RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 TRAV8-3A0A0A6YYJ7 113 aa4.4□□□□□ -1.71
CD44-204ENST00000279452 LINC00862A6NCI5 91 aa4.4□□□□□ -1.71
CD44-204ENST00000279452 I3L3M4 83 aa4.4□□□□□ -1.71
CD44-204ENST00000279452 RPS10P46783 165 aaKnown RBP4.4□□□□□ -1.71
CD44-204ENST00000279452 LAGE3Q14657 143 aa4.4□□□□□ -1.71
CD44-204ENST00000279452 IQCJQ1A5X6 159 aa4.4□□□□□ -1.71
CD44-204ENST00000279452 MRPL51Q4U2R6 128 aaKnown RBP4.4□□□□□ -1.71
CD44-204ENST00000279452 FAM104BQ5XKR9 115 aa4.4□□□□□ -1.71
CD44-204ENST00000279452 RNASEKQ6P5S7 137 aaKnown RBP4.4□□□□□ -1.71
CD44-204ENST00000279452 ATRAIDQ6UW56 229 aa4.4□□□□□ -1.71
CD44-204ENST00000279452 ATP5L2Q7Z4Y8 100 aa4.4□□□□□ -1.71
CD44-204ENST00000279452 BTF3L4Q96K17 158 aa4.4□□□□□ -1.71
CD44-204ENST00000279452 CHCHD7Q9BUK0 85 aa4.4□□□□□ -1.71
CD44-204ENST00000279452 TM2D2Q9BX73 214 aa4.4□□□□□ -1.71
CD44-204ENST00000279452 RPS10P5Q9NQ39 176 aa4.4□□□□□ -1.71
CD44-204ENST00000279452 TMEM242Q9NWH2 141 aa4.4□□□□□ -1.71
CD44-204ENST00000279452 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.39□□□□□ -1.71
CD44-204ENST00000279452 IGKV3OR2-268A0A0C4DH90 116 aa4.39□□□□□ -1.71
CD44-204ENST00000279452 A0A1B0GXF2 115 aa4.39□□□□□ -1.71
CD44-204ENST00000279452 IGKV2-29A2NJV5 120 aaPredicted RBP4.39□□□□□ -1.71
CD44-204ENST00000279452 C16orf90A8MZG2 172 aa4.39□□□□□ -1.71
CD44-204ENST00000279452 D6R8Y8 96 aa4.39□□□□□ -1.71
CD44-204ENST00000279452 LECT2O14960 151 aa4.39□□□□□ -1.71
CD44-204ENST00000279452 PPP1R17O96001 155 aa4.39□□□□□ -1.71
CD44-204ENST00000279452 HLA-DQA1P01909 254 aa4.39□□□□□ -1.71
CD44-204ENST00000279452 APOC3P02656 99 aa4.39□□□□□ -1.71
CD44-204ENST00000279452 SUMO2P61956 95 aaKnown RBP4.39□□□□□ -1.71
CD44-204ENST00000279452 RBX1P62877 108 aa4.39□□□□□ -1.71
CD44-204ENST00000279452 Q0VG73 95 aa4.39□□□□□ -1.71
CD44-204ENST00000279452 SPATA12Q7Z6I5 190 aa4.39□□□□□ -1.71
CD44-204ENST00000279452 KIR2DL4Q99706 377 aa4.39□□□□□ -1.71
CD44-204ENST00000279452 TMEM70Q9BUB7 260 aa4.39□□□□□ -1.71
CD44-204ENST00000279452 C1orf43Q9BWL3 253 aa4.39□□□□□ -1.71
CD44-204ENST00000279452 CTDSP1Q9GZU7 261 aa4.39□□□□□ -1.71
CD44-204ENST00000279452 HYDINQ4G0P3 5121 aa4.39□□□□□ -1.71
CD44-204ENST00000279452 TRBV6-5A0A0K0K1A5 114 aa4.38□□□□□ -1.71
CD44-204ENST00000279452 A0A1B0GVY2 172 aa4.38□□□□□ -1.71
CD44-204ENST00000279452 C7orf77A4D0Y5 90 aa4.38□□□□□ -1.71
CD44-204ENST00000279452 VCYO14598 125 aa4.38□□□□□ -1.71
CD44-204ENST00000279452 TNFRSF6BO95407 300 aa4.38□□□□□ -1.71
CD44-204ENST00000279452 RHEBQ15382 184 aa4.38□□□□□ -1.71
CD44-204ENST00000279452 Q6ZRN7 208 aaPredicted RBP4.38□□□□□ -1.71
CD44-204ENST00000279452 ORMDL3Q8N138 153 aa4.38□□□□□ -1.71
CD44-204ENST00000279452 LINC00269Q8N2A0 174 aa4.38□□□□□ -1.71
CD44-204ENST00000279452 CLRN3Q8NCR9 226 aa4.38□□□□□ -1.71
CD44-204ENST00000279452 TMEM101Q96IK0 257 aa4.38□□□□□ -1.71
CD44-204ENST00000279452 CARHSP1Q9Y2V2 147 aaKnown RBP4.38□□□□□ -1.71
CD44-204ENST00000279452 COX11Q9Y6N1 276 aa4.38□□□□□ -1.71
CD44-204ENST00000279452 DNAH1Q9P2D7 4330 aa4.37□□□□□ -1.71
CD44-204ENST00000279452 IGLV10-54A0A075B6I4 117 aa4.37□□□□□ -1.71
CD44-204ENST00000279452 A0A087WTM6 91 aa4.37□□□□□ -1.71
CD44-204ENST00000279452 TSHBP01222 138 aa4.37□□□□□ -1.71
CD44-204ENST00000279452 NPYP01303 97 aa4.37□□□□□ -1.71
CD44-204ENST00000279452 PPBPP02775 128 aa4.37□□□□□ -1.71
CD44-204ENST00000279452 FUSP35637 526 aaKnown RBP eCLIP4.37□□□□□ -1.71
CD44-204ENST00000279452 REG3AQ06141 175 aa4.37□□□□□ -1.71
CD44-204ENST00000279452 DGAT2L7PQ6IED9 249 aa4.37□□□□□ -1.71
CD44-204ENST00000279452 TMEM136Q6ZRR5 245 aa4.37□□□□□ -1.71
CD44-204ENST00000279452 SVBPQ8N300 66 aa4.37□□□□□ -1.71
CD44-204ENST00000279452 NRACQ8N912 160 aa4.37□□□□□ -1.71
CD44-204ENST00000279452 PRELID3AQ96N28 172 aa4.37□□□□□ -1.71
CD44-204ENST00000279452 IMMP2LQ96T52 175 aa4.37□□□□□ -1.71
CD44-204ENST00000279452 LYSTQ99698 3801 aa4.37□□□□□ -1.71
CD44-204ENST00000279452 IGLV4-60A0A075B6I1 120 aa4.36□□□□□ -1.71
CD44-204ENST00000279452 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.36□□□□□ -1.71
CD44-204ENST00000279452 LOC389332A0A1B0GUA5 103 aa4.36□□□□□ -1.71
CD44-204ENST00000279452 SNAPINO95295 136 aa4.36□□□□□ -1.71
CD44-204ENST00000279452 FGF6P10767 208 aa4.36□□□□□ -1.71
CD44-204ENST00000279452 RAB5AP20339 215 aa4.36□□□□□ -1.71
CD44-204ENST00000279452 KRTAP10-2P60368 255 aa4.36□□□□□ -1.71
CD44-204ENST00000279452 MIAQ16674 131 aa4.36□□□□□ -1.71
CD44-204ENST00000279452 C10orf91Q5T1B1 145 aa4.36□□□□□ -1.71
CD44-204ENST00000279452 ENHOQ6UWT2 76 aa4.36□□□□□ -1.71
CD44-204ENST00000279452 C20orf203Q8NBC4 194 aa4.36□□□□□ -1.71
CD44-204ENST00000279452 OR5A1Q8NGJ0 315 aa4.36□□□□□ -1.71
CD44-204ENST00000279452 BAALCQ8WXS3 180 aa4.36□□□□□ -1.71
CD44-204ENST00000279452 TMEM18Q96B42 140 aa4.36□□□□□ -1.71
CD44-204ENST00000279452 C20orf78Q9BR46 151 aa4.36□□□□□ -1.71
CD44-204ENST00000279452 SMIM2Q9BVW6 85 aa4.36□□□□□ -1.71
CD44-204ENST00000279452 MAP1LC3AQ9H492 121 aa4.36□□□□□ -1.71
CD44-204ENST00000279452 TRAV9-1A0A075B6T8 112 aa4.35□□□□□ -1.71
CD44-204ENST00000279452 IGLV5-52A0A0A0MRZ9 124 aa4.35□□□□□ -1.71
CD44-204ENST00000279452 TRBV27A0A0K0K1C4 114 aa4.35□□□□□ -1.71
CD44-204ENST00000279452 H7C423 109 aa4.35□□□□□ -1.71
CD44-204ENST00000279452 TCAPO15273 167 aa4.35□□□□□ -1.71
CD44-204ENST00000279452 ZNF25P17030 456 aaPredicted RBP4.35□□□□□ -1.71
CD44-204ENST00000279452 POLR2KP53803 58 aaKnown RBP4.35□□□□□ -1.71
CD44-204ENST00000279452 SMAGPQ0VAQ4 97 aa4.35□□□□□ -1.71
CD44-204ENST00000279452 KIAA1644Q3SXP7 199 aa4.35□□□□□ -1.71
CD44-204ENST00000279452 CFAP161Q6P656 301 aa4.35□□□□□ -1.71
CD44-204ENST00000279452 Q8N814 137 aa4.35□□□□□ -1.71
CD44-204ENST00000279452 VPS13DQ5THJ4 4388 aa4.35□□□□□ -1.71
CD44-204ENST00000279452 TRBV24-1A0A075B6N3 115 aa4.34□□□□□ -1.71
CD44-204ENST00000279452 A0A1B0GUV1 79 aa4.34□□□□□ -1.71
CD44-204ENST00000279452 PHOX2AO14813 284 aa4.34□□□□□ -1.71
CD44-204ENST00000279452 RNASE13Q5GAN3 156 aaKnown RBP4.34□□□□□ -1.71
CD44-204ENST00000279452 SLC7A5P1Q8MH63 180 aa4.34□□□□□ -1.71
CD44-204ENST00000279452 PGPEP1Q9NXJ5 209 aa4.34□□□□□ -1.71
CD44-204ENST00000279452 LAMTOR2Q9Y2Q5 125 aa4.34□□□□□ -1.71
CD44-204ENST00000279452 TGIF2-C20orf24A0A0A6YYL0 155 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms