RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 IGHV4-38-2P0DP08 117 aa9.65□□□□□ -0.86
FN1-201ENST00000323926 CITED2Q99967 270 aaPredicted RBP9.65□□□□□ -0.86
FN1-201ENST00000323926 FAM236AA0A1B0GUQ0 79 aa9.65□□□□□ -0.87
FN1-201ENST00000323926 FAM236BA0A1B0GV22 79 aa9.65□□□□□ -0.87
FN1-201ENST00000323926 C20orf203Q8NBC4 194 aa9.65□□□□□ -0.87
FN1-201ENST00000323926 SPRY4Q9C004 299 aa9.64□□□□□ -0.87
FN1-201ENST00000323926 C19orf71A6NCJ1 209 aa9.64□□□□□ -0.87
FN1-201ENST00000323926 TDRG1Q3Y452 100 aa9.64□□□□□ -0.87
FN1-201ENST00000323926 CEP295Q9C0D2 2601 aa9.64□□□□□ -0.87
FN1-201ENST00000323926 A0A0J9YY99 117 aa9.64□□□□□ -0.87
FN1-201ENST00000323926 CCDC140Q96MF4 163 aa9.64□□□□□ -0.87
FN1-201ENST00000323926 MAPK1IP1LQ8NDC0 245 aa9.63□□□□□ -0.87
FN1-201ENST00000323926 C7orf33Q8WU49 177 aa9.63□□□□□ -0.87
FN1-201ENST00000323926 SIRPDQ9H106 197 aa9.63□□□□□ -0.87
FN1-201ENST00000323926 C14orf132Q9NPU4 83 aa9.63□□□□□ -0.87
FN1-201ENST00000323926 DEFB136Q30KP8 78 aa9.63□□□□□ -0.87
FN1-201ENST00000323926 FOXI1Q12951 378 aa9.63□□□□□ -0.87
FN1-201ENST00000323926 GTSF1Q8WW33 167 aa9.63□□□□□ -0.87
FN1-201ENST00000323926 ODF3BA8MYP8 253 aa9.63□□□□□ -0.87
FN1-201ENST00000323926 FAM222AQ5U5X8 452 aa9.63□□□□□ -0.87
FN1-201ENST00000323926 ADORA2A-AS1P86434 159 aa9.62□□□□□ -0.87
FN1-201ENST00000323926 ZFAND2AQ8N6M9 145 aa9.62□□□□□ -0.87
FN1-201ENST00000323926 BPY2O14599 106 aa9.62□□□□□ -0.87
FN1-201ENST00000323926 P0DMU3 169 aa9.62□□□□□ -0.87
FN1-201ENST00000323926 FAM231AP0DMU4 169 aa9.62□□□□□ -0.87
FN1-201ENST00000323926 FAM231CP0DMU5 169 aa9.62□□□□□ -0.87
FN1-201ENST00000323926 DIAPH2-AS1Q14236 149 aa9.62□□□□□ -0.87
FN1-201ENST00000323926 C17orf77Q96MU5 243 aa9.62□□□□□ -0.87
FN1-201ENST00000323926 F8WDY8 70 aa9.62□□□□□ -0.87
FN1-201ENST00000323926 RNF185Q96GF1 192 aa9.62□□□□□ -0.87
FN1-201ENST00000323926 DHRS4-AS1Q9P1J3 65 aa9.62□□□□□ -0.87
FN1-201ENST00000323926 POLQO75417 2590 aa9.62□□□□□ -0.87
FN1-201ENST00000323926 A6NDX4 124 aa9.62□□□□□ -0.87
FN1-201ENST00000323926 APRG1Q8IVJ8 170 aa9.62□□□□□ -0.87
FN1-201ENST00000323926 UQCRQO14949 82 aa9.61□□□□□ -0.87
FN1-201ENST00000323926 IGHV3-30-3P0DP02 117 aa9.61□□□□□ -0.87
FN1-201ENST00000323926 BLCAPP62952 87 aa9.61□□□□□ -0.87
FN1-201ENST00000323926 RNASE13Q5GAN3 156 aaKnown RBP9.61□□□□□ -0.87
FN1-201ENST00000323926 SHISA2Q6UWI4 295 aa9.61□□□□□ -0.87
FN1-201ENST00000323926 PYGO1Q9Y3Y4 419 aa9.61□□□□□ -0.87
FN1-201ENST00000323926 ODF3L1Q8IXM7 274 aa9.61□□□□□ -0.87
FN1-201ENST00000323926 CLUHP3Q96NS8 147 aa9.61□□□□□ -0.87
FN1-201ENST00000323926 MAP6D1Q9H9H5 199 aa9.6□□□□□ -0.87
FN1-201ENST00000323926 TRBV6-4A0A1B0GX49 114 aa9.6□□□□□ -0.87
FN1-201ENST00000323926 MIR7-3HGQ8N6C7 128 aa9.6□□□□□ -0.87
FN1-201ENST00000323926 A0A1B0GXF2 115 aa9.6□□□□□ -0.87
FN1-201ENST00000323926 LYPD6Q86Y78 171 aa9.6□□□□□ -0.87
FN1-201ENST00000323926 SPTSSBQ8NFR3 76 aa9.6□□□□□ -0.87
FN1-201ENST00000323926 DEFB104AQ8WTQ1 72 aa9.6□□□□□ -0.87
FN1-201ENST00000323926 CASC2Q6XLA1 102 aa9.6□□□□□ -0.87
FN1-201ENST00000323926 DNAJC9-AS1A6NH13 148 aa9.59□□□□□ -0.87
FN1-201ENST00000323926 USP17L23D6RBM5 183 aa9.59□□□□□ -0.87
FN1-201ENST00000323926 P0C879 139 aa9.59□□□□□ -0.87
FN1-201ENST00000323926 KLK12Q9UKR0 248 aa9.59□□□□□ -0.87
FN1-201ENST00000323926 DEFB135Q30KP9 77 aa9.59□□□□□ -0.87
FN1-201ENST00000323926 A0A096LPF7 62 aa9.59□□□□□ -0.87
FN1-201ENST00000323926 H0Y9J4 135 aa9.59□□□□□ -0.87
FN1-201ENST00000323926 LECT2O14960 151 aa9.59□□□□□ -0.87
FN1-201ENST00000323926 EBI3Q14213 229 aa9.59□□□□□ -0.87
FN1-201ENST00000323926 A0A0J9YXV3 536 aa9.58□□□□□ -0.88
FN1-201ENST00000323926 PRORYQ9H606 182 aa9.58□□□□□ -0.88
FN1-201ENST00000323926 Q6YL49 198 aa9.58□□□□□ -0.88
FN1-201ENST00000323926 IGLV10-54A0A075B6I4 117 aa9.58□□□□□ -0.88
FN1-201ENST00000323926 G3V4G9 280 aa9.58□□□□□ -0.88
FN1-201ENST00000323926 CRYGBP07316 175 aa9.58□□□□□ -0.88
FN1-201ENST00000323926 SELENOKQ9Y6D0 94 aa9.57□□□□□ -0.88
FN1-201ENST00000323926 REG3AQ06141 175 aa9.57□□□□□ -0.88
FN1-201ENST00000323926 RNF183Q96D59 192 aa9.57□□□□□ -0.88
FN1-201ENST00000323926 BPTFQ12830 3046 aa9.57□□□□□ -0.88
FN1-201ENST00000323926 IGLV2-14P01704 120 aa9.57□□□□□ -0.88
FN1-201ENST00000323926 MRPS36P82909 103 aaKnown RBP9.57□□□□□ -0.88
FN1-201ENST00000323926 CRYGDP07320 174 aa9.57□□□□□ -0.88
FN1-201ENST00000323926 IGKV4-1P06312 121 aa9.56□□□□□ -0.88
FN1-201ENST00000323926 C5orf47Q569G3 176 aa9.56□□□□□ -0.88
FN1-201ENST00000323926 WT1P19544 449 aaPredicted RBP9.56□□□□□ -0.88
FN1-201ENST00000323926 TP73-AS1Q9UF72 201 aa9.56□□□□□ -0.88
FN1-201ENST00000323926 Q6ZUT4 128 aa9.56□□□□□ -0.88
FN1-201ENST00000323926 K7EQG2 157 aa9.55□□□□□ -0.88
FN1-201ENST00000323926 U3KQK5 164 aa9.55□□□□□ -0.88
FN1-201ENST00000323926 PATE2Q6UY27 113 aa9.55□□□□□ -0.88
FN1-201ENST00000323926 PRR31Q5SQ13 230 aa9.55□□□□□ -0.88
FN1-201ENST00000323926 Q8N7P7 452 aa9.55□□□□□ -0.88
FN1-201ENST00000323926 TRBV30A0A0K0K1B3 111 aa9.55□□□□□ -0.88
FN1-201ENST00000323926 IGHV3-30P01768 117 aa9.55□□□□□ -0.88
FN1-201ENST00000323926 IGHV3-33P01772 117 aa9.55□□□□□ -0.88
FN1-201ENST00000323926 IGHV3-30-5P0DP03 117 aa9.55□□□□□ -0.88
FN1-201ENST00000323926 GATA1P15976 413 aaPredicted RBP9.54□□□□□ -0.88
FN1-201ENST00000323926 RPL39P62891 51 aaKnown RBP9.54□□□□□ -0.88
FN1-201ENST00000323926 LINC00322Q6ZN03 302 aaPredicted RBP9.54□□□□□ -0.88
FN1-201ENST00000323926 COL4A3Q01955 1670 aa9.54□□□□□ -0.88
FN1-201ENST00000323926 TRBV27A0A0K0K1C4 114 aa9.54□□□□□ -0.88
FN1-201ENST00000323926 CDPF1Q6NVV7 123 aa9.54□□□□□ -0.88
FN1-201ENST00000323926 TRBV6-5A0A0K0K1A5 114 aa9.54□□□□□ -0.88
FN1-201ENST00000323926 CHCHD7Q9BUK0 85 aa9.54□□□□□ -0.88
FN1-201ENST00000323926 RS1O15537 224 aa9.54□□□□□ -0.88
FN1-201ENST00000323926 FXYD2P54710 66 aa9.53□□□□□ -0.88
FN1-201ENST00000323926 TCL1BO95988 128 aa9.53□□□□□ -0.88
FN1-201ENST00000323926 TRBV6-8A0A0A6YYG3 113 aa9.53□□□□□ -0.88
FN1-201ENST00000323926 TRAV10A0A0B4J240 114 aa9.53□□□□□ -0.88
FN1-201ENST00000323926 B5MCH6 92 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms