RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 PMAIP1Q13794 54 aa7.41□□□□□ -1.22
COL4A6-201ENST00000334504 IGFL3Q6UXB1 125 aa7.41□□□□□ -1.22
COL4A6-201ENST00000334504 HELZP42694 1942 aaKnown RBP7.41□□□□□ -1.22
COL4A6-201ENST00000334504 CCKP06307 115 aa7.41□□□□□ -1.22
COL4A6-201ENST00000334504 SOSTDC1Q6X4U4 206 aa7.41□□□□□ -1.22
COL4A6-201ENST00000334504 SERP1Q9Y6X1 66 aa7.41□□□□□ -1.22
COL4A6-201ENST00000334504 NLRC5Q86WI3 1866 aa7.4□□□□□ -1.22
COL4A6-201ENST00000334504 A0A0J9YX75 114 aa7.4□□□□□ -1.22
COL4A6-201ENST00000334504 UNQ9165/PRO28630Q6UXU0 137 aa7.4□□□□□ -1.22
COL4A6-201ENST00000334504 C1orf158Q8N1D5 194 aa7.4□□□□□ -1.22
COL4A6-201ENST00000334504 LINC00269Q8N2A0 174 aa7.4□□□□□ -1.22
COL4A6-201ENST00000334504 M0R2N4 97 aa7.4□□□□□ -1.22
COL4A6-201ENST00000334504 DCANP1Q8TF63 244 aa7.4□□□□□ -1.22
COL4A6-201ENST00000334504 MRPS36P82909 103 aaKnown RBP7.4□□□□□ -1.23
COL4A6-201ENST00000334504 WFDC13Q8IUB5 93 aa7.4□□□□□ -1.23
COL4A6-201ENST00000334504 U3KQK5 164 aa7.4□□□□□ -1.23
COL4A6-201ENST00000334504 ROS1P08922 2347 aa7.4□□□□□ -1.23
COL4A6-201ENST00000334504 H7C423 109 aa7.4□□□□□ -1.23
COL4A6-201ENST00000334504 FAM19A5Q7Z5A7 132 aaPredicted RBP7.4□□□□□ -1.23
COL4A6-201ENST00000334504 USF3Q68DE3 2245 aa7.39□□□□□ -1.23
COL4A6-201ENST00000334504 LST1O00453 97 aa7.39□□□□□ -1.23
COL4A6-201ENST00000334504 TRBV10-1A0A0K0K1A3 114 aa7.39□□□□□ -1.23
COL4A6-201ENST00000334504 VWA8A3KMH1 1905 aa7.39□□□□□ -1.23
COL4A6-201ENST00000334504 NACAE9PAV3 2078 aa7.39□□□□□ -1.23
COL4A6-201ENST00000334504 CSDC2Q9Y534 153 aaKnown RBP7.39□□□□□ -1.23
COL4A6-201ENST00000334504 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.39□□□□□ -1.232e-8■■■■■ 31.6
COL4A6-201ENST00000334504 IGKV2-24A0A0C4DH68 120 aa7.39□□□□□ -1.23
COL4A6-201ENST00000334504 REG3AQ06141 175 aa7.39□□□□□ -1.23
COL4A6-201ENST00000334504 FAM19A1Q7Z5A9 133 aa7.39□□□□□ -1.23
COL4A6-201ENST00000334504 RNF185Q96GF1 192 aa7.39□□□□□ -1.23
COL4A6-201ENST00000334504 A8MZ25 164 aa7.38□□□□□ -1.23
COL4A6-201ENST00000334504 MIFP14174 115 aa7.38□□□□□ -1.23
COL4A6-201ENST00000334504 IBA57-AS1B1ANH7 110 aa7.38□□□□□ -1.23
COL4A6-201ENST00000334504 C6orf99Q4VX62 202 aa7.38□□□□□ -1.23
COL4A6-201ENST00000334504 Q6JHZ5 121 aa7.38□□□□□ -1.23
COL4A6-201ENST00000334504 DEFB135Q30KP9 77 aa7.38□□□□□ -1.23
COL4A6-201ENST00000334504 NCKAP5O14513 1909 aa7.38□□□□□ -1.23
COL4A6-201ENST00000334504 GPR179Q6PRD1 2367 aa7.38□□□□□ -1.23
COL4A6-201ENST00000334504 RLFQ13129 1914 aa7.38□□□□□ -1.23
COL4A6-201ENST00000334504 CHCHD10Q8WYQ3 142 aaPredicted RBP7.38□□□□□ -1.23
COL4A6-201ENST00000334504 DYSFO75923 2080 aa7.38□□□□□ -1.23
COL4A6-201ENST00000334504 C22orf34Q6ZV56 151 aa7.38□□□□□ -1.23
COL4A6-201ENST00000334504 LINC00526Q96FQ7 95 aa7.38□□□□□ -1.23
COL4A6-201ENST00000334504 PLXNA2O75051 1894 aa7.37□□□□□ -1.23
COL4A6-201ENST00000334504 OBSL1O75147 1896 aa7.37□□□□□ -1.23
COL4A6-201ENST00000334504 WNK2Q9Y3S1 2297 aa7.37□□□□□ -1.23
COL4A6-201ENST00000334504 IGHV4-61A0A0C4DH41 118 aa7.37□□□□□ -1.23
COL4A6-201ENST00000334504 P0C879 139 aa7.37□□□□□ -1.23
COL4A6-201ENST00000334504 PRO0255Q9UI72 69 aa7.37□□□□□ -1.23
COL4A6-201ENST00000334504 TRBV6-5A0A0K0K1A5 114 aa7.37□□□□□ -1.23
COL4A6-201ENST00000334504 PLA2G2CQ5R387 149 aa7.37□□□□□ -1.23
COL4A6-201ENST00000334504 ZNF295-AS1Q8N0V1 137 aa7.37□□□□□ -1.23
COL4A6-201ENST00000334504 LY6G6CO95867 125 aa7.36□□□□□ -1.23
COL4A6-201ENST00000334504 Q8N7P7 452 aa7.36□□□□□ -1.23
COL4A6-201ENST00000334504 CRIP1P50238 77 aa7.36□□□□□ -1.23
COL4A6-201ENST00000334504 Q6ZTI0 123 aa7.36□□□□□ -1.23
COL4A6-201ENST00000334504 ARHGAP21Q5T5U3 1957 aa7.36□□□□□ -1.23
COL4A6-201ENST00000334504 IGF1P05019 195 aa7.36□□□□□ -1.23
COL4A6-201ENST00000334504 MAP6D1Q9H9H5 199 aa7.36□□□□□ -1.23
COL4A6-201ENST00000334504 EBI3Q14213 229 aa7.35□□□□□ -1.23
COL4A6-201ENST00000334504 Q6ZS46 218 aa7.35□□□□□ -1.23
COL4A6-201ENST00000334504 Q8N9L7 120 aa7.35□□□□□ -1.23
COL4A6-201ENST00000334504 INAFM1C9JVW0 142 aa7.35□□□□□ -1.23
COL4A6-201ENST00000334504 IGHV4-30-4P0DP06 118 aa7.35□□□□□ -1.23
COL4A6-201ENST00000334504 IGHV4-31P0DP07 118 aa7.35□□□□□ -1.23
COL4A6-201ENST00000334504 C4orf3Q8WVX3 66 aa7.35□□□□□ -1.23
COL4A6-201ENST00000334504 IGLV1-47P01700 117 aa7.35□□□□□ -1.23
COL4A6-201ENST00000334504 SMIM11BQ8TCY0 68 aa7.35□□□□□ -1.23
COL4A6-201ENST00000334504 CCDC140Q96MF4 163 aa7.35□□□□□ -1.23
COL4A6-201ENST00000334504 XAGE1AQ9HD64 81 aa7.35□□□□□ -1.23
COL4A6-201ENST00000334504 IGLV2-18A0A075B6J9 118 aa7.34□□□□□ -1.23
COL4A6-201ENST00000334504 POM121L12Q8N7R1 296 aa7.34□□□□□ -1.23
COL4A6-201ENST00000334504 KIF26AQ9ULI4 1882 aaPredicted RBP7.34□□□□□ -1.23
COL4A6-201ENST00000334504 SMAD5-AS1Q9Y6J3 95 aa7.34□□□□□ -1.23
COL4A6-201ENST00000334504 NANOS2P60321 138 aaKnown RBP7.34□□□□□ -1.23
COL4A6-201ENST00000334504 C9orf85Q96MD7 179 aa7.34□□□□□ -1.23
COL4A6-201ENST00000334504 PKDREJQ9NTG1 2253 aa7.34□□□□□ -1.23
COL4A6-201ENST00000334504 TRAV7A0A075B6U4 112 aa7.34□□□□□ -1.23
COL4A6-201ENST00000334504 FAM222AQ5U5X8 452 aa7.34□□□□□ -1.24
COL4A6-201ENST00000334504 Q6ZQY7 126 aa7.34□□□□□ -1.24
COL4A6-201ENST00000334504 LOC107984640A0A0U1RRK4 108 aa7.33□□□□□ -1.24
COL4A6-201ENST00000334504 M0QY20 66 aa7.33□□□□□ -1.24
COL4A6-201ENST00000334504 CELA1Q9UNI1 258 aa7.33□□□□□ -1.24
COL4A6-201ENST00000334504 TANC1Q9C0D5 1861 aa7.33□□□□□ -1.24
COL4A6-201ENST00000334504 Q8N976 141 aa7.33□□□□□ -1.24
COL4A6-201ENST00000334504 A0A087WVE0 104 aa7.33□□□□□ -1.24
COL4A6-201ENST00000334504 PROK1P58294 105 aa7.33□□□□□ -1.24
COL4A6-201ENST00000334504 BRWD1-AS2P59051 145 aa7.33□□□□□ -1.24
COL4A6-201ENST00000334504 WFDC10AQ9H1F0 79 aa7.32□□□□□ -1.24
COL4A6-201ENST00000334504 PCNX1Q96RV3 2341 aa7.32□□□□□ -1.24
COL4A6-201ENST00000334504 ODF3Q96PU9 254 aa7.32□□□□□ -1.24
COL4A6-201ENST00000334504 PSPHP1O15172 72 aa7.31□□□□□ -1.24
COL4A6-201ENST00000334504 CACNA1HO95180 2353 aa7.31□□□□□ -1.24
COL4A6-201ENST00000334504 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.31□□□□□ -1.24
COL4A6-201ENST00000334504 PIP4P1Q86T03 277 aa7.31□□□□□ -1.24
COL4A6-201ENST00000334504 Q6ZPA2 131 aa7.31□□□□□ -1.24
COL4A6-201ENST00000334504 NRACQ8N912 160 aa7.31□□□□□ -1.24
COL4A6-201ENST00000334504 PPDPFQ9H3Y8 114 aa7.31□□□□□ -1.24
COL4A6-201ENST00000334504 A0A087WZ39 114 aa7.3□□□□□ -1.24
COL4A6-201ENST00000334504 TMEM89A2RUT3 159 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms