RNA–Protein interactions for RNA: ENST00000342751.8

SDHC-201, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 1,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-201ENST00000342751 GFRA4Q9GZZ7 299 aa13.16□□□□□ -0.3
SDHC-201ENST00000342751 COTL1Q14019 142 aa13.15□□□□□ -0.3
SDHC-201ENST00000342751 IGKV3OR2-268A0A0C4DH90 116 aa13.14□□□□□ -0.31
SDHC-201ENST00000342751 KRTAP26-1Q6PEX3 210 aa13.14□□□□□ -0.31
SDHC-201ENST00000342751 GATCO43716 136 aaKnown RBP13.13□□□□□ -0.31
SDHC-201ENST00000342751 WDR73Q6P4I2 378 aa13.13□□□□□ -0.31
SDHC-201ENST00000342751 GATD1Q8NB37 220 aa13.13□□□□□ -0.31
SDHC-201ENST00000342751 PGLYRP4Q96LB8 373 aa13.13□□□□□ -0.31
SDHC-201ENST00000342751 FOXA3P55318 350 aaPredicted RBP13.12□□□□□ -0.31
SDHC-201ENST00000342751 BLOC1S1P78537 153 aa13.12□□□□□ -0.31
SDHC-201ENST00000342751 SMIM15Q7Z3B0 74 aa13.12□□□□□ -0.31
SDHC-201ENST00000342751 GTSF1Q8WW33 167 aa13.12□□□□□ -0.31
SDHC-201ENST00000342751 RPL39LQ96EH5 51 aaKnown RBP13.12□□□□□ -0.31
SDHC-201ENST00000342751 hDV102S1A0JD36 115 aa13.11□□□□□ -0.31
SDHC-201ENST00000342751 DGAT2L7PQ6IED9 249 aa13.1□□□□□ -0.31
SDHC-201ENST00000342751 CNFNQ9BYD5 112 aa13.1□□□□□ -0.31
SDHC-201ENST00000342751 TRAV8-4A0A0B4J246 113 aa13.09□□□□□ -0.31
SDHC-201ENST00000342751 A0A1B0GUV1 79 aa13.09□□□□□ -0.31
SDHC-201ENST00000342751 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.08□□□□□ -0.32
SDHC-201ENST00000342751 IGKV2-29A2NJV5 120 aaPredicted RBP13.08□□□□□ -0.32
SDHC-201ENST00000342751 TMEM250H0YL14 139 aa13.08□□□□□ -0.32
SDHC-201ENST00000342751 AMMECR1LQ6DCA0 310 aa13.08□□□□□ -0.32
SDHC-201ENST00000342751 C9orf163Q8N9P6 203 aa13.08□□□□□ -0.32
SDHC-201ENST00000342751 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.08□□□□□ -0.32
SDHC-201ENST00000342751 RPL37AP61513 92 aaKnown RBP13.07□□□□□ -0.32
SDHC-201ENST00000342751 RNASEKQ6P5S7 137 aaKnown RBP13.07□□□□□ -0.32
SDHC-201ENST00000342751 CLRN3Q8NCR9 226 aa13.07□□□□□ -0.32
SDHC-201ENST00000342751 EIF5A2Q9GZV4 153 aaKnown RBP13.07□□□□□ -0.32
SDHC-201ENST00000342751 AP5S1Q9NUS5 200 aa13.07□□□□□ -0.32
SDHC-201ENST00000342751 GAGE12HA6NDE8 117 aa13.06□□□□□ -0.32
SDHC-201ENST00000342751 PANO1I0J062 215 aa13.06□□□□□ -0.32
SDHC-201ENST00000342751 APCSP02743 223 aa13.06□□□□□ -0.32
SDHC-201ENST00000342751 KRTAP10-4P60372 401 aaPredicted RBP13.06□□□□□ -0.32
SDHC-201ENST00000342751 BORCS7Q96B45 105 aa13.06□□□□□ -0.32
SDHC-201ENST00000342751 A8MWL6 223 aa13.05□□□□□ -0.32
SDHC-201ENST00000342751 KRTAP29-1A8MX34 341 aaPredicted RBP13.05□□□□□ -0.32
SDHC-201ENST00000342751 SMIM7Q9BQ49 75 aa13.05□□□□□ -0.32
SDHC-201ENST00000342751 SDHAF1A6NFY7 115 aa13.04□□□□□ -0.32
SDHC-201ENST00000342751 FAM231DQ6ZW35 169 aa13.04□□□□□ -0.32
SDHC-201ENST00000342751 PMCHP20382 165 aa13.02□□□□□ -0.33
SDHC-201ENST00000342751 CNBPP62633 177 aaKnown RBP13.02□□□□□ -0.33
SDHC-201ENST00000342751 HIGD2BQ4VC39 106 aa13.02□□□□□ -0.33
SDHC-201ENST00000342751 SDIM1Q6ZPB5 146 aa13.02□□□□□ -0.33
SDHC-201ENST00000342751 LYPD6BQ8NI32 183 aa13.02□□□□□ -0.33
SDHC-201ENST00000342751 DPH3Q96FX2 82 aa13.02□□□□□ -0.33
SDHC-201ENST00000342751 IGHV3-64A0A075B6Q5 118 aa13.01□□□□□ -0.33
SDHC-201ENST00000342751 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.01□□□□□ -0.33
SDHC-201ENST00000342751 ZNF727A8MUV8 499 aa13.01□□□□□ -0.33
SDHC-201ENST00000342751 GAS8-AS1O95177 125 aa13.01□□□□□ -0.33
SDHC-201ENST00000342751 NCR2O95944 276 aa13.01□□□□□ -0.33
SDHC-201ENST00000342751 CHTF8P0CG12 524 aa13.01□□□□□ -0.33
SDHC-201ENST00000342751 FGF6P10767 208 aa13.01□□□□□ -0.33
SDHC-201ENST00000342751 TEX261Q6UWH6 196 aa13.01□□□□□ -0.33
SDHC-201ENST00000342751 SLPIP03973 132 aa13□□□□□ -0.33
SDHC-201ENST00000342751 CT83Q5H943 113 aa13□□□□□ -0.33
SDHC-201ENST00000342751 LINC01551Q86U37 167 aa13□□□□□ -0.33
SDHC-201ENST00000342751 CHCHD10Q8WYQ3 142 aaPredicted RBP13□□□□□ -0.33
SDHC-201ENST00000342751 TMEM242Q9NWH2 141 aa13□□□□□ -0.33
SDHC-201ENST00000342751 HIGD1CA8MV81 97 aa12.99□□□□□ -0.33
SDHC-201ENST00000342751 I3L3M4 83 aa12.99□□□□□ -0.33
SDHC-201ENST00000342751 C15orf56Q8N910 161 aa12.99□□□□□ -0.33
SDHC-201ENST00000342751 A0A1B0GUT8 65 aa12.98□□□□□ -0.33
SDHC-201ENST00000342751 SRP19P09132 144 aaKnown RBP12.98□□□□□ -0.33
SDHC-201ENST00000342751 TSKUQ8WUA8 353 aa12.98□□□□□ -0.33
SDHC-201ENST00000342751 FAM210AQ96ND0 272 aa12.98□□□□□ -0.33
SDHC-201ENST00000342751 ST20Q9HBF5 79 aa12.98□□□□□ -0.33
SDHC-201ENST00000342751 LRP1Q07954 4544 aaKnown RBP12.97□□□□□ -0.33
SDHC-201ENST00000342751 HNRNPA3P51991 378 aaKnown RBP12.97□□□□□ -0.33
SDHC-201ENST00000342751 CFAP161Q6P656 301 aa12.97□□□□□ -0.33
SDHC-201ENST00000342751 BTF3L4Q96K17 158 aa12.97□□□□□ -0.33
SDHC-201ENST00000342751 PKHD1L1Q86WI1 4243 aa12.97□□□□□ -0.33
SDHC-201ENST00000342751 TMEM101Q96IK0 257 aa12.96□□□□□ -0.33
SDHC-201ENST00000342751 FAT3Q8TDW7 4589 aa12.96□□□□□ -0.34
SDHC-201ENST00000342751 FAM231BA6NCW3 169 aa12.95□□□□□ -0.34
SDHC-201ENST00000342751 SMKR1H3BMG3 65 aa12.95□□□□□ -0.34
SDHC-201ENST00000342751 H7C423 109 aa12.95□□□□□ -0.34
SDHC-201ENST00000342751 TSHBP01222 138 aa12.95□□□□□ -0.34
SDHC-201ENST00000342751 RPS10P46783 165 aaKnown RBP12.95□□□□□ -0.34
SDHC-201ENST00000342751 XCL1P47992 114 aa12.95□□□□□ -0.34
SDHC-201ENST00000342751 AMN1Q8IY45 258 aa12.95□□□□□ -0.34
SDHC-201ENST00000342751 OSTCQ9NRP0 149 aa12.95□□□□□ -0.34
SDHC-201ENST00000342751 TRBV6-5A0A0K0K1A5 114 aa12.94□□□□□ -0.34
SDHC-201ENST00000342751 A0A1B0GVG6 124 aa12.94□□□□□ -0.34
SDHC-201ENST00000342751 OR5A1Q8NGJ0 315 aa12.94□□□□□ -0.34
SDHC-201ENST00000342751 MRAP2Q96G30 205 aa12.94□□□□□ -0.34
SDHC-201ENST00000342751 RNF185Q96GF1 192 aa12.94□□□□□ -0.34
SDHC-201ENST00000342751 TMEM191AQ9H0A3 160 aa12.94□□□□□ -0.34
SDHC-201ENST00000342751 ZNF25P17030 456 aaPredicted RBP12.93□□□□□ -0.34
SDHC-201ENST00000342751 A0A087WYN8 130 aa12.92□□□□□ -0.34
SDHC-201ENST00000342751 IGKV2-24A0A0C4DH68 120 aa12.92□□□□□ -0.34
SDHC-201ENST00000342751 OXTP01178 125 aa12.92□□□□□ -0.34
SDHC-201ENST00000342751 RAB4AP20338 218 aa12.92□□□□□ -0.34
SDHC-201ENST00000342751 COX6A2Q02221 97 aa12.92□□□□□ -0.34
SDHC-201ENST00000342751 RIGQ13278 110 aa12.92□□□□□ -0.34
SDHC-201ENST00000342751 ADIRFQ15847 76 aa12.92□□□□□ -0.34
SDHC-201ENST00000342751 SPACA4Q8TDM5 124 aa12.92□□□□□ -0.34
SDHC-201ENST00000342751 V9GYV3 84 aa12.92□□□□□ -0.34
SDHC-201ENST00000342751 CCL25O15444 150 aa12.91□□□□□ -0.34
SDHC-201ENST00000342751 FOXI1Q12951 378 aa12.91□□□□□ -0.34
SDHC-201ENST00000342751 CIRBPQ14011 172 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms