RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 A0A096LPF7 62 aa10.64□□□□□ -0.71
TNFRSF11A-201ENST00000269485 IGHV7-4-1A0A0J9YVY3 117 aa10.64□□□□□ -0.71
TNFRSF11A-201ENST00000269485 C2orf82Q6UX34 121 aa10.64□□□□□ -0.71
TNFRSF11A-201ENST00000269485 CITED2Q99967 270 aaPredicted RBP10.64□□□□□ -0.71
TNFRSF11A-201ENST00000269485 TMEM14CQ9P0S9 112 aa10.64□□□□□ -0.71
TNFRSF11A-201ENST00000269485 RHODO00212 210 aa10.64□□□□□ -0.71
TNFRSF11A-201ENST00000269485 LINC00694P0DN24 101 aa10.64□□□□□ -0.71
TNFRSF11A-201ENST00000269485 TMEM61Q8N0U2 210 aa10.64□□□□□ -0.71
TNFRSF11A-201ENST00000269485 ZNF876PQ49A33 203 aa10.63□□□□□ -0.71
TNFRSF11A-201ENST00000269485 TEX49A0A1B0GTD5 131 aa10.63□□□□□ -0.71
TNFRSF11A-201ENST00000269485 FAM236AA0A1B0GUQ0 79 aa10.63□□□□□ -0.71
TNFRSF11A-201ENST00000269485 FAM236BA0A1B0GV22 79 aa10.63□□□□□ -0.71
TNFRSF11A-201ENST00000269485 MORN3Q6PF18 240 aaPredicted RBP10.63□□□□□ -0.71
TNFRSF11A-201ENST00000269485 PLEKHB2Q96CS7 222 aa10.63□□□□□ -0.71
TNFRSF11A-201ENST00000269485 CD28P10747 220 aa10.62□□□□□ -0.71
TNFRSF11A-201ENST00000269485 LAGE3Q14657 143 aa10.62□□□□□ -0.71
TNFRSF11A-201ENST00000269485 C5orf47Q569G3 176 aa10.62□□□□□ -0.71
TNFRSF11A-201ENST00000269485 ATP6V0E2Q8NHE4 81 aa10.62□□□□□ -0.71
TNFRSF11A-201ENST00000269485 TRAV21A0A0B4J279 112 aa10.61□□□□□ -0.71
TNFRSF11A-201ENST00000269485 PROK1P58294 105 aa10.61□□□□□ -0.71
TNFRSF11A-201ENST00000269485 TAL2Q16559 108 aa10.61□□□□□ -0.71
TNFRSF11A-201ENST00000269485 OPRPNQ99935 248 aaPredicted RBP10.61□□□□□ -0.71
TNFRSF11A-201ENST00000269485 FAM223BA6NKX1 122 aa10.61□□□□□ -0.71
TNFRSF11A-201ENST00000269485 PLA2G2AP14555 144 aa10.61□□□□□ -0.71
TNFRSF11A-201ENST00000269485 FAM223AQ8IWN6 122 aa10.61□□□□□ -0.71
TNFRSF11A-201ENST00000269485 H7C1H1 209 aa10.61□□□□□ -0.71
TNFRSF11A-201ENST00000269485 IGHG4P01861 327 aa10.61□□□□□ -0.71
TNFRSF11A-201ENST00000269485 LGALS3P17931 250 aaKnown RBP10.6□□□□□ -0.71
TNFRSF11A-201ENST00000269485 PLNP26678 52 aa10.6□□□□□ -0.71
TNFRSF11A-201ENST00000269485 PDE6HQ13956 83 aa10.6□□□□□ -0.71
TNFRSF11A-201ENST00000269485 INAFM1C9JVW0 142 aa10.6□□□□□ -0.71
TNFRSF11A-201ENST00000269485 C9orf139Q6ZV77 190 aa10.6□□□□□ -0.71
TNFRSF11A-201ENST00000269485 NDUFA4O00483 81 aa10.6□□□□□ -0.71
TNFRSF11A-201ENST00000269485 MRPS12O15235 138 aaKnown RBP10.6□□□□□ -0.71
TNFRSF11A-201ENST00000269485 DSCR9P59020 149 aa10.6□□□□□ -0.71
TNFRSF11A-201ENST00000269485 Q8N1Y9 231 aa10.6□□□□□ -0.71
TNFRSF11A-201ENST00000269485 OR13C6PQ8NH95 151 aa10.6□□□□□ -0.71
TNFRSF11A-201ENST00000269485 TMEM190Q8WZ59 177 aa10.6□□□□□ -0.71
TNFRSF11A-201ENST00000269485 USMG5Q96IX5 58 aa10.6□□□□□ -0.71
TNFRSF11A-201ENST00000269485 H3BMM0 161 aa10.59□□□□□ -0.71
TNFRSF11A-201ENST00000269485 DEFB130BP0DP73 79 aa10.59□□□□□ -0.71
TNFRSF11A-201ENST00000269485 DEFB130AP0DP74 79 aa10.59□□□□□ -0.71
TNFRSF11A-201ENST00000269485 UBE2WQ96B02 151 aa10.59□□□□□ -0.71
TNFRSF11A-201ENST00000269485 RPL39P62891 51 aaKnown RBP10.59□□□□□ -0.71
TNFRSF11A-201ENST00000269485 PRO1854Q9UHT4 67 aa10.59□□□□□ -0.71
TNFRSF11A-201ENST00000269485 TRGV1A0A0A0MS02 117 aa10.58□□□□□ -0.72
TNFRSF11A-201ENST00000269485 DNAJC9-AS1A6NH13 148 aa10.58□□□□□ -0.72
TNFRSF11A-201ENST00000269485 LGALS1P09382 135 aaKnown RBP10.58□□□□□ -0.72
TNFRSF11A-201ENST00000269485 ADARB2-AS1A8MUL3 147 aa10.58□□□□□ -0.72
TNFRSF11A-201ENST00000269485 CEMP1Q6PRD7 247 aaPredicted RBP10.58□□□□□ -0.72
TNFRSF11A-201ENST00000269485 LYPD1Q8N2G4 141 aa10.58□□□□□ -0.72
TNFRSF11A-201ENST00000269485 STHQ8IWL8 128 aa10.57□□□□□ -0.72
TNFRSF11A-201ENST00000269485 TRAV8-3A0A0A6YYJ7 113 aa10.57□□□□□ -0.72
TNFRSF11A-201ENST00000269485 F8VRH5 84 aa10.57□□□□□ -0.72
TNFRSF11A-201ENST00000269485 DGAT2L7PQ6IED9 249 aa10.57□□□□□ -0.72
TNFRSF11A-201ENST00000269485 GAGE2AQ6NT46 116 aa10.57□□□□□ -0.72
TNFRSF11A-201ENST00000269485 TRGV11A0A075B6L2 103 aa10.57□□□□□ -0.72
TNFRSF11A-201ENST00000269485 A0A087WX48 190 aa10.57□□□□□ -0.72
TNFRSF11A-201ENST00000269485 COX6CP09669 75 aa10.56□□□□□ -0.72
TNFRSF11A-201ENST00000269485 CSDC2Q9Y534 153 aaKnown RBP10.56□□□□□ -0.72
TNFRSF11A-201ENST00000269485 TMEM101Q96IK0 257 aa10.56□□□□□ -0.72
TNFRSF11A-201ENST00000269485 ZNF625Q96I27 306 aaPredicted RBP10.55□□□□□ -0.72
TNFRSF11A-201ENST00000269485 SPXQ9BT56 116 aa10.55□□□□□ -0.72
TNFRSF11A-201ENST00000269485 TMEM126AQ9H061 195 aa10.55□□□□□ -0.72
TNFRSF11A-201ENST00000269485 TRGV2A0A075B6R0 118 aa10.54□□□□□ -0.72
TNFRSF11A-201ENST00000269485 Q6ZSV7 163 aa10.54□□□□□ -0.72
TNFRSF11A-201ENST00000269485 SMIM9A6NGZ8 99 aa10.54□□□□□ -0.72
TNFRSF11A-201ENST00000269485 ATXN8Q156A1 80 aa10.54□□□□□ -0.72
TNFRSF11A-201ENST00000269485 NDUFA11Q86Y39 141 aa10.54□□□□□ -0.72
TNFRSF11A-201ENST00000269485 TRBV7-3A0A075B6L6 115 aa10.53□□□□□ -0.72
TNFRSF11A-201ENST00000269485 OVOL1O14753 267 aa10.53□□□□□ -0.72
TNFRSF11A-201ENST00000269485 HERVK_113P63121 156 aa10.53□□□□□ -0.72
TNFRSF11A-201ENST00000269485 ZNF493Q6ZR52 646 aa10.53□□□□□ -0.72
TNFRSF11A-201ENST00000269485 LINC01619G3V211 115 aa10.53□□□□□ -0.72
TNFRSF11A-201ENST00000269485 Q8N8P6 123 aa10.53□□□□□ -0.72
TNFRSF11A-201ENST00000269485 GATD1Q8NB37 220 aa10.53□□□□□ -0.72
TNFRSF11A-201ENST00000269485 C11orf68Q9H3H3 251 aaKnown RBP10.53□□□□□ -0.72
TNFRSF11A-201ENST00000269485 A4D1N5 150 aa10.52□□□□□ -0.72
TNFRSF11A-201ENST00000269485 CCL24O00175 119 aa10.52□□□□□ -0.72
TNFRSF11A-201ENST00000269485 FAM19A5Q7Z5A7 132 aaPredicted RBP10.52□□□□□ -0.72
TNFRSF11A-201ENST00000269485 C1orf43Q9BWL3 253 aa10.52□□□□□ -0.72
TNFRSF11A-201ENST00000269485 Q9UF83 564 aa10.52□□□□□ -0.72
TNFRSF11A-201ENST00000269485 J3KT08 172 aa10.51□□□□□ -0.73
TNFRSF11A-201ENST00000269485 GPHB5Q86YW7 130 aa10.51□□□□□ -0.73
TNFRSF11A-201ENST00000269485 ZNF702PQ9H963 129 aa10.51□□□□□ -0.73
TNFRSF11A-201ENST00000269485 KMT2BQ9UMN6 2715 aaPredicted RBP10.51□□□□□ -0.73
TNFRSF11A-201ENST00000269485 LINC00482Q8N8I6 264 aa10.51□□□□□ -0.73
TNFRSF11A-201ENST00000269485 LINC01620Q4KN68 170 aa10.51□□□□□ -0.73
TNFRSF11A-201ENST00000269485 PRB2P02812 416 aaPredicted RBP10.5□□□□□ -0.73
TNFRSF11A-201ENST00000269485 PSMB8P28062 276 aa10.5□□□□□ -0.73
TNFRSF11A-201ENST00000269485 C2orf66Q6UXQ4 117 aa10.5□□□□□ -0.73
TNFRSF11A-201ENST00000269485 ZFAND2AQ8N6M9 145 aa10.5□□□□□ -0.73
TNFRSF11A-201ENST00000269485 CFC1BP0CG36 223 aa10.5□□□□□ -0.73
TNFRSF11A-201ENST00000269485 CFC1P0CG37 223 aa10.5□□□□□ -0.73
TNFRSF11A-201ENST00000269485 SDHAF1A6NFY7 115 aa10.5□□□□□ -0.73
TNFRSF11A-201ENST00000269485 TP53TG1Q9Y2A0 90 aa10.5□□□□□ -0.73
TNFRSF11A-201ENST00000269485 CLPSL2Q6UWE3 100 aa10.49□□□□□ -0.73
TNFRSF11A-201ENST00000269485 Q6YL49 198 aa10.49□□□□□ -0.73
TNFRSF11A-201ENST00000269485 DUSP14O95147 198 aaKnown RBP10.49□□□□□ -0.73
TNFRSF11A-201ENST00000269485 RNF185Q96GF1 192 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms