RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 TRAV26-1A0A087WT03 109 aa3.11□□□□□ -1.91
SCN3A-201ENST00000283254 A6NDX4 124 aa3.11□□□□□ -1.91
SCN3A-201ENST00000283254 TDRG1Q3Y452 100 aa3.11□□□□□ -1.91
SCN3A-201ENST00000283254 COA6Q5JTJ3 125 aaKnown RBP3.11□□□□□ -1.91
SCN3A-201ENST00000283254 RPL39LQ96EH5 51 aaKnown RBP3.11□□□□□ -1.91
SCN3A-201ENST00000283254 FSHBP01225 129 aa3.11□□□□□ -1.91
SCN3A-201ENST00000283254 PRB1P04280 392 aa3.11□□□□□ -1.91
SCN3A-201ENST00000283254 IGF1P05019 195 aa3.11□□□□□ -1.91
SCN3A-201ENST00000283254 ODF3BA8MYP8 253 aa3.11□□□□□ -1.91
SCN3A-201ENST00000283254 P0DMU3 169 aa3.11□□□□□ -1.91
SCN3A-201ENST00000283254 FAM231AP0DMU4 169 aa3.11□□□□□ -1.91
SCN3A-201ENST00000283254 FAM231CP0DMU5 169 aa3.11□□□□□ -1.91
SCN3A-201ENST00000283254 ADCYAP1P18509 176 aa3.11□□□□□ -1.91
SCN3A-201ENST00000283254 ZFP36P26651 326 aaKnown RBP3.11□□□□□ -1.91
SCN3A-201ENST00000283254 NLRC5Q86WI3 1866 aa3.11□□□□□ -1.91
SCN3A-201ENST00000283254 HIST2H2BDQ6DRA6 164 aa3.11□□□□□ -1.91
SCN3A-201ENST00000283254 FRMPD3Q5JV73 1810 aa3.11□□□□□ -1.91
SCN3A-201ENST00000283254 ATP5EP56381 51 aaPredicted RBP3.11□□□□□ -1.91
SCN3A-201ENST00000283254 SYCNQ0VAF6 134 aa3.11□□□□□ -1.91
SCN3A-201ENST00000283254 FAM222AQ5U5X8 452 aa3.11□□□□□ -1.91
SCN3A-201ENST00000283254 FAM110AQ9BQ89 295 aa3.11□□□□□ -1.91
SCN3A-201ENST00000283254 GATA1P15976 413 aaPredicted RBP3.1□□□□□ -1.91
SCN3A-201ENST00000283254 FAM19A1Q7Z5A9 133 aa3.1□□□□□ -1.91
SCN3A-201ENST00000283254 MIR7-3HGQ8N6C7 128 aa3.1□□□□□ -1.91
SCN3A-201ENST00000283254 CHCHD10Q8WYQ3 142 aaPredicted RBP3.1□□□□□ -1.91
SCN3A-201ENST00000283254 LINC00574Q9H8X3 128 aa3.1□□□□□ -1.91
SCN3A-201ENST00000283254 WI2-2373I1.2A0A1W2PRP0 233 aa3.1□□□□□ -1.91
SCN3A-201ENST00000283254 NUPR2A6NF83 97 aa3.1□□□□□ -1.91
SCN3A-201ENST00000283254 NCR3O14931 201 aa3.1□□□□□ -1.91
SCN3A-201ENST00000283254 V9GYY9 64 aa3.1□□□□□ -1.91
SCN3A-201ENST00000283254 TMEM131Q92545 1883 aa3.1□□□□□ -1.91
SCN3A-201ENST00000283254 E9PLD3 99 aa3.1□□□□□ -1.91
SCN3A-201ENST00000283254 CRYGBP07316 175 aa3.1□□□□□ -1.91
SCN3A-201ENST00000283254 C10orf91Q5T1B1 145 aa3.1□□□□□ -1.91
SCN3A-201ENST00000283254 HELZ2Q9BYK8 2649 aaKnown RBP3.1□□□□□ -1.91
SCN3A-201ENST00000283254 WT1P19544 449 aaPredicted RBP3.1□□□□□ -1.91
SCN3A-201ENST00000283254 FAM236AA0A1B0GUQ0 79 aa3.1□□□□□ -1.91
SCN3A-201ENST00000283254 FAM236BA0A1B0GV22 79 aa3.1□□□□□ -1.91
SCN3A-201ENST00000283254 LRCOL1A6NCL2 159 aa3.1□□□□□ -1.91
SCN3A-201ENST00000283254 MRPL55Q7Z7F7 128 aaKnown RBP3.1□□□□□ -1.91
SCN3A-201ENST00000283254 SVIPQ8NHG7 77 aa3.1□□□□□ -1.91
SCN3A-201ENST00000283254 TRBV6-4A0A1B0GX49 114 aa3.1□□□□□ -1.91
SCN3A-201ENST00000283254 DEFB4AO15263 64 aa3.1□□□□□ -1.91
SCN3A-201ENST00000283254 NPSP0C0P6 89 aa3.1□□□□□ -1.91
SCN3A-201ENST00000283254 RSPO1Q2MKA7 263 aaPredicted RBP3.1□□□□□ -1.91
SCN3A-201ENST00000283254 MDFICQ9P1T7 246 aa3.1□□□□□ -1.91
SCN3A-201ENST00000283254 KRTAP27-1Q3LI81 207 aa3.1□□□□□ -1.91
SCN3A-201ENST00000283254 UBE2D3P61077 147 aa3.1□□□□□ -1.91
SCN3A-201ENST00000283254 MRGPRG-AS1Q2M3A8 158 aa3.1□□□□□ -1.91
SCN3A-201ENST00000283254 ESM1Q9NQ30 184 aa3.1□□□□□ -1.91
SCN3A-201ENST00000283254 SPATA12Q7Z6I5 190 aa3.09□□□□□ -1.91
SCN3A-201ENST00000283254 LYPD6BQ8NI32 183 aa3.09□□□□□ -1.91
SCN3A-201ENST00000283254 CHCHD7Q9BUK0 85 aa3.09□□□□□ -1.91
SCN3A-201ENST00000283254 UNC79Q9P2D8 2635 aa3.09□□□□□ -1.91
SCN3A-201ENST00000283254 COL4A6Q14031 1691 aa3.09□□□□□ -1.91
SCN3A-201ENST00000283254 Q6YL49 198 aa3.09□□□□□ -1.91
SCN3A-201ENST00000283254 PCP2Q8IVA1 136 aa3.09□□□□□ -1.91
SCN3A-201ENST00000283254 PLXNB3Q9ULL4 1909 aa3.09□□□□□ -1.91
SCN3A-201ENST00000283254 ARTNQ5T4W7 220 aa3.09□□□□□ -1.91
SCN3A-201ENST00000283254 LINC00643Q86TS7 51 aa3.09□□□□□ -1.91
SCN3A-201ENST00000283254 LINC00269Q8N2A0 174 aa3.09□□□□□ -1.91
SCN3A-201ENST00000283254 K7EN84 100 aa3.09□□□□□ -1.91
SCN3A-201ENST00000283254 RPL39P62891 51 aaKnown RBP3.09□□□□□ -1.91
SCN3A-201ENST00000283254 C3orf22Q8N5N4 141 aa3.09□□□□□ -1.92
SCN3A-201ENST00000283254 Q8N976 141 aa3.09□□□□□ -1.92
SCN3A-201ENST00000283254 ARHGAP32A7KAX9 2087 aa3.09□□□□□ -1.92
SCN3A-201ENST00000283254 WFDC11Q8NEX6 87 aa3.09□□□□□ -1.92
SCN3A-201ENST00000283254 CCDC140Q96MF4 163 aa3.09□□□□□ -1.92
SCN3A-201ENST00000283254 K7EQG2 157 aa3.09□□□□□ -1.92
SCN3A-201ENST00000283254 LMO4P61968 165 aa3.09□□□□□ -1.92
SCN3A-201ENST00000283254 Q6ZSR3 168 aa3.09□□□□□ -1.92
SCN3A-201ENST00000283254 Q8N7P7 452 aa3.09□□□□□ -1.92
SCN3A-201ENST00000283254 Q8N9L7 120 aa3.09□□□□□ -1.92
SCN3A-201ENST00000283254 NBEAL1Q6ZS30 2694 aa3.08□□□□□ -1.92
SCN3A-201ENST00000283254 DEFB114Q30KQ6 69 aa3.08□□□□□ -1.92
SCN3A-201ENST00000283254 Q6ZTI0 123 aa3.08□□□□□ -1.92
SCN3A-201ENST00000283254 IGKV2D-26A0A0A0MRZ7 120 aa3.08□□□□□ -1.92
SCN3A-201ENST00000283254 C19orf71A6NCJ1 209 aa3.08□□□□□ -1.92
SCN3A-201ENST00000283254 DAND5Q8N907 189 aa3.08□□□□□ -1.92
SCN3A-201ENST00000283254 LOC107984640A0A0U1RRK4 108 aa3.08□□□□□ -1.92
SCN3A-201ENST00000283254 FAM167A-AS1Q96KT0 104 aa3.08□□□□□ -1.92
SCN3A-201ENST00000283254 SPRY4Q9C004 299 aa3.08□□□□□ -1.92
SCN3A-201ENST00000283254 CD164L2Q6UWJ8 174 aa3.08□□□□□ -1.92
SCN3A-201ENST00000283254 LYPD6Q86Y78 171 aa3.08□□□□□ -1.92
SCN3A-201ENST00000283254 PRORYQ9H606 182 aa3.08□□□□□ -1.92
SCN3A-201ENST00000283254 PIK3CD-AS1Q5SR53 167 aa3.08□□□□□ -1.92
SCN3A-201ENST00000283254 PATE2Q6UY27 113 aa3.08□□□□□ -1.92
SCN3A-201ENST00000283254 FAM19A3Q7Z5A8 133 aa3.08□□□□□ -1.92
SCN3A-201ENST00000283254 DMBT1Q9UGM3 2413 aaPredicted RBP3.08□□□□□ -1.92
SCN3A-201ENST00000283254 ITPR3Q14573 2671 aa3.08□□□□□ -1.92
SCN3A-201ENST00000283254 IGKV3D-7A0A0C4DH55 119 aa3.08□□□□□ -1.92
SCN3A-201ENST00000283254 BRK1Q8WUW1 75 aa3.08□□□□□ -1.92
SCN3A-201ENST00000283254 NDUFC1O43677 76 aa3.07□□□□□ -1.92
SCN3A-201ENST00000283254 RPL28P46779 137 aaKnown RBP3.07□□□□□ -1.92
SCN3A-201ENST00000283254 NRGNQ92686 78 aa3.07□□□□□ -1.92
SCN3A-201ENST00000283254 UNQ9165/PRO28630Q6UXU0 137 aa3.07□□□□□ -1.92
SCN3A-201ENST00000283254 CCKP06307 115 aa3.07□□□□□ -1.92
SCN3A-201ENST00000283254 MSRB1Q9NZV6 116 aa3.07□□□□□ -1.92
SCN3A-201ENST00000283254 IGHV4-31P0DP07 118 aa3.07□□□□□ -1.92
SCN3A-201ENST00000283254 EBI3Q14213 229 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 198 ms