RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 TOMM6Q96B49 74 aa12.21□□□□□ -0.45
UBR3-201ENST00000272793 ZNF883P0CG24 379 aa12.21□□□□□ -0.45
UBR3-201ENST00000272793 TTTY13Q9BZ97 58 aa12.21□□□□□ -0.46
UBR3-201ENST00000272793 Q6Q795 121 aa12.2□□□□□ -0.46
UBR3-201ENST00000272793 E9PLD3 99 aa12.2□□□□□ -0.46
UBR3-201ENST00000272793 IGLV3-32A0A0A0MS00 114 aa12.2□□□□□ -0.46
UBR3-201ENST00000272793 TRBV6-6A0A0A6YYG2 114 aa12.2□□□□□ -0.46
UBR3-201ENST00000272793 MIAQ16674 131 aa12.2□□□□□ -0.46
UBR3-201ENST00000272793 DNAJC9-AS1A6NH13 148 aa12.2□□□□□ -0.46
UBR3-201ENST00000272793 LINC00694P0DN24 101 aa12.19□□□□□ -0.46
UBR3-201ENST00000272793 VPREB3Q9UKI3 123 aa12.19□□□□□ -0.46
UBR3-201ENST00000272793 A6NDX4 124 aa12.19□□□□□ -0.46
UBR3-201ENST00000272793 MIFP14174 115 aa12.19□□□□□ -0.46
UBR3-201ENST00000272793 ATP5EP2Q5VTU8 51 aa12.19□□□□□ -0.46
UBR3-201ENST00000272793 TMEM105Q8N8V8 129 aa12.18□□□□□ -0.46
UBR3-201ENST00000272793 F8P00451 2351 aa12.18□□□□□ -0.46
UBR3-201ENST00000272793 PIEZO1Q92508 2521 aa12.18□□□□□ -0.46
UBR3-201ENST00000272793 IGKV2-28A0A075B6P5 120 aa12.18□□□□□ -0.46
UBR3-201ENST00000272793 IGKV2D-28P01615 120 aa12.18□□□□□ -0.46
UBR3-201ENST00000272793 IGLV3-12A0A075B6K2 115 aa12.17□□□□□ -0.46
UBR3-201ENST00000272793 NUPR1O60356 82 aa12.17□□□□□ -0.46
UBR3-201ENST00000272793 NDUFA11Q86Y39 141 aa12.17□□□□□ -0.46
UBR3-201ENST00000272793 UFSP1Q6NVU6 142 aa12.17□□□□□ -0.46
UBR3-201ENST00000272793 SPAG11AQ6PDA7 123 aa12.17□□□□□ -0.46
UBR3-201ENST00000272793 C11orf86A6NJI1 115 aa12.17□□□□□ -0.46
UBR3-201ENST00000272793 ESRGQ1W209 222 aa12.17□□□□□ -0.46
UBR3-201ENST00000272793 WT1-ASQ06250 92 aa12.17□□□□□ -0.46
UBR3-201ENST00000272793 C10orf91Q5T1B1 145 aa12.16□□□□□ -0.46
UBR3-201ENST00000272793 C11orf45Q8TAV5 145 aa12.16□□□□□ -0.46
UBR3-201ENST00000272793 CIRBP-AS1Q8TBR5 109 aa12.16□□□□□ -0.46
UBR3-201ENST00000272793 EBI3Q14213 229 aa12.16□□□□□ -0.46
UBR3-201ENST00000272793 TMEM89A2RUT3 159 aa12.16□□□□□ -0.46
UBR3-201ENST00000272793 DIAPH2-AS1Q14236 149 aa12.16□□□□□ -0.46
UBR3-201ENST00000272793 C2CD3Q4AC94 2353 aa12.15□□□□□ -0.46
UBR3-201ENST00000272793 IL17DQ8TAD2 202 aa12.15□□□□□ -0.46
UBR3-201ENST00000272793 BEAN1Q3B7T3 259 aa12.15□□□□□ -0.47
UBR3-201ENST00000272793 C2orf70A6NJV1 201 aa12.14□□□□□ -0.47
UBR3-201ENST00000272793 FLVCR1-AS1Q8TAF5 88 aa12.14□□□□□ -0.47
UBR3-201ENST00000272793 AGPAT4-IT1Q9H0P7 198 aa12.14□□□□□ -0.47
UBR3-201ENST00000272793 M0QXV9 152 aa12.14□□□□□ -0.47
UBR3-201ENST00000272793 CPAMD8Q8IZJ3 1885 aa12.13□□□□□ -0.47
UBR3-201ENST00000272793 AJUBAQ96IF1 538 aa12.13□□□□□ -0.47
UBR3-201ENST00000272793 SPATA12Q7Z6I5 190 aa12.13□□□□□ -0.47
UBR3-201ENST00000272793 C17orf58Q2M2W7 97 aa12.13□□□□□ -0.47
UBR3-201ENST00000272793 COL11A2P13942 1736 aaPredicted RBP12.13□□□□□ -0.47
UBR3-201ENST00000272793 CRYGAP11844 174 aa12.13□□□□□ -0.47
UBR3-201ENST00000272793 PRLHP81277 87 aa12.13□□□□□ -0.47
UBR3-201ENST00000272793 LENEPQ9Y5L5 61 aa12.13□□□□□ -0.47
UBR3-201ENST00000272793 SMAD5-AS1Q9Y6J3 95 aa12.13□□□□□ -0.47
UBR3-201ENST00000272793 HIGD1BQ9P298 99 aa12.12□□□□□ -0.47
UBR3-201ENST00000272793 THSD7AQ9UPZ6 1657 aa12.12□□□□□ -0.47
UBR3-201ENST00000272793 CFAP126Q5VTH2 177 aa12.12□□□□□ -0.47
UBR3-201ENST00000272793 CTRLP40313 264 aa12.12□□□□□ -0.47
UBR3-201ENST00000272793 Q6ZS49 121 aa12.12□□□□□ -0.47
UBR3-201ENST00000272793 CELA1Q9UNI1 258 aa12.12□□□□□ -0.47
UBR3-201ENST00000272793 MSRB1Q9NZV6 116 aa12.11□□□□□ -0.47
UBR3-201ENST00000272793 ZNF706Q9Y5V0 76 aaPredicted RBP12.11□□□□□ -0.47
UBR3-201ENST00000272793 SMIM26A0A096LP01 95 aa12.11□□□□□ -0.47
UBR3-201ENST00000272793 Q6ZQY7 126 aa12.11□□□□□ -0.47
UBR3-201ENST00000272793 REG3AQ06141 175 aa12.11□□□□□ -0.47
UBR3-201ENST00000272793 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.11□□□□□ -0.47
UBR3-201ENST00000272793 C5orf56Q8N8D9 126 aa12.11□□□□□ -0.47
UBR3-201ENST00000272793 TNS1Q9HBL0 1735 aaKnown RBP12.11□□□□□ -0.47
UBR3-201ENST00000272793 C10orf25Q5T742 122 aa12.1□□□□□ -0.47
UBR3-201ENST00000272793 CEMP1Q6PRD7 247 aaPredicted RBP12.09□□□□□ -0.47
UBR3-201ENST00000272793 H3BUA1 57 aa12.09□□□□□ -0.47
UBR3-201ENST00000272793 P0DMU3 169 aa12.09□□□□□ -0.47
UBR3-201ENST00000272793 FAM231AP0DMU4 169 aa12.09□□□□□ -0.47
UBR3-201ENST00000272793 FAM231CP0DMU5 169 aa12.09□□□□□ -0.47
UBR3-201ENST00000272793 TRBV6-1A0A0K0K1D8 114 aa12.08□□□□□ -0.47
UBR3-201ENST00000272793 RPL37AP8A6NKH3 93 aa12.08□□□□□ -0.47
UBR3-201ENST00000272793 LY6LH3BQJ8 138 aa12.08□□□□□ -0.48
UBR3-201ENST00000272793 CCDC179H3BU77 68 aa12.08□□□□□ -0.48
UBR3-201ENST00000272793 M0R2N4 97 aa12.08□□□□□ -0.48
UBR3-201ENST00000272793 ZFAND2AQ8N6M9 145 aa12.08□□□□□ -0.48
UBR3-201ENST00000272793 HIVEP2P31629 2446 aa12.07□□□□□ -0.48
UBR3-201ENST00000272793 ODF1Q14990 250 aa12.07□□□□□ -0.48
UBR3-201ENST00000272793 LINC00208Q96KT6 92 aa12.07□□□□□ -0.48
UBR3-201ENST00000272793 MDFICQ9P1T7 246 aa12.07□□□□□ -0.48
UBR3-201ENST00000272793 LY6G6EA0A0G2JKS1 128 aa12.06□□□□□ -0.48
UBR3-201ENST00000272793 IGLV2-18A0A075B6J9 118 aa12.06□□□□□ -0.48
UBR3-201ENST00000272793 IGHV7-81A0A0B4J1V7 117 aa12.06□□□□□ -0.48
UBR3-201ENST00000272793 VWCEQ96DN2 955 aa12.06□□□□□ -0.48
UBR3-201ENST00000272793 PRO0255Q9UI72 69 aa12.06□□□□□ -0.48
UBR3-201ENST00000272793 COX7CP15954 63 aa12.04□□□□□ -0.48
UBR3-201ENST00000272793 RNASE3P12724 160 aaKnown RBP12.04□□□□□ -0.48
UBR3-201ENST00000272793 CHCHD10Q8WYQ3 142 aaPredicted RBP12.04□□□□□ -0.48
UBR3-201ENST00000272793 A0A0J9YXY3 114 aa12.04□□□□□ -0.48
UBR3-201ENST00000272793 LOC100131303A0A0U1RQF7 123 aa12.03□□□□□ -0.48
UBR3-201ENST00000272793 PCOTHQ58A44 107 aa12.03□□□□□ -0.48
UBR3-201ENST00000272793 TRBV6-5A0A0K0K1A5 114 aa12.03□□□□□ -0.48
UBR3-201ENST00000272793 J3QKU1 62 aa12.03□□□□□ -0.48
UBR3-201ENST00000272793 TRBV10-1A0A0K0K1A3 114 aa12.03□□□□□ -0.48
UBR3-201ENST00000272793 CSRP1P21291 193 aaKnown RBP12.03□□□□□ -0.48
UBR3-201ENST00000272793 A8MZ25 164 aa12.02□□□□□ -0.49
UBR3-201ENST00000272793 Q8N976 141 aa12.02□□□□□ -0.49
UBR3-201ENST00000272793 ODF3L1Q8IXM7 274 aa12.02□□□□□ -0.49
UBR3-201ENST00000272793 CD59P13987 128 aa12.02□□□□□ -0.49
UBR3-201ENST00000272793 ZFP36P26651 326 aaKnown RBP12.01□□□□□ -0.49
UBR3-201ENST00000272793 B3GALT5-AS1P59052 145 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms