RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 NRACQ8N912 160 aa10.59□□□□□ -0.71
SDC2-201ENST00000302190 TRAV8-3A0A0A6YYJ7 113 aa10.58□□□□□ -0.72
SDC2-201ENST00000302190 TRPT1Q86TN4 253 aaKnown RBP10.58□□□□□ -0.72
SDC2-201ENST00000302190 A4D1N5 150 aa10.58□□□□□ -0.72
SDC2-201ENST00000302190 TAL2Q16559 108 aa10.58□□□□□ -0.72
SDC2-201ENST00000302190 PRO1854Q9UHT4 67 aa10.58□□□□□ -0.72
SDC2-201ENST00000302190 SETXQ7Z333 2677 aaKnown RBP10.58□□□□□ -0.72
SDC2-201ENST00000302190 TM2D2Q9BX73 214 aa10.57□□□□□ -0.72
SDC2-201ENST00000302190 EBI3Q14213 229 aa10.57□□□□□ -0.72
SDC2-201ENST00000302190 M0R2P5 195 aa10.57□□□□□ -0.72
SDC2-201ENST00000302190 TOMM6Q96B49 74 aa10.56□□□□□ -0.72
SDC2-201ENST00000302190 CCDC179H3BU77 68 aa10.56□□□□□ -0.72
SDC2-201ENST00000302190 I3L3M4 83 aa10.56□□□□□ -0.72
SDC2-201ENST00000302190 ZNRF2Q8NHG8 242 aa10.56□□□□□ -0.72
SDC2-201ENST00000302190 MRPL53Q96EL3 112 aaKnown RBP10.56□□□□□ -0.72
SDC2-201ENST00000302190 IGHV4OR15-8A0A075B7B6 117 aa10.56□□□□□ -0.72
SDC2-201ENST00000302190 A0A087WW49 117 aa10.56□□□□□ -0.72
SDC2-201ENST00000302190 PROK1P58294 105 aa10.56□□□□□ -0.72
SDC2-201ENST00000302190 NDUFA12Q9UI09 145 aa10.56□□□□□ -0.72
SDC2-201ENST00000302190 LENEPQ9Y5L5 61 aa10.56□□□□□ -0.72
SDC2-201ENST00000302190 IGHG2P01859 326 aa10.55□□□□□ -0.72
SDC2-201ENST00000302190 C2orf82Q6UX34 121 aa10.55□□□□□ -0.72
SDC2-201ENST00000302190 C3orf56Q8N813 242 aa10.55□□□□□ -0.72
SDC2-201ENST00000302190 C10orf105Q8TEF2 133 aa10.55□□□□□ -0.72
SDC2-201ENST00000302190 TEN1Q86WV5 123 aa10.54□□□□□ -0.72
SDC2-201ENST00000302190 LINC01356Q8N9X3 169 aa10.54□□□□□ -0.72
SDC2-201ENST00000302190 IFITM1P13164 125 aa10.54□□□□□ -0.72
SDC2-201ENST00000302190 NTN5Q8WTR8 489 aaPredicted RBP10.54□□□□□ -0.72
SDC2-201ENST00000302190 PEMTQ9UBM1 199 aa10.54□□□□□ -0.72
SDC2-201ENST00000302190 RNASE3P12724 160 aaKnown RBP10.53□□□□□ -0.72
SDC2-201ENST00000302190 NSUN5P1Q3KNT7 163 aa10.53□□□□□ -0.72
SDC2-201ENST00000302190 NFE4Q86UQ8 179 aa10.53□□□□□ -0.72
SDC2-201ENST00000302190 MUSTN1Q8IVN3 82 aa10.53□□□□□ -0.72
SDC2-201ENST00000302190 A8MZ25 164 aa10.53□□□□□ -0.72
SDC2-201ENST00000302190 PRIMA1Q86XR5 153 aa10.53□□□□□ -0.72
SDC2-201ENST00000302190 TMEM141Q96I45 108 aa10.53□□□□□ -0.72
SDC2-201ENST00000302190 SLC25A20O43772 301 aa10.52□□□□□ -0.72
SDC2-201ENST00000302190 AVPP01185 164 aa10.52□□□□□ -0.72
SDC2-201ENST00000302190 ZNF415Q09FC8 603 aa10.52□□□□□ -0.72
SDC2-201ENST00000302190 CHCHD5Q9BSY4 110 aa10.52□□□□□ -0.72
SDC2-201ENST00000302190 NDUFV3P56181 108 aaKnown RBP10.52□□□□□ -0.73
SDC2-201ENST00000302190 NEXN-AS1Q8NBZ9 246 aa10.52□□□□□ -0.73
SDC2-201ENST00000302190 TRAV8-4A0A0B4J246 113 aa10.51□□□□□ -0.73
SDC2-201ENST00000302190 TRGV4A0A0C4DH28 118 aa10.51□□□□□ -0.73
SDC2-201ENST00000302190 HTN3P15516 51 aa10.51□□□□□ -0.73
SDC2-201ENST00000302190 ATP6V0E2Q8NHE4 81 aa10.51□□□□□ -0.73
SDC2-201ENST00000302190 DEFB130BP0DP73 79 aa10.51□□□□□ -0.73
SDC2-201ENST00000302190 DEFB130AP0DP74 79 aa10.51□□□□□ -0.73
SDC2-201ENST00000302190 PRO0461Q9UI25 63 aa10.51□□□□□ -0.73
SDC2-201ENST00000302190 TEP1Q99973 2627 aaKnown RBP10.5□□□□□ -0.73
SDC2-201ENST00000302190 ANKRD29Q8N6D5 301 aa10.5□□□□□ -0.73
SDC2-201ENST00000302190 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.49□□□□□ -0.73
SDC2-201ENST00000302190 TRAV12-1A0A0B4J245 112 aa10.49□□□□□ -0.73
SDC2-201ENST00000302190 CFC1BP0CG36 223 aa10.49□□□□□ -0.73
SDC2-201ENST00000302190 CFC1P0CG37 223 aa10.49□□□□□ -0.73
SDC2-201ENST00000302190 CFAP126Q5VTH2 177 aa10.49□□□□□ -0.73
SDC2-201ENST00000302190 TMEM61Q8N0U2 210 aa10.49□□□□□ -0.73
SDC2-201ENST00000302190 LINC00158P58513 81 aa10.49□□□□□ -0.73
SDC2-201ENST00000302190 TMEM101Q96IK0 257 aa10.49□□□□□ -0.73
SDC2-201ENST00000302190 BRI3O95415 125 aa10.49□□□□□ -0.73
SDC2-201ENST00000302190 DNAL4O96015 105 aa10.49□□□□□ -0.73
SDC2-201ENST00000302190 FHL3Q13643 280 aa10.49□□□□□ -0.73
SDC2-201ENST00000302190 Q96MF0 132 aa10.49□□□□□ -0.73
SDC2-201ENST00000302190 U3KQE9 123 aa10.49□□□□□ -0.73
SDC2-201ENST00000302190 A0A096LPF7 62 aa10.48□□□□□ -0.73
SDC2-201ENST00000302190 A6NDX4 124 aa10.48□□□□□ -0.73
SDC2-201ENST00000302190 M0QXV9 152 aa10.48□□□□□ -0.73
SDC2-201ENST00000302190 CNFNQ9BYD5 112 aa10.48□□□□□ -0.73
SDC2-201ENST00000302190 A0A0J9YX75 114 aa10.48□□□□□ -0.73
SDC2-201ENST00000302190 RPL36AP83881 106 aaKnown RBP10.48□□□□□ -0.73
SDC2-201ENST00000302190 RPL36ALQ969Q0 106 aaKnown RBP10.48□□□□□ -0.73
SDC2-201ENST00000302190 TCL1BO95988 128 aa10.48□□□□□ -0.73
SDC2-201ENST00000302190 INSP01308 110 aa10.48□□□□□ -0.73
SDC2-201ENST00000302190 C10orf126Q8N4M7 172 aa10.48□□□□□ -0.73
SDC2-201ENST00000302190 RS1O15537 224 aa10.47□□□□□ -0.73
SDC2-201ENST00000302190 ATXN8Q156A1 80 aa10.47□□□□□ -0.73
SDC2-201ENST00000302190 C18orf65Q6ZTR6 163 aa10.47□□□□□ -0.73
SDC2-201ENST00000302190 PFN2P35080 140 aa10.47□□□□□ -0.73
SDC2-201ENST00000302190 SRSF2Q01130 221 aaKnown RBP10.47□□□□□ -0.73
SDC2-201ENST00000302190 NDUFA11Q86Y39 141 aa10.46□□□□□ -0.73
SDC2-201ENST00000302190 C15orf53Q8NAA6 179 aa10.46□□□□□ -0.73
SDC2-201ENST00000302190 ZNF580Q9UK33 172 aa10.46□□□□□ -0.73
SDC2-201ENST00000302190 VPREB3Q9UKI3 123 aa10.46□□□□□ -0.73
SDC2-201ENST00000302190 MUC4Q99102 2169 aa10.46□□□□□ -0.74
SDC2-201ENST00000302190 NIPBLQ6KC79 2804 aaeCLIP10.46□□□□□ -0.74
SDC2-201ENST00000302190 TRAV4A0A0B4J268 109 aa10.46□□□□□ -0.74
SDC2-201ENST00000302190 SMCPP49901 116 aaPredicted RBP10.46□□□□□ -0.74
SDC2-201ENST00000302190 PPDPFQ9H3Y8 114 aa10.46□□□□□ -0.74
SDC2-201ENST00000302190 A0A0J9YY99 117 aa10.45□□□□□ -0.74
SDC2-201ENST00000302190 LINC01619G3V211 115 aa10.45□□□□□ -0.74
SDC2-201ENST00000302190 RHODO00212 210 aa10.45□□□□□ -0.74
SDC2-201ENST00000302190 CLPSL2Q6UWE3 100 aa10.45□□□□□ -0.74
SDC2-201ENST00000302190 PF4P02776 101 aa10.45□□□□□ -0.74
SDC2-201ENST00000302190 C20orf203Q8NBC4 194 aa10.45□□□□□ -0.74
SDC2-201ENST00000302190 CARD19Q96LW7 228 aa10.45□□□□□ -0.74
SDC2-201ENST00000302190 Q9H8V8 135 aa10.45□□□□□ -0.74
SDC2-201ENST00000302190 IGLV2-18A0A075B6J9 118 aa10.44□□□□□ -0.74
SDC2-201ENST00000302190 NHLRC4P0CG21 123 aaPredicted RBP10.44□□□□□ -0.74
SDC2-201ENST00000302190 PLA2G2AP14555 144 aa10.44□□□□□ -0.74
SDC2-201ENST00000302190 CLEC2BQ92478 149 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms