RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 PRB1P04280 392 aa12.17□□□□□ -0.46
GPC1-201ENST00000264039 POLQO75417 2590 aa12.17□□□□□ -0.46
GPC1-201ENST00000264039 PKD1L2Q7Z442 2459 aa12.17□□□□□ -0.46
GPC1-201ENST00000264039 UQCRQO14949 82 aa12.17□□□□□ -0.46
GPC1-201ENST00000264039 CRPP02741 224 aa12.17□□□□□ -0.46
GPC1-201ENST00000264039 IGLV4-3A0A075B6K6 122 aa12.16□□□□□ -0.46
GPC1-201ENST00000264039 POLR2KP53803 58 aaKnown RBP12.16□□□□□ -0.46
GPC1-201ENST00000264039 FAM19A5Q7Z5A7 132 aaPredicted RBP12.16□□□□□ -0.46
GPC1-201ENST00000264039 LINC01587Q99440 93 aa12.16□□□□□ -0.46
GPC1-201ENST00000264039 ABCA2Q9BZC7 2435 aa12.16□□□□□ -0.46
GPC1-201ENST00000264039 COX8CQ7Z4L0 72 aa12.16□□□□□ -0.46
GPC1-201ENST00000264039 MINOS1-NBL1R4GNA1 71 aa12.16□□□□□ -0.46
GPC1-201ENST00000264039 ZFP36P26651 326 aaKnown RBP12.16□□□□□ -0.46
GPC1-201ENST00000264039 PAX4O43316 350 aa12.15□□□□□ -0.46
GPC1-201ENST00000264039 PFN2P35080 140 aa12.15□□□□□ -0.46
GPC1-201ENST00000264039 PSMG3-AS1Q96PY0 264 aa12.15□□□□□ -0.46
GPC1-201ENST00000264039 DSCR8Q96T75 97 aa12.15□□□□□ -0.46
GPC1-201ENST00000264039 C14orf132Q9NPU4 83 aa12.15□□□□□ -0.46
GPC1-201ENST00000264039 LENEPQ9Y5L5 61 aa12.15□□□□□ -0.46
GPC1-201ENST00000264039 IGHV1OR15-1A0A075B7D0 117 aa12.15□□□□□ -0.46
GPC1-201ENST00000264039 H3BUX3 64 aa12.15□□□□□ -0.46
GPC1-201ENST00000264039 Q6Q795 121 aa12.15□□□□□ -0.46
GPC1-201ENST00000264039 LINC00643Q86TS7 51 aa12.15□□□□□ -0.46
GPC1-201ENST00000264039 CDKN2A-AS1Q9UH64 79 aa12.15□□□□□ -0.46
GPC1-201ENST00000264039 MRPL53Q96EL3 112 aaKnown RBP12.14□□□□□ -0.47
GPC1-201ENST00000264039 IGHV1-58A0A0C4DH39 117 aa12.14□□□□□ -0.47
GPC1-201ENST00000264039 LINC01546A6NGU7 62 aa12.14□□□□□ -0.47
GPC1-201ENST00000264039 ATP5G1P05496 136 aa12.14□□□□□ -0.47
GPC1-201ENST00000264039 MIAQ16674 131 aa12.14□□□□□ -0.47
GPC1-201ENST00000264039 POM121L12Q8N7R1 296 aa12.14□□□□□ -0.47
GPC1-201ENST00000264039 C5orf47Q569G3 176 aa12.14□□□□□ -0.47
GPC1-201ENST00000264039 IGFL2Q6UWQ7 119 aa12.14□□□□□ -0.47
GPC1-201ENST00000264039 BPESC1Q9GZL8 116 aa12.14□□□□□ -0.47
GPC1-201ENST00000264039 IGHV4-4A0A075B6R2 117 aa12.13□□□□□ -0.47
GPC1-201ENST00000264039 LST1O00453 97 aa12.13□□□□□ -0.47
GPC1-201ENST00000264039 INAFM2P0DMQ5 153 aa12.13□□□□□ -0.47
GPC1-201ENST00000264039 ZNF575Q86XF7 245 aa12.13□□□□□ -0.47
GPC1-201ENST00000264039 RNF152Q8N8N0 203 aa12.13□□□□□ -0.47
GPC1-201ENST00000264039 ITLN2Q8WWU7 325 aaPredicted RBP12.13□□□□□ -0.47
GPC1-201ENST00000264039 UBE2L6O14933 153 aa12.13□□□□□ -0.47
GPC1-201ENST00000264039 CSDC2Q9Y534 153 aaKnown RBP12.13□□□□□ -0.47
GPC1-201ENST00000264039 A0A087WVE0 104 aa12.13□□□□□ -0.47
GPC1-201ENST00000264039 SBSPONQ8IVN8 264 aa12.13□□□□□ -0.47
GPC1-201ENST00000264039 ASH1LQ9NR48 2969 aaKnown RBP12.13□□□□□ -0.47
GPC1-201ENST00000264039 TNFRSF13BO14836 293 aaPredicted RBP12.12□□□□□ -0.47
GPC1-201ENST00000264039 BLCAPP62952 87 aa12.12□□□□□ -0.47
GPC1-201ENST00000264039 MOB4Q9Y3A3 225 aa12.12□□□□□ -0.47
GPC1-201ENST00000264039 EDN2P20800 178 aa12.12□□□□□ -0.47
GPC1-201ENST00000264039 PIK3CD-AS1Q5SR53 167 aa12.12□□□□□ -0.47
GPC1-201ENST00000264039 TMEM61Q8N0U2 210 aa12.12□□□□□ -0.47
GPC1-201ENST00000264039 SMIM9A6NGZ8 99 aa12.11□□□□□ -0.47
GPC1-201ENST00000264039 HIVEP3Q5T1R4 2406 aa12.11□□□□□ -0.47
GPC1-201ENST00000264039 MUC4Q99102 2169 aa12.11□□□□□ -0.47
GPC1-201ENST00000264039 DNAJC30Q96LL9 226 aa12.11□□□□□ -0.47
GPC1-201ENST00000264039 SPTBN4Q9H254 2564 aa12.11□□□□□ -0.47
GPC1-201ENST00000264039 CENPEQ02224 2701 aa12.11□□□□□ -0.47
GPC1-201ENST00000264039 M0QY20 66 aa12.1□□□□□ -0.47
GPC1-201ENST00000264039 ACYP1P07311 99 aa12.1□□□□□ -0.47
GPC1-201ENST00000264039 PIEZO1Q92508 2521 aa12.1□□□□□ -0.47
GPC1-201ENST00000264039 BRI3O95415 125 aa12.1□□□□□ -0.47
GPC1-201ENST00000264039 HRCT1Q6UXD1 115 aa12.1□□□□□ -0.47
GPC1-201ENST00000264039 NDUFA4O00483 81 aa12.1□□□□□ -0.47
GPC1-201ENST00000264039 TRBV27A0A0K0K1C4 114 aa12.09□□□□□ -0.47
GPC1-201ENST00000264039 COPS9Q8WXC6 57 aa12.09□□□□□ -0.47
GPC1-201ENST00000264039 UBE2E2Q96LR5 201 aa12.09□□□□□ -0.47
GPC1-201ENST00000264039 NAV2Q8IVL1 2488 aa12.09□□□□□ -0.47
GPC1-201ENST00000264039 C1orf43Q9BWL3 253 aa12.09□□□□□ -0.47
GPC1-201ENST00000264039 TIRAPP58753 221 aa12.08□□□□□ -0.48
GPC1-201ENST00000264039 ATOX1O00244 68 aa12.08□□□□□ -0.48
GPC1-201ENST00000264039 DEFB131AP59861 70 aa12.08□□□□□ -0.48
GPC1-201ENST00000264039 ZFYVE26Q68DK2 2539 aa12.08□□□□□ -0.48
GPC1-201ENST00000264039 IGHV1-69P01742 117 aa12.08□□□□□ -0.48
GPC1-201ENST00000264039 C10orf105Q8TEF2 133 aa12.08□□□□□ -0.48
GPC1-201ENST00000264039 HIVEP2P31629 2446 aa12.08□□□□□ -0.48
GPC1-201ENST00000264039 SLPIP03973 132 aa12.07□□□□□ -0.48
GPC1-201ENST00000264039 LAMA5O15230 3695 aa12.07□□□□□ -0.48
GPC1-201ENST00000264039 EIF4EBP3O60516 100 aaPredicted RBP12.07□□□□□ -0.48
GPC1-201ENST00000264039 VSIG2Q96IQ7 327 aa12.07□□□□□ -0.48
GPC1-201ENST00000264039 FAM223BA6NKX1 122 aa12.07□□□□□ -0.48
GPC1-201ENST00000264039 FAM223AQ8IWN6 122 aa12.07□□□□□ -0.48
GPC1-201ENST00000264039 TRAV23DV6A0A075B6W5 121 aa12.06□□□□□ -0.48
GPC1-201ENST00000264039 IGHV4OR15-8A0A075B7B6 117 aa12.06□□□□□ -0.48
GPC1-201ENST00000264039 A0A087WW49 117 aa12.06□□□□□ -0.48
GPC1-201ENST00000264039 SPENQ96T58 3664 aaKnown RBP12.06□□□□□ -0.48
GPC1-201ENST00000264039 TRGV1A0A0A0MS02 117 aa12.06□□□□□ -0.48
GPC1-201ENST00000264039 WFDC9Q8NEX5 89 aa12.06□□□□□ -0.48
GPC1-201ENST00000264039 NOTCH2Q04721 2471 aa12.05□□□□□ -0.48
GPC1-201ENST00000264039 COX7A2LO14548 114 aa12.05□□□□□ -0.48
GPC1-201ENST00000264039 COX7CP15954 63 aa12.05□□□□□ -0.48
GPC1-201ENST00000264039 SOCS3O14543 225 aa12.05□□□□□ -0.48
GPC1-201ENST00000264039 RPL36AP83881 106 aaKnown RBP12.05□□□□□ -0.48
GPC1-201ENST00000264039 RPL36ALQ969Q0 106 aaKnown RBP12.05□□□□□ -0.48
GPC1-201ENST00000264039 LECT2O14960 151 aa12.04□□□□□ -0.48
GPC1-201ENST00000264039 KIR2DL5BQ8NHK3 375 aa12.04□□□□□ -0.48
GPC1-201ENST00000264039 LINC00308Q8TCZ7 52 aa12.04□□□□□ -0.48
GPC1-201ENST00000264039 DYNLRB2Q8TF09 96 aa12.04□□□□□ -0.48
GPC1-201ENST00000264039 ODF3BA8MYP8 253 aa12.04□□□□□ -0.48
GPC1-201ENST00000264039 CFHR3Q02985 330 aa12.04□□□□□ -0.48
GPC1-201ENST00000264039 NRGNQ92686 78 aa12.03□□□□□ -0.48
GPC1-201ENST00000264039 LINC00467Q9BRT7 94 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms