RNA–Protein interactions for RNA: ENST00000317555.6

PGAM5-201, Transcript of PGAM family member 5, mitochondrial serine/threonine protein phosphatase, humanhuman

TSL 1 (best) BASIC

Gene PGAM5, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM5-201ENST00000317555 LINC01620Q4KN68 170 aa17.51■□□□□ 0.39
PGAM5-201ENST00000317555 BORCS7Q96B45 105 aa17.51■□□□□ 0.39
PGAM5-201ENST00000317555 SRRM2Q9UQ35 2752 aaKnown RBP17.51■□□□□ 0.39
PGAM5-201ENST00000317555 AMTP48728 403 aa17.5■□□□□ 0.39
PGAM5-201ENST00000317555 FOXA3P55318 350 aaPredicted RBP17.5■□□□□ 0.39
PGAM5-201ENST00000317555 A0A1B0GUV1 79 aa17.49■□□□□ 0.39
PGAM5-201ENST00000317555 UBE2L6O14933 153 aa17.49■□□□□ 0.39
PGAM5-201ENST00000317555 REG3AQ06141 175 aa17.49■□□□□ 0.39
PGAM5-201ENST00000317555 TEX261Q6UWH6 196 aa17.49■□□□□ 0.39
PGAM5-201ENST00000317555 C20orf203Q8NBC4 194 aa17.49■□□□□ 0.39
PGAM5-201ENST00000317555 USP17L23D6RBM5 183 aa17.48■□□□□ 0.39
PGAM5-201ENST00000317555 INAFM2P0DMQ5 153 aa17.48■□□□□ 0.39
PGAM5-201ENST00000317555 TSKUQ8WUA8 353 aa17.48■□□□□ 0.39
PGAM5-201ENST00000317555 VPS13BQ7Z7G8 4022 aa17.47■□□□□ 0.39
PGAM5-201ENST00000317555 RPL39LQ96EH5 51 aaKnown RBP17.47■□□□□ 0.39
PGAM5-201ENST00000317555 OSTCQ9NRP0 149 aa17.47■□□□□ 0.39
PGAM5-201ENST00000317555 GFRA4Q9GZZ7 299 aa17.46■□□□□ 0.39
PGAM5-201ENST00000317555 IGLV4-60A0A075B6I1 120 aa17.45■□□□□ 0.38
PGAM5-201ENST00000317555 HIGD1CA8MV81 97 aa17.45■□□□□ 0.38
PGAM5-201ENST00000317555 KRTAP26-1Q6PEX3 210 aa17.45■□□□□ 0.38
PGAM5-201ENST00000317555 A0A1B0GUT8 65 aa17.44■□□□□ 0.38
PGAM5-201ENST00000317555 FAM231BA6NCW3 169 aa17.44■□□□□ 0.38
PGAM5-201ENST00000317555 IGLV10-54A0A075B6I4 117 aa17.43■□□□□ 0.38
PGAM5-201ENST00000317555 TRAV8-4A0A0B4J246 113 aa17.43■□□□□ 0.38
PGAM5-201ENST00000317555 FAM74A3Q4VXF1 159 aa17.43■□□□□ 0.38
PGAM5-201ENST00000317555 NCR2O95944 276 aa17.42■□□□□ 0.38
PGAM5-201ENST00000317555 TMEM241Q24JQ0 296 aa17.42■□□□□ 0.38
PGAM5-201ENST00000317555 SDHAF1A6NFY7 115 aa17.41■□□□□ 0.38
PGAM5-201ENST00000317555 PRSS1P07477 247 aa17.41■□□□□ 0.38
PGAM5-201ENST00000317555 ISOC2Q96AB3 205 aa17.4■□□□□ 0.38
PGAM5-201ENST00000317555 TMEM191AQ9H0A3 160 aa17.4■□□□□ 0.38
PGAM5-201ENST00000317555 V9GYV3 84 aa17.4■□□□□ 0.38
PGAM5-201ENST00000317555 APCSP02743 223 aa17.39■□□□□ 0.37
PGAM5-201ENST00000317555 SCXQ7RTU7 201 aa17.39■□□□□ 0.37
PGAM5-201ENST00000317555 TRBV6-5A0A0K0K1A5 114 aa17.38■□□□□ 0.37
PGAM5-201ENST00000317555 DGAT2L7PQ6IED9 249 aa17.38■□□□□ 0.37
PGAM5-201ENST00000317555 FLG2Q5D862 2391 aaPredicted RBP17.37■□□□□ 0.37
PGAM5-201ENST00000317555 RPL23P62829 140 aaKnown RBP17.37■□□□□ 0.37
PGAM5-201ENST00000317555 PEA15Q15121 130 aa17.37■□□□□ 0.37
PGAM5-201ENST00000317555 AMMECR1LQ6DCA0 310 aa17.37■□□□□ 0.37
PGAM5-201ENST00000317555 CHAC1Q9BUX1 264 aa17.37■□□□□ 0.37
PGAM5-201ENST00000317555 C9JQL5 133 aa17.36■□□□□ 0.37
PGAM5-201ENST00000317555 I3L3M4 83 aa17.36■□□□□ 0.37
PGAM5-201ENST00000317555 PMCHP20382 165 aa17.36■□□□□ 0.37
PGAM5-201ENST00000317555 ADIRFQ15847 76 aa17.36■□□□□ 0.37
PGAM5-201ENST00000317555 LINC00528Q8N1L1 170 aa17.36■□□□□ 0.37
PGAM5-201ENST00000317555 CLRN3Q8NCR9 226 aa17.36■□□□□ 0.37
PGAM5-201ENST00000317555 NAT8Q9UHE5 227 aa17.36■□□□□ 0.37
PGAM5-201ENST00000317555 H7C423 109 aa17.35■□□□□ 0.37
PGAM5-201ENST00000317555 RIGQ13278 110 aa17.35■□□□□ 0.37
PGAM5-201ENST00000317555 NUP35Q8NFH5 326 aa17.35■□□□□ 0.37
PGAM5-201ENST00000317555 ST20Q9HBF5 79 aa17.35■□□□□ 0.37
PGAM5-201ENST00000317555 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.34■□□□□ 0.37
PGAM5-201ENST00000317555 IGKV2-29A2NJV5 120 aaPredicted RBP17.34■□□□□ 0.37
PGAM5-201ENST00000317555 GAS8-AS1O95177 125 aa17.34■□□□□ 0.37
PGAM5-201ENST00000317555 SRSF3P84103 164 aaKnown RBP17.34■□□□□ 0.37
PGAM5-201ENST00000317555 MRAP2Q96G30 205 aa17.34■□□□□ 0.37
PGAM5-201ENST00000317555 RNF185Q96GF1 192 aa17.34■□□□□ 0.37
PGAM5-201ENST00000317555 SMDT1Q9H4I9 107 aa17.34■□□□□ 0.37
PGAM5-201ENST00000317555 DMBT1Q9UGM3 2413 aaPredicted RBP17.34■□□□□ 0.37
PGAM5-201ENST00000317555 PLA2G1BP04054 148 aaKnown RBP17.33■□□□□ 0.36
PGAM5-201ENST00000317555 RAB4AP20338 218 aa17.33■□□□□ 0.36
PGAM5-201ENST00000317555 RNASEKQ6P5S7 137 aaKnown RBP17.33■□□□□ 0.36
PGAM5-201ENST00000317555 AMN1Q8IY45 258 aa17.33■□□□□ 0.36
PGAM5-201ENST00000317555 NAT8BQ9UHF3 227 aa17.33■□□□□ 0.36
PGAM5-201ENST00000317555 IGKV3OR2-268A0A0C4DH90 116 aa17.32■□□□□ 0.36
PGAM5-201ENST00000317555 C9orf163Q8N9P6 203 aa17.32■□□□□ 0.36
PGAM5-201ENST00000317555 FGF6P10767 208 aa17.31■□□□□ 0.36
PGAM5-201ENST00000317555 CIRBP-AS1Q8TBR5 109 aa17.31■□□□□ 0.36
PGAM5-201ENST00000317555 hDV102S1A0JD36 115 aa17.3■□□□□ 0.36
PGAM5-201ENST00000317555 MYCBP2O75592 4640 aa17.3■□□□□ 0.36
PGAM5-201ENST00000317555 TSHBP01222 138 aa17.29■□□□□ 0.36
PGAM5-201ENST00000317555 ZNF25P17030 456 aaPredicted RBP17.29■□□□□ 0.36
PGAM5-201ENST00000317555 RPS10P46783 165 aaKnown RBP17.29■□□□□ 0.36
PGAM5-201ENST00000317555 TMEM242Q9NWH2 141 aa17.29■□□□□ 0.36
PGAM5-201ENST00000317555 POLR2KP53803 58 aaKnown RBP17.28■□□□□ 0.36
PGAM5-201ENST00000317555 BTF3L4Q96K17 158 aa17.28■□□□□ 0.36
PGAM5-201ENST00000317555 GAGE12HA6NDE8 117 aa17.27■□□□□ 0.36
PGAM5-201ENST00000317555 AP5S1Q9NUS5 200 aa17.27■□□□□ 0.36
PGAM5-201ENST00000317555 TRBV27A0A0K0K1C4 114 aa17.26■□□□□ 0.35
PGAM5-201ENST00000317555 SMIM27A0A1W2PRY6 76 aa17.26■□□□□ 0.35
PGAM5-201ENST00000317555 ESDP10768 282 aa17.26■□□□□ 0.35
PGAM5-201ENST00000317555 CNBPP62633 177 aaKnown RBP17.26■□□□□ 0.35
PGAM5-201ENST00000317555 TMEM101Q96IK0 257 aa17.26■□□□□ 0.35
PGAM5-201ENST00000317555 SMKR1H3BMG3 65 aa17.25■□□□□ 0.35
PGAM5-201ENST00000317555 PPP1R17O96001 155 aa17.25■□□□□ 0.35
PGAM5-201ENST00000317555 CHCHD10Q8WYQ3 142 aaPredicted RBP17.24■□□□□ 0.35
PGAM5-201ENST00000317555 CFAP161Q6P656 301 aa17.23■□□□□ 0.35
PGAM5-201ENST00000317555 OR5A1Q8NGJ0 315 aa17.23■□□□□ 0.35
PGAM5-201ENST00000317555 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.22■□□□□ 0.35
PGAM5-201ENST00000317555 VCYO14598 125 aa17.22■□□□□ 0.35
PGAM5-201ENST00000317555 SDIM1Q6ZPB5 146 aa17.22■□□□□ 0.35
PGAM5-201ENST00000317555 HERC1Q15751 4861 aa17.22■□□□□ 0.35
PGAM5-201ENST00000317555 A0A1B0GW15 77 aa17.21■□□□□ 0.35
PGAM5-201ENST00000317555 C7orf77A4D0Y5 90 aa17.21■□□□□ 0.35
PGAM5-201ENST00000317555 CAMPP49913 170 aa17.21■□□□□ 0.35
PGAM5-201ENST00000317555 FAM104BQ5XKR9 115 aa17.21■□□□□ 0.35
PGAM5-201ENST00000317555 C15orf56Q8N910 161 aa17.21■□□□□ 0.35
PGAM5-201ENST00000317555 NRACQ8N912 160 aa17.21■□□□□ 0.35
PGAM5-201ENST00000317555 FCER1GP30273 86 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms