown RBP18.48■□□□□ 0.55
SSBP4-202ENST00000348495 S100A2P29034 98 aa18.47■□□□□ 0.55
SSBP4-202ENST00000348495 LINC00173Q6ZV60 143 aa18.47■□□□□ 0.55
SSBP4-202ENST00000348495 TIMM17AQ99595 171 aa18.47■□□□□ 0.55
SSBP4-202ENST00000348495 ZNF25P17030 456 aaPredicted RBP18.46■□□□□ 0.55
SSBP4-202ENST00000348495 MPV17L2Q567V2 206 aa18.46■□□□□ 0.55
SSBP4-202ENST00000348495 A0A1B0GUV1 79 aa18.46■□□□□ 0.55
SSBP4-202ENST00000348495 TMEM262E9PQX1 116 aa18.46■□□□□ 0.55
SSBP4-202ENST00000348495 FABP4P15090 132 aa18.46■□□□□ 0.55
SSBP4-202ENST00000348495 PKIAP61925 76 aa18.46■□□□□ 0.55
SSBP4-202ENST00000348495 RBX1P62877 108 aa18.45■□□□□ 0.54
SSBP4-202ENST00000348495 SMAGPQ0VAQ4 97 aa18.45■□□□□ 0.54
SSBP4-202ENST00000348495 AMMECR1LQ6DCA0 310 aa18.45■□□□□ 0.54
SSBP4-202ENST00000348495 Q8N3U1 123 aa18.45■□□□□ 0.54
SSBP4-202ENST00000348495 ATP5LO75964 103 aa18.44■□□□□ 0.54
SSBP4-202ENST00000348495 TMEM141Q96I45 108 aa18.44■□□□□ 0.54
SSBP4-202ENST00000348495 OPRPNQ99935 248 aaPredicted RBP18.44■□□□□ 0.54
SSBP4-202ENST00000348495 HSPB8Q9UJY1 196 aa18.44■□□□□ 0.54
SSBP4-202ENST00000348495 NPSP0C0P6 89 aa18.43■□□□□ 0.54
SSBP4-202ENST00000348495 Q8N976 141 aa18.43■□□□□ 0.54
SSBP4-202ENST00000348495 IGLV4-60A0A075B6I1 120 aa18.43■□□□□ 0.54
SSBP4-202ENST00000348495 IGLV4-3A0A075B6K6 122 aa18.43■□□□□ 0.54
SSBP4-202ENST00000348495 MRPS36P82909 103 aaKnown RBP18.43■□□□□ 0.54
SSBP4-202ENST00000348495 OR5A1Q8NGJ0 315 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms