RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 ATP6V0CP27449 155 aa7.09□□□□□ -1.27
SMIM4-201ENST00000307106 C9orf116Q5BN46 136 aaPredicted RBP7.09□□□□□ -1.27
SMIM4-201ENST00000307106 PHF5AQ7RTV0 110 aaKnown RBP7.09□□□□□ -1.27
SMIM4-201ENST00000307106 NKX6-2Q9C056 277 aaPredicted RBP7.09□□□□□ -1.27
SMIM4-201ENST00000307106 MUC17Q685J3 4493 aa7.09□□□□□ -1.28
SMIM4-201ENST00000307106 RPL13AP40429 203 aaKnown RBP7.08□□□□□ -1.28
SMIM4-201ENST00000307106 COTL1Q14019 142 aa7.08□□□□□ -1.28
SMIM4-201ENST00000307106 ZNF561-AS1K7EIQ3 104 aa7.07□□□□□ -1.28
SMIM4-201ENST00000307106 XCL1P47992 114 aa7.07□□□□□ -1.28
SMIM4-201ENST00000307106 EIF5AP63241 154 aaKnown RBP7.07□□□□□ -1.28
SMIM4-201ENST00000307106 SERF2P84101 59 aa7.07□□□□□ -1.28
SMIM4-201ENST00000307106 AMMECR1LQ6DCA0 310 aa7.07□□□□□ -1.28
SMIM4-201ENST00000307106 RASL11AQ6T310 242 aa7.07□□□□□ -1.28
SMIM4-201ENST00000307106 MED28Q9H204 178 aa7.07□□□□□ -1.28
SMIM4-201ENST00000307106 TNFSF18Q9UNG2 199 aa7.07□□□□□ -1.28
SMIM4-201ENST00000307106 TSPAN13O95857 204 aa7.06□□□□□ -1.28
SMIM4-201ENST00000307106 BCL2P10415 239 aa7.06□□□□□ -1.28
SMIM4-201ENST00000307106 FGF6P10767 208 aa7.05□□□□□ -1.28
SMIM4-201ENST00000307106 CAMPP49913 170 aa7.05□□□□□ -1.28
SMIM4-201ENST00000307106 ZNF726P1Q15940 193 aa7.05□□□□□ -1.28
SMIM4-201ENST00000307106 MZT2BQ6NZ67 158 aa7.05□□□□□ -1.28
SMIM4-201ENST00000307106 RNASEKQ6P5S7 137 aaKnown RBP7.05□□□□□ -1.28
SMIM4-201ENST00000307106 NIT2Q9NQR4 276 aa7.05□□□□□ -1.28
SMIM4-201ENST00000307106 A0A087WZ39 114 aa7.04□□□□□ -1.28
SMIM4-201ENST00000307106 CTXND1A0A1B0GTU2 59 aa7.04□□□□□ -1.28
SMIM4-201ENST00000307106 CCL25O15444 150 aa7.04□□□□□ -1.28
SMIM4-201ENST00000307106 AKR1C3P42330 323 aa7.04□□□□□ -1.28
SMIM4-201ENST00000307106 OR5A1Q8NGJ0 315 aa7.04□□□□□ -1.28
SMIM4-201ENST00000307106 ISOC2Q96AB3 205 aa7.04□□□□□ -1.28
SMIM4-201ENST00000307106 APOMO95445 188 aa7.03□□□□□ -1.28
SMIM4-201ENST00000307106 RPL18AQ02543 176 aaKnown RBP7.03□□□□□ -1.28
SMIM4-201ENST00000307106 NUP35Q8NFH5 326 aa7.03□□□□□ -1.28
SMIM4-201ENST00000307106 CCDC32Q9BV29 185 aa7.03□□□□□ -1.28
SMIM4-201ENST00000307106 IGLV4-69A0A075B6H9 119 aa7.02□□□□□ -1.29
SMIM4-201ENST00000307106 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.02□□□□□ -1.29
SMIM4-201ENST00000307106 LINC00959A0A1B0GUT2 108 aa7.02□□□□□ -1.29
SMIM4-201ENST00000307106 IGKV2-29A2NJV5 120 aaPredicted RBP7.02□□□□□ -1.29
SMIM4-201ENST00000307106 KRTAP11-1Q8IUC1 163 aa7.02□□□□□ -1.29
SMIM4-201ENST00000307106 STOML3Q8TAV4 291 aa7.02□□□□□ -1.29
SMIM4-201ENST00000307106 ENKURQ8TC29 256 aa7.02□□□□□ -1.29
SMIM4-201ENST00000307106 TCEAL7Q9BRU2 100 aa7.02□□□□□ -1.29
SMIM4-201ENST00000307106 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.01□□□□□ -1.29
SMIM4-201ENST00000307106 H7C423 109 aa7.01□□□□□ -1.29
SMIM4-201ENST00000307106 NTF3P20783 257 aa7.01□□□□□ -1.29
SMIM4-201ENST00000307106 MEF2BQ02080 365 aaPredicted RBP7.01□□□□□ -1.29
SMIM4-201ENST00000307106 CST9LP1Q5W188 147 aa7.01□□□□□ -1.29
SMIM4-201ENST00000307106 Q6ZNX1 250 aa7.01□□□□□ -1.29
SMIM4-201ENST00000307106 TSKUQ8WUA8 353 aa7.01□□□□□ -1.29
SMIM4-201ENST00000307106 MLST8Q9BVC4 326 aa7.01□□□□□ -1.29
SMIM4-201ENST00000307106 TPPP3Q9BW30 176 aa7.01□□□□□ -1.29
SMIM4-201ENST00000307106 CARHSP1Q9Y2V2 147 aaKnown RBP7.01□□□□□ -1.29
SMIM4-201ENST00000307106 SSNA1O43805 119 aa7□□□□□ -1.29
SMIM4-201ENST00000307106 FHITP49789 147 aa7□□□□□ -1.29
SMIM4-201ENST00000307106 CAMK2N2Q96S95 79 aa7□□□□□ -1.29
SMIM4-201ENST00000307106 CDIP1Q9H305 208 aa7□□□□□ -1.29
SMIM4-201ENST00000307106 APCSP02743 223 aa6.99□□□□□ -1.29
SMIM4-201ENST00000307106 IGLC6P0CF74 106 aa6.99□□□□□ -1.29
SMIM4-201ENST00000307106 ZNF25P17030 456 aaPredicted RBP6.99□□□□□ -1.29
SMIM4-201ENST00000307106 SS18Q15532 418 aa6.99□□□□□ -1.29
SMIM4-201ENST00000307106 CD164L2Q6UWJ8 174 aa6.99□□□□□ -1.29
SMIM4-201ENST00000307106 BAGE2Q86Y30 109 aa6.99□□□□□ -1.29
SMIM4-201ENST00000307106 BTF3L4Q96K17 158 aa6.99□□□□□ -1.29
SMIM4-201ENST00000307106 INMT-MINDY4F8WBC2 141 aa6.98□□□□□ -1.29
SMIM4-201ENST00000307106 NCR2O95944 276 aa6.98□□□□□ -1.29
SMIM4-201ENST00000307106 S100A9P06702 114 aaKnown RBP6.98□□□□□ -1.29
SMIM4-201ENST00000307106 TRGC1P0CF51 173 aa6.98□□□□□ -1.29
SMIM4-201ENST00000307106 OPRPNQ99935 248 aaPredicted RBP6.98□□□□□ -1.29
SMIM4-201ENST00000307106 FAM168BA1KXE4 195 aa6.97□□□□□ -1.29
SMIM4-201ENST00000307106 MAP1LC3B2A6NCE7 125 aa6.97□□□□□ -1.29
SMIM4-201ENST00000307106 BCL2L11O43521 198 aa6.97□□□□□ -1.29
SMIM4-201ENST00000307106 MALP21145 153 aa6.97□□□□□ -1.29
SMIM4-201ENST00000307106 LINC01547P58512 204 aaPredicted RBP6.97□□□□□ -1.29
SMIM4-201ENST00000307106 EIF5AL1Q6IS14 154 aaKnown RBP6.97□□□□□ -1.29
SMIM4-201ENST00000307106 TMEM101Q96IK0 257 aa6.97□□□□□ -1.29
SMIM4-201ENST00000307106 MAP1LC3BQ9GZQ8 125 aa6.97□□□□□ -1.29
SMIM4-201ENST00000307106 SCO2A0A1W2PP80 73 aa6.96□□□□□ -1.3
SMIM4-201ENST00000307106 OR2D3Q8NGH3 330 aa6.96□□□□□ -1.3
SMIM4-201ENST00000307106 C2orf48Q96LS8 159 aa6.96□□□□□ -1.3
SMIM4-201ENST00000307106 RPP21Q9H633 154 aaKnown RBP6.96□□□□□ -1.3
SMIM4-201ENST00000307106 PAGE4O60829 102 aa6.95□□□□□ -1.3
SMIM4-201ENST00000307106 TPRXLQ17RH7 258 aa6.95□□□□□ -1.3
SMIM4-201ENST00000307106 AKR1C8PQ5T2L2 129 aa6.95□□□□□ -1.3
SMIM4-201ENST00000307106 RPL7L1Q6DKI1 246 aaKnown RBP6.95□□□□□ -1.3
SMIM4-201ENST00000307106 FAM19A5Q7Z5A7 132 aaPredicted RBP6.95□□□□□ -1.3
SMIM4-201ENST00000307106 GATD1Q8NB37 220 aa6.95□□□□□ -1.3
SMIM4-201ENST00000307106 RETNLBQ9BQ08 111 aa6.95□□□□□ -1.3
SMIM4-201ENST00000307106 C19orf71A6NCJ1 209 aa6.94□□□□□ -1.3
SMIM4-201ENST00000307106 COX7A2LO14548 114 aa6.94□□□□□ -1.3
SMIM4-201ENST00000307106 ESDP10768 282 aa6.94□□□□□ -1.3
SMIM4-201ENST00000307106 DEFA1P59665 94 aa6.94□□□□□ -1.3
SMIM4-201ENST00000307106 RPS20P60866 119 aaKnown RBP6.94□□□□□ -1.3
SMIM4-201ENST00000307106 UBE2BP63146 152 aa6.94□□□□□ -1.3
SMIM4-201ENST00000307106 RPL39LQ96EH5 51 aaKnown RBP6.94□□□□□ -1.3
SMIM4-201ENST00000307106 F2Z2F3 143 aa6.93□□□□□ -1.3
SMIM4-201ENST00000307106 SRSF3P84103 164 aaKnown RBP6.93□□□□□ -1.3
SMIM4-201ENST00000307106 RNF151Q2KHN1 245 aa6.93□□□□□ -1.3
SMIM4-201ENST00000307106 MARVELD1Q9BSK0 173 aa6.93□□□□□ -1.3
SMIM4-201ENST00000307106 CDC42SE2Q9NRR3 84 aa6.93□□□□□ -1.3
SMIM4-201ENST00000307106 A0A087X002 238 aa6.92□□□□□ -1.3
SMIM4-201ENST00000307106 BORCS7-ASMTA0A0B4J1R7 106 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms