RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 I3L3M4 83 aa12.55□□□□□ -0.4
SPG7-201ENST00000268704 A8MZ25 164 aa12.54□□□□□ -0.4
SPG7-201ENST00000268704 ATP5J2P56134 94 aa12.54□□□□□ -0.4
SPG7-201ENST00000268704 GAGE5Q13069 117 aa12.54□□□□□ -0.4
SPG7-201ENST00000268704 GAGE6Q13070 117 aa12.54□□□□□ -0.4
SPG7-201ENST00000268704 KNCNA6PVL3 124 aa12.54□□□□□ -0.4
SPG7-201ENST00000268704 MSMBP08118 114 aa12.54□□□□□ -0.4
SPG7-201ENST00000268704 NHLRC4P0CG21 123 aaPredicted RBP12.54□□□□□ -0.4
SPG7-201ENST00000268704 POLQO75417 2590 aa12.54□□□□□ -0.4
SPG7-201ENST00000268704 CHD6Q8TD26 2715 aa12.54□□□□□ -0.4
SPG7-201ENST00000268704 K7EQG2 157 aa12.53□□□□□ -0.4
SPG7-201ENST00000268704 NPC2P61916 151 aa12.53□□□□□ -0.4
SPG7-201ENST00000268704 MXRA5Q9NR99 2828 aa12.53□□□□□ -0.4
SPG7-201ENST00000268704 A0A0J9YXY3 114 aa12.53□□□□□ -0.4
SPG7-201ENST00000268704 FAM104AQ969W3 186 aa12.53□□□□□ -0.4
SPG7-201ENST00000268704 IGHV3-30-3P0DP02 117 aa12.53□□□□□ -0.4
SPG7-201ENST00000268704 CD28P10747 220 aa12.53□□□□□ -0.4
SPG7-201ENST00000268704 BBC3Q96PG8 261 aaPredicted RBP12.52□□□□□ -0.4
SPG7-201ENST00000268704 USP9XQ93008 2570 aaPredicted RBP12.52□□□□□ -0.41
SPG7-201ENST00000268704 Q6ZSV7 163 aa12.52□□□□□ -0.41
SPG7-201ENST00000268704 NRGNQ92686 78 aa12.52□□□□□ -0.41
SPG7-201ENST00000268704 PRSS2P07478 247 aa12.51□□□□□ -0.41
SPG7-201ENST00000268704 M0R2P5 195 aa12.51□□□□□ -0.41
SPG7-201ENST00000268704 CFAP161Q6P656 301 aa12.51□□□□□ -0.41
SPG7-201ENST00000268704 DEFB112Q30KQ8 113 aa12.5□□□□□ -0.41
SPG7-201ENST00000268704 ODF3Q96PU9 254 aa12.5□□□□□ -0.41
SPG7-201ENST00000268704 A0A0B4J2C4 111 aa12.5□□□□□ -0.41
SPG7-201ENST00000268704 ADAMTSL4-AS1Q5T5F5 129 aa12.5□□□□□ -0.41
SPG7-201ENST00000268704 TIMM21Q9BVV7 248 aa12.5□□□□□ -0.41
SPG7-201ENST00000268704 NTN5Q8WTR8 489 aaPredicted RBP12.49□□□□□ -0.41
SPG7-201ENST00000268704 PRB1P04280 392 aa12.49□□□□□ -0.41
SPG7-201ENST00000268704 LITAFQ99732 161 aa12.49□□□□□ -0.41
SPG7-201ENST00000268704 TLN2Q9Y4G6 2542 aa12.48□□□□□ -0.41
SPG7-201ENST00000268704 TRIAP1O43715 76 aa12.48□□□□□ -0.41
SPG7-201ENST00000268704 Q6ZSN1 163 aa12.48□□□□□ -0.41
SPG7-201ENST00000268704 MAPK1IP1LQ8NDC0 245 aa12.48□□□□□ -0.41
SPG7-201ENST00000268704 MYO9AB2RTY4 2548 aa12.48□□□□□ -0.41
SPG7-201ENST00000268704 GAGE2BQ13066 116 aa12.47□□□□□ -0.41
SPG7-201ENST00000268704 GAGE2EQ4V326 116 aa12.47□□□□□ -0.41
SPG7-201ENST00000268704 GAGE2DQ9UEU5 116 aa12.47□□□□□ -0.41
SPG7-201ENST00000268704 TEX49A0A1B0GTD5 131 aa12.47□□□□□ -0.41
SPG7-201ENST00000268704 FAM208BQ5VWN6 2430 aa12.47□□□□□ -0.41
SPG7-201ENST00000268704 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.46□□□□□ -0.41
SPG7-201ENST00000268704 IGKV2-29A2NJV5 120 aaPredicted RBP12.46□□□□□ -0.41
SPG7-201ENST00000268704 DEFB136Q30KP8 78 aa12.46□□□□□ -0.41
SPG7-201ENST00000268704 LINC01620Q4KN68 170 aa12.46□□□□□ -0.41
SPG7-201ENST00000268704 IGHV3-38A0A0C4DH36 116 aa12.46□□□□□ -0.41
SPG7-201ENST00000268704 HOXD3P31249 432 aaPredicted RBP12.46□□□□□ -0.41
SPG7-201ENST00000268704 HIST2H2BDQ6DRA6 164 aa12.46□□□□□ -0.42
SPG7-201ENST00000268704 SNCGO76070 127 aa12.45□□□□□ -0.42
SPG7-201ENST00000268704 TTC32Q5I0X7 151 aa12.45□□□□□ -0.42
SPG7-201ENST00000268704 DAND5Q8N907 189 aa12.45□□□□□ -0.42
SPG7-201ENST00000268704 TRGV11A0A075B6L2 103 aa12.45□□□□□ -0.42
SPG7-201ENST00000268704 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.45□□□□□ -0.42
SPG7-201ENST00000268704 NDUFV3P56181 108 aaKnown RBP12.45□□□□□ -0.42
SPG7-201ENST00000268704 MRPS36P82909 103 aaKnown RBP12.45□□□□□ -0.42
SPG7-201ENST00000268704 C18orf65Q6ZTR6 163 aa12.45□□□□□ -0.42
SPG7-201ENST00000268704 NDUFA12Q9UI09 145 aa12.45□□□□□ -0.42
SPG7-201ENST00000268704 ANKRD17O75179 2603 aaKnown RBP12.45□□□□□ -0.42
SPG7-201ENST00000268704 ATXN8Q156A1 80 aa12.44□□□□□ -0.42
SPG7-201ENST00000268704 PTPN13Q12923 2485 aa12.44□□□□□ -0.42
SPG7-201ENST00000268704 TNFRSF18Q9Y5U5 241 aa12.44□□□□□ -0.42
SPG7-201ENST00000268704 DEFB131AP59861 70 aa12.43□□□□□ -0.42
SPG7-201ENST00000268704 WNK1Q9H4A3 2382 aa12.43□□□□□ -0.42
SPG7-201ENST00000268704 RBMY1BA6NDE4 496 aaKnown RBP12.43□□□□□ -0.42
SPG7-201ENST00000268704 RBMY1EA6NEQ0 496 aaKnown RBP12.43□□□□□ -0.42
SPG7-201ENST00000268704 RBMY1DP0C7P1 496 aaKnown RBP12.43□□□□□ -0.42
SPG7-201ENST00000268704 DOPEY1Q5JWR5 2465 aa12.43□□□□□ -0.42
SPG7-201ENST00000268704 B4DSR2 109 aa12.43□□□□□ -0.42
SPG7-201ENST00000268704 MYO18BQ8IUG5 2567 aa12.43□□□□□ -0.42
SPG7-201ENST00000268704 IGHV1-58A0A0C4DH39 117 aa12.42□□□□□ -0.42
SPG7-201ENST00000268704 CLEC2BQ92478 149 aa12.42□□□□□ -0.42
SPG7-201ENST00000268704 DUX3Q96PT4 197 aa12.42□□□□□ -0.42
SPG7-201ENST00000268704 GAGE12JA6NER3 117 aa12.42□□□□□ -0.42
SPG7-201ENST00000268704 GAGE7O76087 117 aa12.42□□□□□ -0.42
SPG7-201ENST00000268704 GAGE12FP0CL80 117 aa12.42□□□□□ -0.42
SPG7-201ENST00000268704 GAGE12GP0CL81 117 aa12.42□□□□□ -0.42
SPG7-201ENST00000268704 GAGE12IP0CL82 117 aa12.42□□□□□ -0.42
SPG7-201ENST00000268704 GAGE4Q13068 117 aa12.42□□□□□ -0.42
SPG7-201ENST00000268704 ZNF462Q96JM2 2506 aa12.42□□□□□ -0.42
SPG7-201ENST00000268704 AKAP9Q99996 3911 aa12.41□□□□□ -0.42
SPG7-201ENST00000268704 SLURP1P55000 103 aa12.41□□□□□ -0.42
SPG7-201ENST00000268704 CHCHD7Q9BUK0 85 aa12.41□□□□□ -0.42
SPG7-201ENST00000268704 PYGO1Q9Y3Y4 419 aa12.41□□□□□ -0.42
SPG7-201ENST00000268704 FBN2P35556 2912 aa12.41□□□□□ -0.42
SPG7-201ENST00000268704 LINC00467Q9BRT7 94 aa12.41□□□□□ -0.42
SPG7-201ENST00000268704 ICOSQ9Y6W8 199 aa12.41□□□□□ -0.42
SPG7-201ENST00000268704 TMEM262E9PQX1 116 aa12.41□□□□□ -0.42
SPG7-201ENST00000268704 VSIG2Q96IQ7 327 aa12.41□□□□□ -0.42
SPG7-201ENST00000268704 CITED1Q99966 193 aa12.41□□□□□ -0.42
SPG7-201ENST00000268704 ZNF843Q8N446 348 aa12.4□□□□□ -0.42
SPG7-201ENST00000268704 UBE2D4Q9Y2X8 147 aa12.4□□□□□ -0.42
SPG7-201ENST00000268704 TRBV30A0A0K0K1B3 111 aa12.4□□□□□ -0.42
SPG7-201ENST00000268704 TRBV10-2A0A0K0K1G8 114 aa12.38□□□□□ -0.43
SPG7-201ENST00000268704 MIAQ16674 131 aa12.38□□□□□ -0.43
SPG7-201ENST00000268704 C15orf53Q8NAA6 179 aa12.38□□□□□ -0.43
SPG7-201ENST00000268704 IFITM1P13164 125 aa12.38□□□□□ -0.43
SPG7-201ENST00000268704 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.38□□□□□ -0.43
SPG7-201ENST00000268704 CDKN2A-AS1Q9UH64 79 aa12.38□□□□□ -0.43
SPG7-201ENST00000268704 H7C423 109 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms