RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 Q6ZSV7 163 aa10.32□□□□□ -0.76
SF1-202ENST00000334944 C18orf65Q6ZTR6 163 aa10.32□□□□□ -0.76
SF1-202ENST00000334944 ADARB2-AS1A8MUL3 147 aa10.31□□□□□ -0.76
SF1-202ENST00000334944 HERVK_113P61574 105 aa10.31□□□□□ -0.76
SF1-202ENST00000334944 A0A087WWL8 130 aa10.31□□□□□ -0.76
SF1-202ENST00000334944 FAM236AA0A1B0GUQ0 79 aa10.31□□□□□ -0.76
SF1-202ENST00000334944 FAM236BA0A1B0GV22 79 aa10.31□□□□□ -0.76
SF1-202ENST00000334944 H3BUA1 57 aa10.31□□□□□ -0.76
SF1-202ENST00000334944 RNASE3P12724 160 aaKnown RBP10.31□□□□□ -0.76
SF1-202ENST00000334944 H3BMM0 161 aa10.3□□□□□ -0.76
SF1-202ENST00000334944 DCANP1Q8TF63 244 aa10.3□□□□□ -0.76
SF1-202ENST00000334944 UBE2WQ96B02 151 aa10.3□□□□□ -0.76
SF1-202ENST00000334944 MDFICQ9P1T7 246 aa10.3□□□□□ -0.76
SF1-202ENST00000334944 A0A096LNT2 108 aa10.3□□□□□ -0.76
SF1-202ENST00000334944 NPC2P61916 151 aa10.3□□□□□ -0.76
SF1-202ENST00000334944 C2orf82Q6UX34 121 aa10.3□□□□□ -0.76
SF1-202ENST00000334944 JMJD1CQ15652 2540 aa10.3□□□□□ -0.76
SF1-202ENST00000334944 TRGV11A0A075B6L2 103 aa10.3□□□□□ -0.76
SF1-202ENST00000334944 MUSTN1Q8IVN3 82 aa10.3□□□□□ -0.76
SF1-202ENST00000334944 IGLV4-69A0A075B6H9 119 aa10.29□□□□□ -0.76
SF1-202ENST00000334944 IGHV4OR15-8A0A075B7B6 117 aa10.29□□□□□ -0.76
SF1-202ENST00000334944 A0A087WW49 117 aa10.29□□□□□ -0.76
SF1-202ENST00000334944 HTN1P15515 57 aa10.29□□□□□ -0.76
SF1-202ENST00000334944 HIST2H2BCQ6DN03 193 aa10.29□□□□□ -0.76
SF1-202ENST00000334944 SLC25A29Q8N8R3 303 aa10.29□□□□□ -0.76
SF1-202ENST00000334944 OPRPNQ99935 248 aaPredicted RBP10.29□□□□□ -0.76
SF1-202ENST00000334944 ZNF580Q9UK33 172 aa10.29□□□□□ -0.76
SF1-202ENST00000334944 ORMDL2Q53FV1 153 aa10.29□□□□□ -0.76
SF1-202ENST00000334944 FAM74A4Q5TZK3 123 aa10.29□□□□□ -0.76
SF1-202ENST00000334944 TENM4Q6N022 2769 aa10.28□□□□□ -0.76
SF1-202ENST00000334944 LGALS9O00182 355 aa10.28□□□□□ -0.76
SF1-202ENST00000334944 TSHBP01222 138 aa10.28□□□□□ -0.76
SF1-202ENST00000334944 Q6Q795 121 aa10.28□□□□□ -0.76
SF1-202ENST00000334944 CLEC2BQ92478 149 aa10.28□□□□□ -0.76
SF1-202ENST00000334944 SPINK13Q1W4C9 94 aa10.28□□□□□ -0.76
SF1-202ENST00000334944 ZNF843Q8N446 348 aa10.28□□□□□ -0.76
SF1-202ENST00000334944 TP53TG1Q9Y2A0 90 aa10.28□□□□□ -0.76
SF1-202ENST00000334944 LENEPQ9Y5L5 61 aa10.28□□□□□ -0.76
SF1-202ENST00000334944 TRIAP1O43715 76 aa10.27□□□□□ -0.76
SF1-202ENST00000334944 PRM2P04554 102 aa10.27□□□□□ -0.76
SF1-202ENST00000334944 KHDC1LQ5JSQ8 128 aa10.27□□□□□ -0.76
SF1-202ENST00000334944 C9orf153Q5TBE3 101 aa10.27□□□□□ -0.76
SF1-202ENST00000334944 TMEM263Q8WUH6 116 aaKnown RBP10.27□□□□□ -0.76
SF1-202ENST00000334944 CR1P17927 2039 aa10.27□□□□□ -0.76
SF1-202ENST00000334944 IGHV4-4A0A075B6R2 117 aa10.27□□□□□ -0.77
SF1-202ENST00000334944 F5H697 171 aa10.27□□□□□ -0.77
SF1-202ENST00000334944 ZNRF2Q8NHG8 242 aa10.27□□□□□ -0.77
SF1-202ENST00000334944 FAM19A4Q96LR4 140 aa10.27□□□□□ -0.77
SF1-202ENST00000334944 DSCR9P59020 149 aa10.27□□□□□ -0.77
SF1-202ENST00000334944 ATXN8Q156A1 80 aa10.27□□□□□ -0.77
SF1-202ENST00000334944 DPH3P1Q9H4G8 78 aa10.27□□□□□ -0.77
SF1-202ENST00000334944 ITPR2Q14571 2701 aa10.26□□□□□ -0.77
SF1-202ENST00000334944 J3QQQ9 107 aa10.26□□□□□ -0.77
SF1-202ENST00000334944 PRSS2P07478 247 aa10.26□□□□□ -0.77
SF1-202ENST00000334944 LGALS3P17931 250 aaKnown RBP10.26□□□□□ -0.77
SF1-202ENST00000334944 PMVKQ15126 192 aa10.26□□□□□ -0.77
SF1-202ENST00000334944 IGHV4-31P0DP07 118 aa10.26□□□□□ -0.77
SF1-202ENST00000334944 HOXD3P31249 432 aaPredicted RBP10.26□□□□□ -0.77
SF1-202ENST00000334944 SLURP1P55000 103 aa10.25□□□□□ -0.77
SF1-202ENST00000334944 C11orf44Q8N8P7 122 aa10.25□□□□□ -0.77
SF1-202ENST00000334944 NOTCH2Q04721 2471 aa10.25□□□□□ -0.77
SF1-202ENST00000334944 EDA2RQ9HAV5 297 aa10.25□□□□□ -0.77
SF1-202ENST00000334944 C2CD3Q4AC94 2353 aa10.25□□□□□ -0.77
SF1-202ENST00000334944 Q96MF0 132 aa10.25□□□□□ -0.77
SF1-202ENST00000334944 ZNF702PQ9H963 129 aa10.25□□□□□ -0.77
SF1-202ENST00000334944 TRBV10-2A0A0K0K1G8 114 aa10.24□□□□□ -0.77
SF1-202ENST00000334944 H7C423 109 aa10.24□□□□□ -0.77
SF1-202ENST00000334944 AMELXQ99217 191 aa10.24□□□□□ -0.77
SF1-202ENST00000334944 KLLNB2CW77 178 aa10.24□□□□□ -0.77
SF1-202ENST00000334944 FAM19A5Q7Z5A7 132 aaPredicted RBP10.24□□□□□ -0.77
SF1-202ENST00000334944 NACAE9PAV3 2078 aa10.23□□□□□ -0.77
SF1-202ENST00000334944 K7EMT4 169 aa10.23□□□□□ -0.77
SF1-202ENST00000334944 HERVK_113P63121 156 aa10.23□□□□□ -0.77
SF1-202ENST00000334944 TMEM126AQ9H061 195 aa10.23□□□□□ -0.77
SF1-202ENST00000334944 KNCNA6PVL3 124 aa10.23□□□□□ -0.77
SF1-202ENST00000334944 RS1O15537 224 aa10.22□□□□□ -0.77
SF1-202ENST00000334944 SNRPD3P62318 126 aaKnown RBP10.22□□□□□ -0.77
SF1-202ENST00000334944 HELZ2Q9BYK8 2649 aaKnown RBP10.22□□□□□ -0.77
SF1-202ENST00000334944 TRAV8-3A0A0A6YYJ7 113 aa10.22□□□□□ -0.77
SF1-202ENST00000334944 Q6YL49 198 aa10.22□□□□□ -0.77
SF1-202ENST00000334944 A0A0J9YX75 114 aa10.21□□□□□ -0.77
SF1-202ENST00000334944 SMIM9A6NGZ8 99 aa10.21□□□□□ -0.77
SF1-202ENST00000334944 RPL13AP40429 203 aaKnown RBP10.21□□□□□ -0.77
SF1-202ENST00000334944 LINC00315P59091 139 aa10.21□□□□□ -0.78
SF1-202ENST00000334944 C5orf47Q569G3 176 aa10.21□□□□□ -0.78
SF1-202ENST00000334944 SUMO4Q6EEV6 95 aa10.21□□□□□ -0.78
SF1-202ENST00000334944 DNAJC30Q96LL9 226 aa10.21□□□□□ -0.78
SF1-202ENST00000334944 ZNF256Q9Y2P7 627 aaPredicted RBP10.21□□□□□ -0.78
SF1-202ENST00000334944 IGHV3-73A0A0B4J1V6 119 aa10.2□□□□□ -0.78
SF1-202ENST00000334944 K7EQG2 157 aa10.2□□□□□ -0.78
SF1-202ENST00000334944 APRG1Q8IVJ8 170 aa10.2□□□□□ -0.78
SF1-202ENST00000334944 NDUFA7O95182 113 aa10.2□□□□□ -0.78
SF1-202ENST00000334944 AKAP9Q99996 3911 aa10.2□□□□□ -0.78
SF1-202ENST00000334944 DEFB113Q30KQ7 82 aa10.2□□□□□ -0.78
SF1-202ENST00000334944 KIF25-AS1Q9Y6Z4 181 aa10.2□□□□□ -0.78
SF1-202ENST00000334944 J3QLI3 93 aa10.19□□□□□ -0.78
SF1-202ENST00000334944 P0DMU3 169 aa10.19□□□□□ -0.78
SF1-202ENST00000334944 FAM231AP0DMU4 169 aa10.19□□□□□ -0.78
SF1-202ENST00000334944 FAM231CP0DMU5 169 aa10.19□□□□□ -0.78
SF1-202ENST00000334944 DEFB131AP59861 70 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms