RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 CMC4P56277 68 aaPredicted RBP5.47□□□□□ -1.53
IFT88-201ENST00000319980 SEC11AP67812 179 aa5.47□□□□□ -1.53
IFT88-201ENST00000319980 CHAC1Q9BUX1 264 aa5.47□□□□□ -1.53
IFT88-201ENST00000319980 IGLV4-69A0A075B6H9 119 aa5.47□□□□□ -1.53
IFT88-201ENST00000319980 C11orf86A6NJI1 115 aa5.47□□□□□ -1.53
IFT88-201ENST00000319980 RHODO00212 210 aa5.47□□□□□ -1.53
IFT88-201ENST00000319980 BEAN1Q3B7T3 259 aa5.47□□□□□ -1.53
IFT88-201ENST00000319980 NDUFA11Q86Y39 141 aa5.47□□□□□ -1.53
IFT88-201ENST00000319980 RNASE8Q8TDE3 154 aaKnown RBP5.47□□□□□ -1.53
IFT88-201ENST00000319980 PTH2Q96A98 100 aa5.47□□□□□ -1.53
IFT88-201ENST00000319980 EDA2RQ9HAV5 297 aa5.47□□□□□ -1.53
IFT88-201ENST00000319980 C19orf73Q9NVV2 129 aa5.47□□□□□ -1.53
IFT88-201ENST00000319980 NSD1Q96L73 2696 aaPredicted RBP5.47□□□□□ -1.53
IFT88-201ENST00000319980 GIG44P09565 113 aaPredicted RBP5.46□□□□□ -1.53
IFT88-201ENST00000319980 GCSHP23434 173 aa5.46□□□□□ -1.53
IFT88-201ENST00000319980 VAMP3Q15836 100 aa5.46□□□□□ -1.53
IFT88-201ENST00000319980 X6R8D5 127 aa5.46□□□□□ -1.53
IFT88-201ENST00000319980 IGHV3-38A0A0C4DH36 116 aa5.46□□□□□ -1.54
IFT88-201ENST00000319980 E9PLD3 99 aa5.46□□□□□ -1.54
IFT88-201ENST00000319980 K7EP13 123 aa5.46□□□□□ -1.54
IFT88-201ENST00000319980 IGHV3-53P01767 116 aa5.46□□□□□ -1.54
IFT88-201ENST00000319980 TMEM170BQ5T4T1 132 aa5.46□□□□□ -1.54
IFT88-201ENST00000319980 OR4C5Q8NGB2 326 aa5.46□□□□□ -1.54
IFT88-201ENST00000319980 PRADC1Q9BSG0 188 aa5.46□□□□□ -1.54
IFT88-201ENST00000319980 HIGD1BQ9P298 99 aa5.46□□□□□ -1.54
IFT88-201ENST00000319980 A6NDN8 102 aa5.46□□□□□ -1.54
IFT88-201ENST00000319980 RS1O15537 224 aa5.46□□□□□ -1.54
IFT88-201ENST00000319980 PTTG1IPP53801 180 aa5.46□□□□□ -1.54
IFT88-201ENST00000319980 Q6ZTI0 123 aa5.46□□□□□ -1.54
IFT88-201ENST00000319980 ZNRF2Q8NHG8 242 aa5.46□□□□□ -1.54
IFT88-201ENST00000319980 TMEM263Q8WUH6 116 aaKnown RBP5.46□□□□□ -1.54
IFT88-201ENST00000319980 PHLDA1Q8WV24 401 aaPredicted RBP5.46□□□□□ -1.54
IFT88-201ENST00000319980 ZNF479Q96JC4 524 aa5.46□□□□□ -1.54
IFT88-201ENST00000319980 FAM110AQ9BQ89 295 aa5.46□□□□□ -1.54
IFT88-201ENST00000319980 PAPPA-AS1Q5QFB9 102 aa5.45□□□□□ -1.54
IFT88-201ENST00000319980 CEMP1Q6PRD7 247 aaPredicted RBP5.45□□□□□ -1.54
IFT88-201ENST00000319980 NOP10Q9NPE3 64 aaKnown RBP5.45□□□□□ -1.54
IFT88-201ENST00000319980 F8P00451 2351 aa5.45□□□□□ -1.54
IFT88-201ENST00000319980 MYMXA0A1B0GTQ4 84 aa5.45□□□□□ -1.54
IFT88-201ENST00000319980 CCL25O15444 150 aa5.45□□□□□ -1.54
IFT88-201ENST00000319980 FXYD2P54710 66 aa5.45□□□□□ -1.54
IFT88-201ENST00000319980 LINC00482Q8N8I6 264 aa5.45□□□□□ -1.54
IFT88-201ENST00000319980 RAB37Q96AX2 223 aa5.45□□□□□ -1.54
IFT88-201ENST00000319980 VCX2Q9H322 139 aa5.45□□□□□ -1.54
IFT88-201ENST00000319980 IGLV4-3A0A075B6K6 122 aa5.44□□□□□ -1.54
IFT88-201ENST00000319980 UBE2V1Q13404 147 aa5.44□□□□□ -1.54
IFT88-201ENST00000319980 IL17DQ8TAD2 202 aa5.44□□□□□ -1.54
IFT88-201ENST00000319980 VWFP04275 2813 aa5.44□□□□□ -1.54
IFT88-201ENST00000319980 AMMECR1LQ6DCA0 310 aa5.44□□□□□ -1.54
IFT88-201ENST00000319980 C1QTNF4Q9BXJ3 329 aa5.44□□□□□ -1.54
IFT88-201ENST00000319980 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.44□□□□□ -1.54
IFT88-201ENST00000319980 IGKV2-29A2NJV5 120 aaPredicted RBP5.44□□□□□ -1.54
IFT88-201ENST00000319980 ZNF815PA8K554 130 aa5.44□□□□□ -1.54
IFT88-201ENST00000319980 HERVK_113P61574 105 aa5.44□□□□□ -1.54
IFT88-201ENST00000319980 RNASE13Q5GAN3 156 aaKnown RBP5.44□□□□□ -1.54
IFT88-201ENST00000319980 HIST1H4GQ99525 98 aa5.44□□□□□ -1.54
IFT88-201ENST00000319980 NAA38Q9BRA0 125 aaKnown RBP5.44□□□□□ -1.54
IFT88-201ENST00000319980 NACAE9PAV3 2078 aa5.43□□□□□ -1.54
IFT88-201ENST00000319980 COTL1Q14019 142 aa5.43□□□□□ -1.54
IFT88-201ENST00000319980 RRN3P1Q2M238 152 aa5.43□□□□□ -1.54
IFT88-201ENST00000319980 SCGB1D4Q6XE38 83 aa5.43□□□□□ -1.54
IFT88-201ENST00000319980 CEND1Q8N111 149 aa5.43□□□□□ -1.54
IFT88-201ENST00000319980 CSNK1G2-AS1Q8NCQ2 148 aa5.43□□□□□ -1.54
IFT88-201ENST00000319980 SPATA3Q8NHX4 192 aa5.43□□□□□ -1.54
IFT88-201ENST00000319980 DNAJC30Q96LL9 226 aa5.43□□□□□ -1.54
IFT88-201ENST00000319980 CHCHD7Q9BUK0 85 aa5.43□□□□□ -1.54
IFT88-201ENST00000319980 A0A0J9YXV3 536 aa5.43□□□□□ -1.54
IFT88-201ENST00000319980 H3BRM9 83 aa5.43□□□□□ -1.54
IFT88-201ENST00000319980 CIDEAO60543 219 aa5.43□□□□□ -1.54
IFT88-201ENST00000319980 PYGO1Q9Y3Y4 419 aa5.43□□□□□ -1.54
IFT88-201ENST00000319980 ATRQ13535 2644 aa5.42□□□□□ -1.54
IFT88-201ENST00000319980 TRBV7-3A0A075B6L6 115 aa5.42□□□□□ -1.54
IFT88-201ENST00000319980 TRGV2A0A075B6R0 118 aa5.42□□□□□ -1.54
IFT88-201ENST00000319980 GAGE12BA1L429 117 aa5.42□□□□□ -1.54
IFT88-201ENST00000319980 PLAC8L1A1L4L8 177 aa5.42□□□□□ -1.54
IFT88-201ENST00000319980 H3BUT2 72 aa5.42□□□□□ -1.54
IFT88-201ENST00000319980 CRLF1O75462 422 aa5.42□□□□□ -1.54
IFT88-201ENST00000319980 GAGE7O76087 117 aa5.42□□□□□ -1.54
IFT88-201ENST00000319980 GAGE12FP0CL80 117 aa5.42□□□□□ -1.54
IFT88-201ENST00000319980 GAGE12GP0CL81 117 aa5.42□□□□□ -1.54
IFT88-201ENST00000319980 GAGE12IP0CL82 117 aa5.42□□□□□ -1.54
IFT88-201ENST00000319980 DAZ2Q13117 558 aaKnown RBP5.42□□□□□ -1.54
IFT88-201ENST00000319980 C16orf74Q96GX8 76 aa5.42□□□□□ -1.54
IFT88-201ENST00000319980 TM2D2Q9BX73 214 aa5.42□□□□□ -1.54
IFT88-201ENST00000319980 NHP2Q9NX24 153 aaKnown RBP5.42□□□□□ -1.54
IFT88-201ENST00000319980 TENM1Q9UKZ4 2725 aa5.42□□□□□ -1.54
IFT88-201ENST00000319980 IGHV3-64A0A075B6Q5 118 aa5.42□□□□□ -1.54
IFT88-201ENST00000319980 K7ERJ3 54 aa5.42□□□□□ -1.54
IFT88-201ENST00000319980 NFE4Q86UQ8 179 aa5.42□□□□□ -1.54
IFT88-201ENST00000319980 SLC25A29Q8N8R3 303 aa5.42□□□□□ -1.54
IFT88-201ENST00000319980 FAM104AQ969W3 186 aa5.42□□□□□ -1.54
IFT88-201ENST00000319980 TRAV4A0A0B4J268 109 aa5.42□□□□□ -1.54
IFT88-201ENST00000319980 C9orf118A6NHY6 69 aa5.42□□□□□ -1.54
IFT88-201ENST00000319980 SMIM13P0DJ93 91 aa5.42□□□□□ -1.54
IFT88-201ENST00000319980 PLEKHB2Q96CS7 222 aa5.42□□□□□ -1.54
IFT88-201ENST00000319980 UBE2D4Q9Y2X8 147 aa5.42□□□□□ -1.54
IFT88-201ENST00000319980 TSPEAR-AS2P59090 65 aa5.41□□□□□ -1.54
IFT88-201ENST00000319980 RPL36AP83881 106 aaKnown RBP5.41□□□□□ -1.54
IFT88-201ENST00000319980 RPL36ALQ969Q0 106 aaKnown RBP5.41□□□□□ -1.54
IFT88-201ENST00000319980 F8WDY8 70 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms